| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4537557 = | NA (NA) | 9 (0.080) | 6/238 | NT | 21.3% | coding (848/1533 nt) | PP_4025 | transposase |
| ? | NC_002947 | = 4626669 | 34 (0.300) | coding (881/1533 nt) | PP_4091 | transposase | |||||
CCGGTGATCCATTGCGATGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCAT > NC_002947/4537424‑4537687 | cctgTGATCCATGGCGATGAAACTCGCGTGCAGGTGGTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCaggag < 1:662623/147‑1 (MQ=0) cggcgCTCAAAGAGCCGGATCGGCATCCTACCAGTCGATCCTGGATGTGGGTGCAGGGCAGTGGCCGGCGTGATCGACAAGTCGTGCTGTTCGATTACACCGCCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATcgcg < 2:1232774/146‑1 (MQ=1) gttcTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCAt < 2:1114708/147‑1 (MQ=1) | CCGGTGATCCATTGCGATGAAACTCGCGTGCAGGTGCTCAAAGAGCCGGATCGTGATCCGACCAGTCAATCCTGGATGTGGGTGCAGGCCAGTGGCCCGCCTGATCGACAAGTCGTGCTGTTCGATTACACCACCAGCCGCGCGCAGGAGGTGCCGCTGCGCCTGCTGGAGGGCTATCGCGGTTACGTGATGACCGATGATTACGCCGGTTACAACGCGTTGGCGCTACAGCCGGGCGTTGAACGACTGGCGTGCATGGCGCAT > NC_002947/4537424‑4537687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |