New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 6149201124 (1.080)4 (0.040) 4/232 NT 3.3% intergenic (‑1329/‑1845) PP_5393/PP_5395 metal‑binding chaperone/hypothetical protein
?NC_002947 = 6149212 114 (1.050)intergenic (‑1340/‑1834) PP_5393/PP_5395 metal‑binding chaperone/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 161 total aligned reads displayed.

CCAGGCTGGCGGCAAGGCGCAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGACCCAGCCAGGCTCCGGTCCG  >  NC_002947/6149052‑6149347
                                                                                                                                                     |                                                                                                                                                   
ccAGGCTGGCGGCAAGGCGCAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT                                                                                                                                                     <  2:2208417‑M1/150‑1 (MQ=255)
       ggcggcAAGGCGCAAGAGTTCGGGTGGAATGCACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             <  2:336783/150‑1 (MQ=255)
         cggcAAGGCGCAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAaga                                                                                                                                           <  1:1027443/150‑1 (MQ=255)
               ggCGCAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCAGGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgc                                                                                                                                     <  1:840170‑M2/150‑5 (MQ=255)
                 cgcAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGCCGACCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgcca                                                                                                                                   >  2:462316‑M2/1‑144 (MQ=255)
                  gcAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgc                                                                                                                                     >  1:332521‑M2/1‑143 (MQ=255)
                  gcAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCAc                                                                                                                                  >  1:457506/1‑150 (MQ=255)
                      gACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCActgct                                                                                                                              >  2:2925588/1‑150 (MQ=255)
                         ttCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCAGTGGCGTgctcttccgagacgccagtgctatc                                                                                                                            <  1:2785858‑M1/150‑26 (MQ=255)
                          tCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAAGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCa                                                                                                                          <  1:2834690/150‑1 (MQ=255)
                            gggTGGCATGAACTGCCCGGTACCAACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGATGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGc                                                                                                                        >  2:979922/1‑150 (MQ=255)
                               tGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgcca                                                                                                                                   <  1:108098‑M2/136‑7 (MQ=255)
                               tGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgcca                                                                                                                                   >  2:108098‑M2/1‑130 (MQ=255)
                                  cATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTccc                                                                                                                  <  2:2710850/150‑1 (MQ=255)
                                   attaaCTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCActgct                                                                                                                              <  1:1680842/134‑1 (MQ=255)
                                   aTGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGGCCCGGTCTTGTCGACGATTAGCGTATAGATCTTGCAGAGGTTCTCGATAGCCCTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTccct                                                                                                                 >  2:960146/1‑149 (MQ=255)
                                    tGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCACTCGAGTAGCTGTCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCgg                                                                                                                <  2:861280/150‑1 (MQ=255)
                                       aCTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGTGCTCTTCCGAGcgccagtgctatcgagaacctctgcaa                                                                                                               >  1:2058549‑M2/1‑123 (MQ=255)
                                         tGCCCGGTACCGACCACGCTATGAAATACTTGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCacgcca                                                                                                                                   <  1:2387822‑M2/126‑7 (MQ=255)
                                            ccGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGAcc                                                                                                        >  1:2880594/1‑150 (MQ=255)
                                            ccGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGAcc                                                                                                        >  1:574668/1‑150 (MQ=255)
                                                 aCCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGAt                                                                                                   <  1:116966/150‑1 (MQ=255)
                                                    gACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGa                                                                                                >  2:525514/1‑150 (MQ=255)
                                                     aCCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCACGGTAGCGAcc                                                                                                        >  2:445440/1‑141 (MQ=255)
                                                       cACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACAt                                                                                             >  1:914002/1‑150 (MQ=255)
                                                        aCGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGGGGGCATGATCGACAtt                                                                                            >  2:332177/1‑149 (MQ=255)
                                                         cGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATgg                                                                                           <  1:1459725/150‑1 (MQ=255)
                                                           cTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGa                                                                                         <  2:2145891/150‑1 (MQ=255)
                                                           cTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGa                                                                                         <  1:1363315/150‑1 (MQ=255)
                                                             aTGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGt                                                                                       <  2:2549896/150‑1 (MQ=255)
                                                             aTGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGt                                                                                       >  2:2793301/1‑150 (MQ=255)
                                                               gAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGGTCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTgg                                                                                     >  2:270337/1‑150 (MQ=255)
                                                               gAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             >  2:1971444/1‑94 (MQ=255)
                                                               gAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             <  1:1971444/94‑1 (MQ=255)
