New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5288442 =58 (0.510)6 (0.070) 4/184 NT 16.3% intergenic (‑75/+109) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B
?NC_002947 5288536 = 18 (0.210)intergenic (‑169/+15) PP_4660/mdaB LysR family transcriptional regulator/drug activity modulator B

Only 100 of 103 total aligned reads displayed.

CTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAG  >  NC_002947/5288293‑5288532
                                                                                                                                                      |                                                                                          
cTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTAGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATgg                                                                                            <  1:471265/150‑1 (MQ=255)
 tCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATggg                                                                                           >  2:128857/1‑150 (MQ=255)
 tCGGCAGCAGCGGAAAGCGAGCCGCAGTCGATGACGACGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATggg                                                                                           >  1:2889715/1‑150 (MQ=255)
 agacccacccgttcctctgcatgaccggcctgccgcccttcctggatgtggatgtgatgaagcgcccgcatgtgccagcggcgttagcagcttatgaggcccatctggacaaggtgttcggcaacgcacagtaattttatgtctgtaccg                                                                                            >  2:1191843‑M1/150‑150 (MQ=255)
  ggccaaccagttcctgggcatgaccggcctgccgaccntcctggctgnggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcgaagtaattttatgtctgtagcgg                                                                                           <  1:1191843‑M1/2‑1 (MQ=255)
  cGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          <  1:128857/150‑1 (MQ=255)
  cGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          <  2:3046086/150‑1 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtgggtgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                          >  2:2742110‑M1/148‑150 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                          <  1:1237049‑M1/3‑1 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                          >  2:252368‑M1/148‑150 (MQ=255)
   gccaaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGc                                                                                          >  2:1392927‑M1/148‑150 (MQ=255)
     caaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCct                                                                                        >  2:1842546‑M1/146‑150 (MQ=255)
      aaccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCctc                                                                                       <  2:2909246‑M1/6‑1 (MQ=255)
        ccagttcctgggcatgactggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCtt                                                                                     <  2:1136153‑M1/8‑1 (MQ=255)
        ccagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCATCtt                                                                                     <  1:2604191‑M1/8‑1 (MQ=255)
         cagttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTc                                                                                    >  2:1090588‑M1/142‑150 (MQ=255)
          gcGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTcgc                                                                                  <  2:2626994/150‑1 (MQ=255)
          gcGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTcgc                                                                                  >  1:883055/1‑150 (MQ=255)
           gttcctgggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgctggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTcgc                                                                                  >  2:1746154‑M1/140‑150 (MQ=255)
            ggAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCgg                                                                                <  2:3056149/150‑1 (MQ=255)
            ggAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCgg                                                                                <  1:1853317/150‑1 (MQ=255)
             gAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGcc                                                                                         <  1:2344933/140‑1 (MQ=255)
             gAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGcc                                                                                         >  2:2344933/1‑140 (MQ=255)
                 gggcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGggcaa                                                                            >  1:2532958‑M1/134‑148 (MQ=255)
                   gcatgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGc                                                                          >  1:1495188‑M1/132‑150 (MQ=255)
                   gAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGcc                                                                         >  1:1826997/1‑150 (MQ=255)
                   gAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGcc                                                                         <  1:447435/150‑1 (MQ=255)
                    catgaccggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGcc                                                                         >  1:2909246‑M1/131‑150 (MQ=255)
                          cggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTcc                                                                   <  1:2115494‑M1/26‑1 (MQ=255)
                          cggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTcc                                                                   <  2:1555821‑M1/26‑1 (MQ=255)
                          cggcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTcc                                                                   <  1:771551‑M1/26‑1 (MQ=255)
                           gTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 <  2:883055/150‑1 (MQ=255)
                           gTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCCGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGCCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 <  2:596381/150‑1 (MQ=255)
                            gcctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 <  2:2123442‑M1/28‑1 (MQ=255)
                              gATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACaa                                                              <  2:379261/150‑1 (MQ=255)
                              ctgccgaccttcctggctgtggatgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCcaca                                                               >  2:381719‑M1/121‑150 (MQ=255)
                                        acgaATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCaaa                                                    <  2:409155/150‑1 (MQ=255)
                                             tACCTGGAGTTCGGCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCACACCATGCGGCCCGGTTTCTCGAAGCCAAGCCCAGCGGCCCCTCACTGGCCCCCCTTGCGGGCTTTCCCGCTCCCACAAGTACTGCAAAGTCCt                                               <  1:700413/150‑1 (MQ=255)
                                                   gAGTTCTTCGTATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAc                                         <  2:1081012/150‑1 (MQ=255)
                                                     tgtgatgaagcgcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAcc                                        <  2:719578‑M1/53‑1 (MQ=255)
                                                        cttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCg                                    <  2:1910873/150‑1 (MQ=255)
                                                         ttcGGATCGGGTTTTCACATCATGGCCATGGGGGGGTCTTGGCAAGTATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGACTGTATGGGCCGCTTGCCGGGGTCGCCCGCCCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGt                                   >  2:2201320/1‑150 (MQ=255)
                                                         ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          >  1:260530/1‑95 (MQ=255)
                                                         ttcGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          <  2:260530/95‑1 (MQ=255)
                                                           cGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTccc                                                                  >  1:1717610/1‑117 (MQ=255)
                                                           cGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTccc                                                                  <  2:1717610/117‑1 (MQ=255)
                                                                gcccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAcc                             <  1:1053952‑M1/64‑1 (MQ=255)
                                                                cGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCt                            <  2:275903/150‑1 (MQ=255)
                                                                  ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                              <  1:1067515/130‑1 (MQ=255)
                                                                  ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                              >  2:1067515/1‑130 (MQ=255)
                                                                  ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAc                              <  1:2020931/146‑1 (MQ=255)
                                                                  ggTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATAc                              >  2:2020931/1‑146 (MQ=255)
                                                                  ccggatgtgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtg                           >  1:719578‑M1/85‑150 (MQ=255)
                                                                    ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAATCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCGGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTgg                        <  2:1855578/150‑1 (MQ=255)
