BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3352188 =	117 (1.020)	8 (0.070)	7/232	NT	7.6%	intergenic (+35/+107)	PP_2947/PP_2948	transcriptional regulator MvaT/GntR family transcriptional regulator
*	?	NC_002947	3352244 =	83 (0.760)	8 (0.070)	7/232	NT	7.6%	intergenic (+91/+51)	PP_2947/PP_2948	transcriptional regulator MvaT/GntR family transcriptional regulator

Only 100 of 147 total aligned reads displayed.

GTACAAGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGG  >  NC_002947/3352039‑3352335

gccagtcgatggctgggggtgatttcctccggttcaatgtcgcccaatcggctgatggcaaaatttatgaagtattgaaacggacactgagcgcttagtggcgaaacttccggtttaaccaagtcagctcattccgcccaccaacgatga                                                                                                                                                     <  2:1210599‑M1/1‑1 (MQ=255)

gccagtcgatggctgcgggtgatttcctccgtttcaatgtcgcccaatcggctgatgccaaaatttacgaagtattgaaacggacactgagcgcttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatga                                                                                                                                                     <  1:2728324‑M1/1‑1 (MQ=255)

 tACAAGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATTTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    >  1:2053813/1‑150 (MQ=255)

 tACAAGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    <  1:2191490/150‑1 (MQ=255)

 tACAAGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    >  1:2768537/1‑150 (MQ=255)

    aaGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGc                                                                                                                                                 >  2:2387608/1‑150 (MQ=255)

     aGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGcc                                                                                                                                                <  1:749703/150‑1 (MQ=255)

       aaCCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGATGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCtt                                                                                                                                              <  2:431562/150‑1 (MQ=255)

          ccGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    >  2:1370751/1‑141 (MQ=255)

          ccGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    <  1:1370751/141‑1 (MQ=255)

              aTAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCttt                                                                                                                                       <  1:2645277/150‑1 (MQ=255)

               tAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCtttt                                                                                                                                      <  1:591947/150‑1 (MQ=255)

                aaTGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCttttt                                                                                                                                     >  2:1659180/1‑150 (MQ=255)

                aaTGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCttttt                                                                                                                                     <  1:3018904/150‑1 (MQ=255)

                 aTGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTc                                                                                                                                    <  2:1462937/150‑1 (MQ=255)

                   ggAGAGGTCATCGACACCAAGGGACGTGTGCTCAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  <  1:835/150‑1 (MQ=255)

                    gagaGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAg                                                                                                                                 <  2:2768537/150‑1 (MQ=255)

                      tttcctccgtttcaatgtcgcccaatcggctgatgccaaaatttacgaagtattgaaacggacactgagcgcttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatgAAc                                                                                                                                                   <  2:597231‑M1/3‑1 (MQ=255)

                      tttcctccgtttcaatgtcgcccaatcggctgatgccaaaatttacgaagtattgaaacggacactgagcgcttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatgAAc                                                                                                                                                   >  1:597231‑M1/128‑130 (MQ=255)

                          tCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCg                                                                                                                           >  1:105168/1‑150 (MQ=255)

                            aTCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    >  1:1030984/1‑123 (MQ=255)

                            aTCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGaaa                                                                                                                                                    <  2:1030984/123‑1 (MQ=255)

                            aTCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGAc                                                                                                                         >  1:510902/1‑150 (MQ=255)

                             tCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGGCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  >  2:2059277/1‑140 (MQ=255)

                             tCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  <  1:2059277/140‑1 (MQ=255)

                             tCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAGGCGAcg                                                                                                                        >  1:2569255/1‑149 (MQ=255)

                             tCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACa                                                                                                                        <  1:1026448/150‑1 (MQ=255)

                                    cAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGc                                                                                                                 >  2:280662/1‑150 (MQ=255)

                                      aGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGcct                                                                                                               <  1:1659180/150‑1 (MQ=255)

                                       gggTGGCAACCACAATCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  <  2:122525/130‑1 (MQ=255)

                                       gggTGGCAACCACAATCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  >  1:122525/1‑130 (MQ=255)

                                         gcccaatcggctgatgccaaaatttacgaagtattgaaacggacactgagcgcttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatgAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGcctcct                                                                                                            >  1:2397022‑M1/109‑150 (MQ=255)

                                          tGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCtt                                                                                                                                              >  1:1195672/1‑115 (MQ=255)

                                          tGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCctcctc                                                                                                           >  2:569321/1‑150 (MQ=255)

                                          tGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCctcctc                                                                                                           >  1:865725/1‑150 (MQ=255)

                                          tGGCAACCACAAGCTGCTAAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCtt                                                                                                                                              <  2:1195672/115‑1 (MQ=255)

                                            gCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGt                                                                                                                    >  1:2978157/1‑139 (MQ=255)

                                              aaCCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGc                                                                                                                                                 <  2:2617745/108‑1 (MQ=255)

                                                 cacaAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAg                                                                                                    >  2:1296272/1‑150 (MQ=255)

                                                  acaAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAgg                                                                                                   <  1:2150811/150‑1 (MQ=255)

                                                   caAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAggg                                                                                                  >  2:2368971/1‑150 (MQ=255)

                                                   caAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTCTGTGTCCTGATTGGTGCTGATGCCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAggg                                                                                                  <  1:992654/150‑1 (MQ=255)

                                                    aaGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCt                                                                                                                                               >  1:1342731/1‑104 (MQ=255)

                                                      gctgctCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTc                                                                                                                                    >  2:2988726/1‑113 (MQ=255)

                                                      gctgctCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGt                                                                                               <  1:961677/150‑1 (MQ=255)

                                                          ctCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAt                                                                                           >  1:2944266/1‑150 (MQ=255)

                                                           tCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCACTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATc                                                                                          >  1:2488830/1‑150 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  <  2:1667634/108‑1 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  <  1:2935987/108‑1 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  >  2:2935987/1‑108 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGa                                                                                                                          <  2:2419502/116‑1 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGa                                                                                                                          >  1:2419502/1‑116 (MQ=255)

                                                             aaGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCAt                                                                                           >  2:2709088/1‑147 (MQ=255)

                                                              aGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  >  1:2727566/1‑107 (MQ=255)

                                                               ggAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      >  1:1897565/1‑150 (MQ=255)

                                                                gAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtggg                                                                                     >  2:2512201/1‑150 (MQ=255)

                                                                  aTGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgggtg                                                                                   <  2:341525/150‑1 (MQ=255)

                                                                     gAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGcc                                                                                                                <  1:1434625/118‑1 (MQ=255)

                                                                     gAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGAAAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGc                                                                                >  1:2942506/1‑150 (MQ=255)

                                                                      aaaGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCg                                                                               <  2:2944266/150‑1 (MQ=255)

                                                                          cccAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAAt                                                                           <  1:1662084/150‑1 (MQ=255)

                                                                                    ggCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGcctcc                                                                                                             >  2:2086390/1‑106 (MQ=255)

                                                                                     gCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAgg                                                                                                   >  1:1016173/1‑115 (MQ=255)

                                                                                       agaagaAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGt                                                              <  2:510902/150‑1 (MQ=255)

                                                                                         aagaagTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGaa                                                                                                                              >  2:880789/1‑84 (MQ=255)

                                                                                           gaagTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTaaa                                                          >  1:1885463/1‑150 (MQ=255)

                                                                                             cttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatgAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      <  2:2729645‑M1/64‑1 (MQ=255)

                                                                                             cttagtggcgaaacttcctgtttaaccacgtcagctcattccgcccacccacgatgAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      >  1:2729645‑M1/57‑120 (MQ=255)

                                                                                             agTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACa                                                        <  1:120856/150‑1 (MQ=255)

                                                                                                 gAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGaa                                                    >  1:2457641/1‑150 (MQ=255)

                                                                                                    tCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGa                                                                                                                                  >  1:849268/1‑69 (MQ=255)

