| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5099995 = | 67 (0.590) | 11 (0.120) | 10/194 | NT | 20.3% | intergenic (+33/+120) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator |
| ? | NC_002947 | 5100077 = | 33 (0.360) | intergenic (+115/+38) | PP_4488/phhR | hypothetical protein/sigma‑54 dependent transcriptional regulator | |||||
Only 100 of 112 total aligned reads displayed.
GCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGA > NC_002947/5099847‑5100138 | tgatgggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTc > 1:2736078‑M1/149‑150 (MQ=255) gatgggggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagccccggggactgcgttgcagtccttTcg > 1:1950051‑M1/148‑150 (MQ=255) gggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggatgagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGaca < 1:2969043‑M1/8‑1 (MQ=255) gggagtttcccagtagtcgggccttgggcaaaagactaggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggaatagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGaca < 1:2489960‑M1/8‑1 (MQ=255) ggagtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGacac < 2:1232796‑M1/9‑1 (MQ=255) gcgtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGAcaca < 2:1249302‑M1/10‑1 (MQ=255) cccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGAcaca > 2:195805/1‑150 (MQ=255) ccAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa < 1:1697344/150‑1 (MQ=255) agtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACaa > 1:930587‑M1/140‑150 (MQ=255) gtttcccagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAg > 2:587659‑M1/139‑150 (MQ=255) cAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCCATCCCGGCACCAg > 2:3015201/1‑150 (MQ=255) tttcccagtagtagggccttgggcaaaagactgggtgtttcgcacacgaaaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg > 1:1722417‑M1/138‑150 (MQ=255) cagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg < 1:568071‑M1/13‑1 (MQ=255) cagtagtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg > 2:568071‑M1/133‑145 (MQ=255) cGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATcgc > 2:2870399/1‑133 (MQ=255) cGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATcgc < 1:2870399/133‑1 (MQ=255) cGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTccc > 1:2579861/1‑150 (MQ=255) gAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCca > 1:110545/1‑150 (MQ=255) agtcgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca > 2:2723411‑M1/129‑150 (MQ=255) cgggccttgggcaaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAg > 2:618266‑M1/126‑150 (MQ=255) tGCCGGCCCGCATGACCTACGCGGCCTCCCAAGGCCAGAATCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATaa < 2:2639302/150‑1 (MQ=255) cccGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAg > 2:1219224/1‑127 (MQ=255) cccGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAg < 1:1219224/127‑1 (MQ=255) ccGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTc > 1:2138604/1‑150 (MQ=255) cGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCa < 2:110545/150‑1 (MQ=255) aaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg < 2:1635615‑M1/13‑1 (MQ=255) aaaagactgggtgtttcgcacacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAgg > 1:1635615‑M1/114‑126 (MQ=255) gCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCAACGATAATGCGCTCAg > 1:1012697/1‑150 (MQ=255) cTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGc > 2:594793/1‑150 (MQ=255) tACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGca > 1:240648/1‑150 (MQ=255) cGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGcaca < 2:2138604/150‑1 (MQ=255) aGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGc < 2:1012697/150‑1 (MQ=255) tCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGc > 2:2257233/1‑134 (MQ=255) tCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGc < 1:2257233/134‑1 (MQ=255) tCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAAATAATGCGCTCAGCCCGAGCACAGCGGAtt > 2:2262346/1‑150 (MQ=255) acacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca < 2:3020412‑M1/22‑1 (MQ=255) acacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca > 1:3020412‑M1/95‑116 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc > 1:2594260/1‑150 (MQ=255) ccAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc > 2:2465244/1‑150 (MQ=255) cacgacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc < 1:2103640‑M1/57‑1 (MQ=255) gacaattgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca > 2:667655‑M1/91‑112 (MQ=255) ggCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:529423/150‑1 (MQ=255) gCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 1:61403/150‑1 (MQ=255) cctcgAATCACAATATCAAATACTGCGTGATGGGGTTCAGCTGCTCGAACAGCAGACGCCTTGGAACCGGGGGCCCTGCGGGCCCATATCGCGACATTTAGCCGTTCTCACGGATAATGCGCTCAGCCAGGGCACAGCGTGTTACCtgtt < 2:1201387/146‑2 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 1:1428374/1‑150 (MQ=255) ccAGAAGCACATTCTCGAATACCGCGTGATGGGAAAAGGCCGCTCCAACTGCTGATACCTTGGAATCGGGGGACCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 1:2506445/150‑1 (MQ=255) aattgccaacaagttgagggattcctcgcttaccaagtcggcggatgagttgtaggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 2:1724074‑M1/88‑150 (MQ=255) attgccaacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTggg > 2:2103640‑M1/87‑150 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGc > 2:1820965/1‑98 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGc < 1:1820965/98‑1 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCCCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:2168608/146‑1 (MQ=255) gAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCCCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg > 1:2168608/1‑146 (MQ=255) aaGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 1:3015201/150‑1 (MQ=255) aGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGcgcg < 1:594793/150‑1 (MQ=255) aGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCg < 1:136148/150‑1 (MQ=255) cacaTTCTCCAATACCGCGTGATGGGGAACGGCTGCTCCGACGCCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGc < 1:334549/150‑1 (MQ=255) aacaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGc < 1:2343291‑M1/70‑1 (MQ=255) acaagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtcctaTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCt > 1:1326819‑M1/80‑138 (MQ=255) caTTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCt < 2:2000787/150‑1 (MQ=255) aagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTc < 1:247051‑M1/2‑1 (MQ=255) aagttgagggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTc > 2:247051‑M1/78‑79 (MQ=255) ttCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtg > 1:1666307/1‑150 (MQ=255) tctcGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtgt < 2:2594260/150‑1 (MQ=255) tatcGCATACGGCGTGACGGAGAACGCCTGCTCGAACGGCTTATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtgt < 2:1428374/148‑1 (MQ=38) gAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCa > 1:2500513/1‑112 (MQ=255) gggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTcgc > 2:2343291‑M1/71‑150 (MQ=255) ggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCt < 1:2901096‑M1/18‑1 (MQ=255) ggattactcgcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCt > 2:2901096‑M1/70‑87 (MQ=255) cgcgTGATGGGGACCGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAg < 1:2262346/150‑1 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa > 2:731183/1‑76 (MQ=255) cgcgTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACaa < 1:731183/76‑1 (MQ=255) ctcgcttaacaagtcggcgtattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCca > 1:906636‑M1/64‑85 (MQ=255) gcttaacaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCcaca > 1:2341831‑M1/61‑84 (MQ=255) ggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTcc < 1:238163/75‑1 (MQ=255) ggAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTcc > 2:238163/1‑75 (MQ=255) acaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTcgc > 2:598452‑M1/56‑59 (MQ=255) acaagtcggcggattagttgttggtcaaagaacctgggactgcgttgcagtccttTcgc < 1:598452‑M1/4‑1 (MQ=255) gctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt < 2:639940/79‑1 (MQ=255) gctgctCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAAt > 1:639940/1‑79 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 1:1525833/1‑107 (MQ=255) tCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 2:1525833/107‑1 (MQ=255) cAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTc > 1:512721/1‑150 (MQ=255) aaCGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCt < 2:1666307/150‑1 (MQ=255) gttgttggtcaaagaacctgggactgcgttacagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgtg < 2:254009‑M1/62‑1 (MQ=255) gCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGa < 2:240648/150‑1 (MQ=255) gCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGa < 2:2403782/150‑1 (MQ=255) ccTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga > 2:2404568/1‑73 (MQ=255) ccTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCaga < 1:2404568/73‑1 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc < 1:2470812/96‑1 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGc > 2:2470812/1‑96 (MQ=255) cTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCaacaac < 1:2465244/150‑1 (MQ=255) aaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg > 2:1640766‑M1/30‑92 (MQ=255) aaagaacctgggactgcgttgcagtccttTCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTgg < 1:1640766‑M1/63‑1 (MQ=255) tGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTAc > 1:1879908/1‑69 (MQ=255) tGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt > 2:2322536/1‑73 (MQ=255) tGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCtgt < 1:2322536/73‑1 (MQ=255) ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtg > 1:2474643/1‑82 (MQ=255) ggCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTtg < 2:2474643/82‑1 (MQ=255) TCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa < 1:1730242‑M1/144‑1 (MQ=255) TCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGa > 2:1730242‑M1/1‑144 (MQ=255) | GCGAAGTGCCCAATGTGTGCGAAGTCGTGCCGGCCCGCATGACCTACGAGGACTCCCAGGGCCAGAAGCACATTCTCGAATACCGCGTGATGGGGAACGGCTGCTCCAACGGCTGATACCTTGGAATCGGGGGCCCTGCGGGCCCCTATCGCGACACAAGGCCGCTCCCACAGATAATGCGCTCAGCCAGAGCACAGCGTATTACCTGTGGGAGCGGCCTTGTGTCGCGAAAGGACTGCAACGCAGTCCCAGGTTCTTTGACCAACAACTAATCCGCCGACTTGTTAAGCGA > NC_002947/5099847‑5100138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |