New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 551331562 (0.540)16 (0.180) 15/192 NT 23.7% intergenic (+45/‑109) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein
?NC_002947 = 5513371 54 (0.600)intergenic (+101/‑53) urtD/urtE ABC transporter ATP‑binding protein/ABC transporter ATP‑binding protein

Only 100 of 177 total aligned reads displayed.

CCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGC  >  NC_002947/5513167‑5513462
                                                                                                                                                     |                                                                                                                                                   
  gACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAccc                                                                                                                                                  >  1:1027881/1‑150 (MQ=255)
     cATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGt                                                                                                                                               >  1:1716839/1‑150 (MQ=255)
      aTGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGtt                                                                                                                                              <  1:2374693/150‑1 (MQ=255)
            ccGTGCTGCACCAGGGGCGTGCGCTGGCGGAAGGCTCGTTTGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTTACCGGATTTTAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        <  1:1159359/150‑1 (MQ=255)
                 gccgatcttggcttcgaaggacaggccgcgcaggatgtggctgccgccgcagtactggtgcagggtgtcgatcttgagcatgtgagagttcctgaaagggatgctgtGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTgg                                                                                                                                    <  2:1482526‑M1/43‑1 (MQ=255)
                     aCCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCGGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTg                                                                                                                                     <  2:1674034/144‑1 (MQ=255)
                     aCCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCGGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTg                                                                                                                                     >  1:1674034/1‑144 (MQ=255)
                     aCCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGGGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCTCGGGTAGCCCCGTTCCTACAGTGGGCGTa                                                                                                                               >  1:882148/1‑150 (MQ=255)
                      ccAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAccc                                                                                                                                                  >  2:395151/1‑130 (MQ=255)
                      ccAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAccc                                                                                                                                                  <  1:395151/130‑1 (MQ=255)
                      ccAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTaa                                                                                                                              <  2:2921176/150‑1 (MQ=255)
                      ccAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTaa                                                                                                                              <  1:489823/150‑1 (MQ=255)
                       cttggcttcgaaggacaggccgcgcaggatgtggctgccgccgtagtactggtgcagggtgtcgatcttgagcatgtgagagttcctgaaagggatgctgcGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTaa                                                                                                                              <  2:624808‑M1/49‑1 (MQ=255)
                         ggggAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGCAGGAGAGAGATGGACGTGGTGGCGATGTTTGTCTGGGTCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGc                                                                                                                           >  1:838176/1‑150 (MQ=255)
                          gggAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCCCGGGTAACCCTGTTCCTACAATGGGCGTAATGcc                                                                                                                          >  2:2271497/1‑150 (MQ=255)
                                 tgCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGc                                                                                                                   <  1:2774473/150‑1 (MQ=255)
                                   cTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCgg                                                                                                                 <  1:2259045/150‑1 (MQ=255)
                                    tGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGt                                                                                                                >  1:1952524/1‑150 (MQ=255)
                                    tGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCACTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGt                                                                                                                >  1:1243917/1‑150 (MQ=255)
                                      gCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTc                                                                                                              <  2:1716839/150‑1 (MQ=255)
                                            ggCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCcgtcg                                                                                                        <  1:500897/150‑1 (MQ=255)
                                             gCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgt                                                                                                       <  1:1565961‑M1/150‑47 (MQ=255)
                                              cTCGCTGGAGCAGGTGCAGGCAGATGACCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGCTTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACCGTGGGCGTAATGCCATCGGGCGGTTCCcgacgga                                                                                                      >  2:866212/1‑148 (MQ=255)
                                                      aGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAccccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggg                                                                                              <  2:1067782‑M1/150‑56 (MQ=255)
                                                       ggctgccgccgtagtactggtgcagggtgtcgatcttgagcatgtgagagttcctgaaagggatgctgcGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCggg                                                                                              >  1:624808‑M1/70‑150 (MQ=255)
                                                       gCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGt                                                                                             <  2:1027881/150‑1 (MQ=255)
                                                       gCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGt                                                                                             <  1:559404/150‑1 (MQ=255)
                                                          ggTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTtta                                                                                          >  1:2163723‑M2/1‑147 (MQ=255)
                                                          ggTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCCCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggtta                                                                                          <  2:1631982‑M1/150‑60 (MQ=255)
                                                           gTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttac                                                                                         >  1:3009025‑M1/1‑90 (MQ=255)
                                                           gTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttac                                                                                         >  1:3020126‑M2/1‑146 (MQ=255)
                                                           gTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttac                                                                                         <  1:954009‑M2/150‑5 (MQ=255)