                                                                                                          gtgtCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCa                                           >  2:2728324/1‑150 (MQ=255)

                                                                                                          cttcctgtttaaccacgtcagctcattccgcccacccacgatgAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      >  2:600532‑M1/44‑107 (MQ=255)

                                                                                                              ccTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTaa                                       <  2:2457641/150‑1 (MQ=255)

                                                                                                               cTGATTTGTGCAAATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAg                                      >  2:907279/1‑150 (MQ=255)

                                                                                                                tGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGc                                                                       <  1:2279394/116‑1 (MQ=255)

                                                                                                                tGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACa                                                        <  2:770710/131‑1 (MQ=255)

                                                                                                                tGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACa                                                        >  1:770710/1‑131 (MQ=255)

                                                                                                                      gtgCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAg                                                                                                                                 <  2:2527822/52‑1 (MQ=255)

                                                                                                                      gtgCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAg                                                                                                                                 >  1:2527822/1‑52 (MQ=255)

                                                                                                                        gCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtg                                                                                       <  1:2820218/92‑1 (MQ=255)

                                                                                                                        gCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtg                                                                                       >  2:2820218/1‑92 (MQ=255)

                                                                                                                         cTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      <  1:1946100/92‑1 (MQ=255)

                                                                                                                         cTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAgtgt                            >  2:1835118/1‑150 (MQ=255)

                                                                                                                         cTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTCTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgtgg                                                                                      >  2:1946100/1‑92 (MQ=255)

                                                                                                                             tGTCGCCCTCATCGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGt                        >  2:732648/1‑150 (MQ=255)

                                                                                                                              gTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGc                                             >  2:115156/1‑128 (MQ=255)

                                                                                                                               tCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTATGCAGGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGttt                      <  1:1569892/150‑1 (MQ=255)

                                                                                                                                 gCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTTTTTTTTTTTACAGCGTCACCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCa                    >  2:155183/1‑150 (MQ=255)

                                                                                                                                   ccTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGCGTAACCGACAGCGTCACCTCCTCGAAACAGGGCGTTCATCGTGGGTGGTCGGAATGAGCTGACGTGGTTAAACAGGAAATTTCGCCACTTAGCGCCAAGTGTCCGTTTCAAt                  >  2:298246/1‑150 (MQ=255)

                                                                                                                                   ccTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGa                                                     >  2:1286878/1‑115 (MQ=255)

                                                                                                                                   ccTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGa                                                     <  1:1286878/115‑1 (MQ=255)

                                                                                                                                           cgcTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCgt                                                                                        >  1:481002/1‑72 (MQ=255)

                                                                                                                                            gcTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAATTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTaa         >  1:2636722/1‑150 (MQ=255)

                                                                                                                                            gcTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCaa                   <  1:3039060/140‑1 (MQ=255)

                                                                                                                                              tATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAAc                                                         >  1:102297/1‑100 (MQ=255)

                                                                                                                                              tATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAAc                                                         <  2:102297/100‑1 (MQ=255)

                                                                                                                                                  tGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGc                                                                       <  2:1392399/82‑1 (MQ=255)

                                                                                                                                                  tGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTg   <  1:2368971/150‑1 (MQ=255)

                                                                                                                                                  tGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTg   <  2:1897565/150‑1 (MQ=255)

GTACAAGAACCCGCATAATGGAGAGGTCATCGAGACCAAGGGTGGCAACCACAAGCTGCTCAAGGAATGGAAAGCCCAGTACGGGGCAGAAGAAGTGGAATCCTGGGTGTCCTGATTTGTGCTGATGTCGCCCTCATTGCGCTATCTGAAACGCCTTGTTCTTTTTCGAGGAAGCGACAGCGTCGCCTCCTCGAAACAGGGCGTTCATCGTGGGTGGGCGGAATGAGCTGACGTGGTTAAACAGGAAGTTTCGCCACTAAGCGCTCAGTGTCCGTTTCAATACTTCGTAAATTTTGG  >  NC_002947/3352039‑3352335

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.