                                                               gAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCAGTCCCGCAGAGGTTCTCGATCGACCTGGCGT‑ATCGGAAACTCCTGGCATGGTGGGCAGCGTTCCCGGTAGCGACCATGATCGACATGGGAGTgg                                                                                     <  1:1595800/150‑1 (MQ=255)
                                                                aaaTACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCActgc                                                                                                                               <  1:1888340/107‑1 (MQ=255)
                                                                  aTACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTa                                                                                  <  2:914002/150‑1 (MQ=255)
                                                                   tACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAACCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAg                                                                                 <  1:2925588/150‑1 (MQ=255)
                                                                        gccggccTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             <  1:435489/85‑1 (MQ=255)
                                                                        gccggccTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGa                                                                            <  1:1229634/150‑1 (MQ=255)
                                                                         ccggccTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTcc                                                                                                                   <  2:35787/110‑1 (MQ=255)
                                                                              cTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCAt                                                                                                      <  2:2479976/118‑1 (MQ=255)
                                                                              cTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCAt                                                                                                      >  1:2479976/1‑118 (MQ=255)
                                                                                   gTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATggg                                                                                          <  2:1401695/125‑1 (MQ=255)
                                                                                     gAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGggca                                                               <  2:1372756/150‑1 (MQ=255)
                                                                                      aGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGggcag                                                              <  1:1384116/150‑1 (MQ=255)
                                                                                        ggTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGggcaggc                                                            >  2:2097691/1‑150 (MQ=255)
                                                                                        ggTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGggcaggc                                                            >  2:2287020/1‑150 (MQ=255)
                                                                                          tCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCaa                                                          >  1:2964032/1‑150 (MQ=255)
                                                                                           cccGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCac                                                                                                                                       >  2:596113‑M2/1‑70 (MQ=255)
                                                                                           cccGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAg                                                                    >  2:2453449/1‑139 (MQ=255)
                                                                                            ccGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATgg                                                                                           <  2:2159481/115‑1 (MQ=255)
                                                                                              ggTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGAt                                                      >  1:514084/1‑150 (MQ=255)
                                                                                                     tCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGTgctcttccgagacgccagt                                                                                                                                  >  1:2707278‑M1/1‑49 (MQ=255)
                                                                                                     tCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             <  2:532235/56‑1 (MQ=255)
                                                                                                     tCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGaa                                                                                                                                             >  1:532235/1‑56 (MQ=255)
                                                                                                     tCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGAc                                                                                                         <  1:248338/92‑1 (MQ=255)
                                                                                                     tCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAAcc                                               >  2:1827709/1‑150 (MQ=255)
                                                                                                       gacgaTTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGc                                             >  1:1593466/1‑150 (MQ=255)
                                                                                                          gaTTAGCGTGTCGATCTTGCAGATGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCTTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTAc                                          <  1:979922/150‑1 (MQ=255)
                                                                                                          gaTTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGggc                                                                >  1:2121657/1‑128 (MQ=255)
                                                                                                           aTTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCa                                                                                                       >  2:1900156/1‑88 (MQ=255)
                                                                                                           aTTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCa                                                                                                       <  1:1900156/88‑1 (MQ=255)
                                                                                                              aGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGATAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCa                                      >  1:2366318/1‑150 (MQ=255)
                                                                                                               gCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATg                                                        >  1:2077814/1‑131 (MQ=255)
                                                                                                               gCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATg                                                        <  2:2077814/131‑1 (MQ=255)
                                                                                                               gCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCAt                                     >  2:1554491/1‑150 (MQ=255)
                                                                                                               gCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CCCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCAt                                     >  1:2923682/1‑150 (MQ=255)
                                                                                                                  tgtCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATtaa                                  >  1:462021/1‑150 (MQ=255)