                                                             cgccgtagtactggtgcagggtgtcgatcttgagcatgtgagagttcctgaaagggatgctgtGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTAcc                                                                                        >  1:720989‑M1/64‑150 (MQ=255)
                                                               aggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTc                                                                                                              <  2:1806147/125‑1 (MQ=255)
                                                               aggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTc                                                                                                              >  1:1806147/1‑125 (MQ=255)
                                                                ggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacgggg                                                                                             >  2:1163348‑M1/1‑85 (MQ=255)
                                                                ggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacgggg                                                                                             <  1:1163348‑M1/141‑57 (MQ=255)
                                                                ggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCAGTTCCTACa                                                                                                                                        <  1:391960/98‑1 (MQ=255)
                                                                ggcagATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCAGTTCCTACa                                                                                                                                        >  2:391960/1‑98 (MQ=255)
                                                                   agATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaag                                                                                 <  2:2087349‑M2/150‑13 (MQ=255)
                                                                    gATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaaga                                                                                <  1:2438938‑M1/150‑70 (MQ=255)
                                                                     aTGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTACCCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagag                                                                               >  2:2520578‑M2/1‑136 (MQ=255)
                                                                      tGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        <  1:2140409/92‑1 (MQ=255)
                                                                      tGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        >  2:2140409/1‑92 (MQ=255)
                                                                       gAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTACCCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggc                                                                             >  2:2417295‑M2/1‑134 (MQ=255)
                                                                          cGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccgg                                                                          >  1:2087349‑M2/1‑131 (MQ=255)
                                                                           gggTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggc                                                                         >  2:954009‑M2/1‑130 (MQ=255)
                                                                             ggtggtCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggca                                                                        <  2:2748621‑M2/150‑22 (MQ=255)
                                                                               tggtCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCTCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcaca                                                                      >  2:882148‑M2/1‑127 (MQ=255)
                                                                                  tCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        >  2:744421/1‑81 (MQ=255)
                                                                                     aGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGt                                                                                                                <  1:2704095/102‑1 (MQ=255)
                                                                                       gtgtATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacag                                                                     >  2:2468262‑M2/1‑119 (MQ=255)
                                                                                       gtgtATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGc                                                              >  2:2587642/1‑150 (MQ=255)
                                                                                       gtgtATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGCGGGCGTAATGCCATGGGGCGGTTCCcg                                                                                                           <  1:1405358/105‑1 (MQ=255)
                                                                                        tcttgagcatgtgagagttcctgaaagggatgctgtGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTAcc                                                                                        >  1:1675997‑M1/37‑123 (MQ=255)
                                                                                              tGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaa                                                                                  >  2:1535030‑M2/1‑112 (MQ=255)
                                                                                                ggCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTc                                                     >  2:2314814/1‑150 (MQ=255)
                                                                                                   cGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        <  1:1106344/64‑1 (MQ=255)
                                                                                                   cGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACa                                                                                                                                        >  2:1106344/1‑64 (MQ=255)
                                                                                                    gCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaa                                                                                  <  1:1806189‑M1/117‑68 (MQ=255)
                                                                                                     cTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGaa                                                <  1:2748621/150‑1 (MQ=255)
                                                                                                          cGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACCGTGGGCGTAATGCCAt                                                                                                                        >  2:1953256/1‑73 (MQ=255)
                                                                                                            gATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCCCGTCCCGTCGTAGGAGCGGGTCTACCTGGCCGTAGGCCTTGACAGGCACAGCATCCCTTTCAGGAACTCTcac                                         >  1:1453321/1‑150 (MQ=255)
                                                                                                               ttGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCgg                                                                                               >  2:2171170/1‑93 (MQ=255)
                                                                                                                       ttGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGAt                              <  1:2314814/150‑1 (MQ=255)
                                                                                                                             ccTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgac                        >  2:1772862‑M1/1‑25 (MQ=255)
                                                                                                                             CCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGacac                        <  2:1790087‑M1/150‑1 (MQ=255)
                                                                                                                              cTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacac                              >  2:2468262‑M1/1‑24 (MQ=255)
                                                                                                                              cTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacac                              <  1:2468262‑M1/143‑120 (MQ=255)
                                                                                                                              cTGTGCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggg                                                                                              <  2:1683240‑M1/79‑56 (MQ=255)
                                                                                                                              CTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCGCATGATCAAGACCGACAcc                       <  2:2023621‑M1/150‑1 (MQ=255)
                                                                                                                                 tgCCGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacc                    <  2:2748621‑M1/150‑130 (MQ=255)
                                                                                                                                 cgcctgcctcTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccacgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacc                    >  1:107039‑M1/2‑21 (MQ=255)
                                                                                                                                   ccGGCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccg                  >  1:2087349‑M1/1‑19 (MQ=255)
                                                                                                                                     GGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCa                                                    <  1:1064026‑M1/114‑1 (MQ=255)
                                                                                                                                      gCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgc                                                                                     <  1:193041‑M1/80‑65 (MQ=255)
                                                                                                                                      gCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttac                                                                                         <  1:1641572‑M1/76‑61 (MQ=255)
                                                                                                                                      gCCTCTTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttac                                                                                         >  2:1641572‑M1/1‑16 (MQ=255)
                                                                                                                                      GCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAg                                                   >  1:472357‑M1/1‑114 (MQ=255)
                                                                                                                                      GCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAg                                                   <  2:472357‑M1/114‑1 (MQ=255)
                                                                                                                                         tctTCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatc            <  1:2734406‑M1/150‑138 (MQ=255)
                                                                                                                                           ttCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctg          >  2:1628626‑M1/1‑11 (MQ=255)
                                                                                                                                           ttCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggccca                                     <  1:1535030‑M1/123‑113 (MQ=255)
                                                                                                                                           ttCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggtta                                                                                          <  2:1376358‑M1/70‑60 (MQ=255)
                                                                                                                                           ttCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggtta                                                                                          >  1:1376358‑M1/1‑11 (MQ=255)
                                                                                                                                           ttCGCGGGTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacgggg                                                                                             >  1:378257‑M1/1‑11 (MQ=255)
                                                                                                                                           ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctg          <  2:3009025‑M2/150‑84 (MQ=255)
                                                                                                                                           ttCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagc                                           >  2:1806189‑M2/1‑67 (MQ=255)
                                                                                                                                             CGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGtactac        >  1:1790087‑M1/1‑150 (MQ=255)
                                                                                                                                              gcgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcgtcccagatacacctc                           <  2:354880‑M2/130‑67 (MQ=255)
                                                                                                                                              gcgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcgtcccagatacacctc                           >  1:354880‑M2/1‑64 (MQ=255)
                                                                                                                                              gcgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcct       >  2:2438938‑M2/1‑64 (MQ=255)
                                                                                                                                              gcgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggc                                                                             >  2:193041‑M2/1‑64 (MQ=255)
                                                                                                                                               cgGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctg      <  2:1510039‑M2/150‑88 (MQ=255)
                                                                                                                                                gggTAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagtggcccagatacacctcgaccacccgctcatctgcctgc     >  2:1243917‑M1/1‑6 (MQ=255)
                                                                                                                                                 ggTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGCAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgca    <  2:1733356‑M2/150‑90 (MQ=255)
                                                                                                                                                  gTAAccccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgcac   <  2:458341‑M1/150‑147 (MQ=255)
                                                                                                                                                  gTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaagaggccggcacaggcgccaaaaattcaaatccggtcagcggcccagatacacctcgaccacccgctcatctgcctgcac   >  1:3009025‑M2/1‑60 (MQ=255)
                                                                                                                                                   tAAacccgctcctacgacgggaaccgccccatggcattacgcccactgtaggaacggggttacccgcgaagaggccggcacatgacccaataattcaaatcccgtcagcggcccagatacacctcgaccacccgctcatctgcctgcacc  >  2:1347842‑M1/1‑3 (MQ=255)
                                                                                                                                                   tAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTttacccgcgaa                                                                                  <  2:1376358‑M2/70‑12 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCGACCATGTGACCGTGCTGCACCAGGGGAGTGTGCTGGCGGAAGGCTCGCTGGAGCAGGTGCAGGCAGATGAGCGGGTGGTCGAGGTGTATCTGGGCCGCTGACCGGATTTGAATTTTTGGCGCCTGTGCCGGCCTCTTCGCGGGTAACCCCGTTCCTACAGTGGGCGTAATGCCATGGGGCGGTTCCCGTCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCACAGCATCCCTTTCAGGAACTCTCACATGCTCAAGATCGACACCCTGCACCAGTACTACGGCGGC  >  NC_002947/5513167‑5513462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.