                                                                    ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          >  1:1239049/1‑84 (MQ=255)
                                                                    ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGc                                                                                          <  2:1239049/84‑1 (MQ=255)
                                                                    ttttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTgg                        <  1:2201320/150‑1 (MQ=255)
                                                                     tttCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTggg                       >  2:2870115/1‑150 (MQ=255)
                                                                       tCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCt                                               <  2:2387355/124‑1 (MQ=255)
                                                                       tCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCt                                               >  1:2387355/1‑124 (MQ=255)
                                                                         tgccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 >  2:303733‑M1/78‑105 (MQ=255)
                                                                         acaTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                   <  2:1826997/150‑1 (MQ=255)
                                                                          caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  <  2:2889715/150‑1 (MQ=255)
                                                                          caTCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  <  2:2931484/150‑1 (MQ=255)
                                                                           ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  >  2:1940687‑M1/76‑150 (MQ=255)
                                                                           ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  >  2:1053952‑M1/76‑150 (MQ=255)
                                                                           ccggcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  >  2:1237049‑M1/76‑150 (MQ=255)
                                                                              gcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCtt                                                                            >  1:2491632‑M1/73‑89 (MQ=255)
                                                                              gcggcgttggcagcttatgaggcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTCGCGGGCtt                                                                            <  2:2491632‑M1/17‑1 (MQ=255)
                                                                              aGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                   >  2:2125347/1‑145 (MQ=255)
                                                                              aGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                   <  1:2125347/145‑1 (MQ=255)
                                                                                ggCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCGAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGc            <  2:542408/150‑1 (MQ=255)
                                                                                     gtgGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCGACaa                                                              >  1:631261/1‑95 (MQ=255)
                                                                                     gtgGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACaa                                                              <  2:631261/95‑1 (MQ=255)
                                                                                               tgtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCTTAATACCTGTGGGAGCg                   >  2:1118791/1‑128 (MQ=255)
                                                                                               tgtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCg                   <  1:1118791/128‑1 (MQ=255)
                                                                                                gtgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCt                                       <  1:2009074/107‑1 (MQ=255)
                                                                                                 tgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                              <  1:382068/99‑1 (MQ=255)
                                                                                                 tgCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCtt                                              >  2:382068/1‑99 (MQ=255)
                                                                                                   gcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTc                                                                                    <  2:2582067‑M1/9‑1 (MQ=255)
                                                                                                   gcccatctggacaaggtgtttggcaaggcacagtaattttatgtctgtaccGGCCTCTTc                                                                                    >  1:2582067‑M1/52‑60 (MQ=255)
                                                                                                        gATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAagag  <  2:2283989/137‑1 (MQ=255)
                                                                                                        gATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAagag  >  1:2283989/1‑137 (MQ=255)
                                                                                                               tAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCg                                    >  2:2476127/1‑96 (MQ=255)
                                                                                                               tAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCg                                    <  1:2476127/96‑1 (MQ=255)
                                                                                                                aaCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAc                                         >  1:2646702/1‑90 (MQ=255)
                                                                                                                aaCCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAAc                                         <  2:2646702/90‑1 (MQ=255)
                                                                                                                   cGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  <  1:1095044/110‑1 (MQ=255)
                                                                                                                   cGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCgg                  >  2:1095044/1‑110 (MQ=255)
                                                                                                                        gTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTc                                                 <  2:2025327/74‑1 (MQ=255)
                                                                                                                        gTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTc                                                 >  1:2025327/1‑74 (MQ=255)
                                                                                                                                   gTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtg                           >  2:1419465/1‑85 (MQ=255)
                                                                                                                                   gTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtg                           >  2:1418721/1‑85 (MQ=255)
                                                                                                                                   gTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtg                           <  1:1418721/85‑1 (MQ=255)
                                                                                                                                   gTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtg                           <  1:1419465/85‑1 (MQ=255)
                                                                                                                                           atgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 <  1:1945196‑M1/28‑1 (MQ=255)
                                                                                                                                           atgtctgtaccGGCCTCTTCGCGGGCTTGCCCGCTCCca                                                                 >  2:1945196‑M1/12‑39 (MQ=255)
                                                                                                                                             gcCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTcc                                                <  1:905371/54‑1 (MQ=255)
                                                                                                                                               cTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt                          <  1:1747840/74‑1 (MQ=255)
                                                                                                                                               cTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCtgt                          >  2:1747840/1‑74 (MQ=255)
                                                                                                                                                      |                                                                                          
CTCGGCAGCAGCGGAAATCGAGCCGCAGTCGATGACGGCGACGAATACCTGGAGTTCTTCGGATCGGGTTTTCACATCAGGGCCTGTGGTTGGTCTGTGCAAGGATTAGATAACCGCTTGTCGAGGCCAAGTCCAGCGGCGCCTGTATGGGCCTCTTCGCGGGCTTGCCCGCTCCCACAAGTACTGCAAAGTCCTTGAAACCTGCGTAATACCTGTGGGAGCGGGCAAGCCCGCGAAGAG  >  NC_002947/5288293‑5288532

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.