                                                                                                                    tCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCAAGCCGCGGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATtaata                                >  1:1616072/1‑150 (MQ=255)
                                                                                                                      gATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCCCGCCACTGCTGGCCGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGGTACCGCAGTGATAAg                              >  1:407698/1‑150 (MQ=255)
                                                                                                                      gATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAg                              >  1:2134735/1‑150 (MQ=255)
                                                                                                                            gCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGaa                        <  2:1593466/150‑1 (MQ=255)
                                                                                                                              agcggTTGTCGATAGCACTGGCGG‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGTCCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGa                      >  2:2204308/4‑150 (MQ=255)
                                                                                                                              agagGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGc                                                                                                                                         >  2:545075/1‑35 (MQ=255)
                                                                                                                              agagGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGc                                                                                                                                         <  1:545075/35‑1 (MQ=255)
                                                                                                                              agagGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAgg                             >  2:1317065/1‑143 (MQ=255)
                                                                                                                               gagGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGc                                             <  2:3059524/126‑1 (MQ=255)
                                                                                                                                  gTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAAcc                                               >  2:1769860/1‑121 (MQ=255)
                                                                                                                                   ttCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGAt                                                      >  1:644347/1‑113 (MQ=255)
                                                                                                                                   ttCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGAt                                                      <  2:644347/113‑1 (MQ=255)
                                                                                                                                   ttCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCAtt                                    >  2:2908037/1‑131 (MQ=255)
                                                                                                                                   ttCTCGATAGCACGGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCATGCAATGATCAAAACCGCTACCGCATTAATACGGCCGAAGACccag                 <  1:960146/150‑1 (MQ=255)
                                                                                                                                     ctcGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGATAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGACccagcc               <  2:2366318/150‑1 (MQ=255)
                                                                                                                                      tcGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGACccagcca              <  2:832189/150‑1 (MQ=255)
                                                                                                                                              aCTGGCGT‑CTCGGAAGAGCacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcga                                                                                        <  2:2707278‑M2/68‑50 (MQ=255)
                                                                                                                                              aCTGGCGT‑CTCGGAAGAGCacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcga                                                                                        >  1:2707278‑M2/1‑19 (MQ=255)
                                                                                                                                                tGGCGTgctcttccgagacgccagtgctatcgagaacctctgcaaggtcggcacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgccacccgaagtcttgcg     >  2:462316‑M1/1‑6 (MQ=255)
                                                                                                                                                tGGCGTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgcca                   >  2:108098‑M1/1‑6 (MQ=255)
                                                                                                                                                tGGCGTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggca                             >  2:2387822‑M1/1‑6 (MQ=255)
                                                                                                                                                tGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATtaataat                              >  1:2307267/1‑123 (MQ=255)
                                                                                                                                                tGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGACCCAGCCAGGCTCCGGTc    >  1:2224187/1‑150 (MQ=255)
                                                                                                                                                 gtcgtgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgccacccgaagtcttgcgc    <  1:42425‑M1/148‑146 (MQ=255)
                                                                                                                                                 ggCGTgctcttccgagacgccagtgccatcgagctcctcttcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgccacccgaagtcttgcgc    <  2:2548443‑M1/150‑146 (MQ=255)
                                                                                                                                                  gCGTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtctacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgccacccgaagtcttgc      <  2:332521‑M1/147‑144 (MQ=255)
                                                                                                                                                  gCGTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcgtggtcggtaccgggcagttcatgccacccgaagtcttgc      >  1:332521‑M1/1‑4 (MQ=255)
                                                                                                                                                  gCGTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccgggaccctcaccgaaggccggccagtatttcatagcctggtcggtaccgggcagttcatgccacccgaagtcttgcgcc   <  1:840170‑M1/150‑147 (MQ=255)
                                                                                                                                                    gTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccggg                                                                               >  2:596113‑M1/1‑2 (MQ=255)
                                                                                                                                                    gTgctcttccgagacgccagtgctatcgagaacctctgcaagatcgacacgctaatcgtcgacaagaccggg                                                                               <  1:596113‑M1/72‑71 (MQ=255)
                                                                                                                                                     t‑ctcGGAAGAGCACGCCACTTCTGGCAGCCTTCCCGGTAGCGAc                                                                                                         <  1:1065743/44‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
CCAGGCTGGCGGCAAGGCGCAAGACTTCGGGTGGCATGAACTGCCCGGTACCGACCACGCTATGAAATACTGGCCGGCCTTCGGTGAGGGTCCCGGTCTTGTCGACGATTAGCGTGTCGATCTTGCAGAGGTTCTCGATAGCACTGGCGT‑CTCGGAAGAGCACGCCACTGCTGGCAGCCTTCCCGGTAGCGACCATGATCGACATGGGAGTGGCTAGGCCGAGCGCGCAGGGGCAGGCAATGATCAAAACCGCTACCGCATTAATAAGGCCGAAGACCCAGCCAGGCTCCGGTCCG  >  NC_002947/6149052‑6149347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.