New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 413997 =66 (0.580)11 (0.120) 10/188 NT 24.0% intergenic (+14/‑189) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II
?NC_002947 414083 = 19 (0.220)intergenic (+100/‑103) glnE/waaF glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II

GGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGAT  >  NC_002947/414004‑414232
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GGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt                                                                                                                    <  2:2594601‑M1/115‑1 (MQ=255)
GGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCt                                                                                                                    >  1:2594601‑M1/1‑115 (MQ=255)
  GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCAAGGCTGTACCGCAGCCt                                                                               <  1:546220‑M1/150‑1 (MQ=255)
      GCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGa                                                                                                    >  2:2033953‑M1/1‑125 (MQ=255)
      GCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGa                                                                                                    <  1:2033953‑M1/125‑1 (MQ=255)
      GCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAg                                                                           <  2:1937055‑M1/150‑1 (MQ=255)
      GCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAg                                                                           <  2:2217805‑M1/150‑1 (MQ=255)
       CCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATa                                                                                                                        >  2:1990418‑M1/1‑104 (MQ=255)
       CCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATa                                                                                                                        <  1:1990418‑M1/104‑1 (MQ=255)
       CCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACCGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCCCCGCCTCTAGc                                                                          <  2:341804‑M1/150‑1 (MQ=255)
        CCGCTCCCCCAGGTACTGCACAGGCCCTGAGCAGTGTGCCATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGAGGGGCCGTGCTGTACCTCAGCCTGTAGcc                                                                         <  2:1292809‑M1/150‑1 (MQ=255)
        CCGCTCCCACAGTTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGcc                                                                         <  1:2273659‑M1/150‑1 (MQ=255)
         CGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGa                                                                                                                  <  1:838228‑M1/108‑1 (MQ=255)
         CGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGa                                                                                                                  >  2:838228‑M1/1‑108 (MQ=255)
          gctcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGa                                                                                                    >  2:1401522‑M2/70‑121 (MQ=255)
          gctcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGa                                                                                                    <  1:1401522‑M2/52‑1 (MQ=255)
          GCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTc                                                                       <  2:541868‑M1/150‑1 (MQ=255)
            tcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGATGTACCGCAGCCTGTAGcccccc                                                                     >  1:925004‑M2/68‑150 (MQ=255)
              ccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg                                                                   >  1:933520‑M2/66‑150 (MQ=255)
              CCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg                                                                   <  1:2292845‑M1/150‑1 (MQ=255)
              CCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCg                                                                   <  1:741763‑M1/150‑1 (MQ=255)
              CCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGACTGTAGGCTCGCCg                                                                   <  1:1493429‑M1/150‑1 (MQ=255)
               cacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGAAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                  >  2:2072658‑M2/65‑150 (MQ=255)
               CACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCATGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                  <  2:655131‑M1/150‑1 (MQ=255)
                ACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCATGCTGTACCGCAGCCTGTAGCCTCCCCGAg                                                                 <  2:2802507‑M1/150‑1 (MQ=255)
                ACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAg                                                                 <  1:458309‑M1/150‑1 (MQ=255)
                ACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTCCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTAc                                                                                       >  2:560047‑M1/1‑128 (MQ=255)
                ACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTCCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTAc                                                                                       <  1:560047‑M1/128‑1 (MQ=255)
                  agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaatagg                                                                                                                                                      >  1:927042‑M2/62‑63 (MQ=255)
                  agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaatagg                                                                                                                                                      <  2:927042‑M2/2‑1 (MQ=255)
                  agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGt                                                                                                                                            >  1:1387308‑M2/62‑73 (MQ=255)
                  agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGt                                                                                                                                            <  2:1387308‑M2/12‑1 (MQ=255)
                  agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCTCGAGCg                                                               >  1:912077‑M2/62‑150 (MQ=255)
                  AGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACCTGTGCTGGATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCg                                                               <  1:809976‑M1/150‑1 (MQ=255)
                   GGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGt                                                              <  1:2466114‑M1/150‑1 (MQ=255)
                    ggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGtt                                                             >  2:1597220‑M2/60‑150 (MQ=255)
                     tACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCGCATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCGGTAGCCTCCCCGAGCGttt                                                            >  2:2017062/1‑150 (MQ=255)
                       cttcacaGGCCCTGAGCAGTGTGCAATCTCTGTGGGAGCGGGCTTGCACTCCAATAGGCCATGTGAGTGGTACACTTTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCt                                                          <  2:1493429/147‑1 (MQ=255)
                       cTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCt                                                          >  2:775290/1‑150 (MQ=255)
                        tGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTg                                                         <  2:741763/150‑1 (MQ=255)
                          cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCa                                                                                   <  2:187074/122‑1 (MQ=255)
                          cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCa                                                                                   >  1:187074/1‑122 (MQ=255)
                          cacaGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                       >  2:104870/1‑150 (MQ=255)
                             aGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                       >  2:1371423/1‑147 (MQ=255)
                             aGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                       <  1:1371423/147‑1 (MQ=255)
                               tgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAg                                                  >  2:2433272‑M2/49‑150 (MQ=255)
                               gCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa                                                                            >  1:288439/1‑124 (MQ=255)
                               gCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTa                                                                            <  2:288439/124‑1 (MQ=255)
                               gCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAg                                                  >  2:1489730/1‑150 (MQ=255)
                                gctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATCGCCTGAATATAAAGAGGGAAAAGCAGGTTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGc                                                 <  1:1597220‑M2/103‑1 (MQ=255)
                                 ccTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGAGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGCAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCa                                                >  1:2922846/1‑150 (MQ=255)
                                  cTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCAt                                               >  2:1590347/1‑150 (MQ=255)
                                          tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGc                                                                                                 >  1:96824/1‑92 (MQ=255)
                                          tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGc                                                                                                 <  2:96824/92‑1 (MQ=255)
                                          tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATAc                                       >  1:129377/1‑150 (MQ=255)
                                            tgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAata                                                                                                               >  2:303882/1‑76 (MQ=255)
                                            tgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAata                                                                                                               <  1:303882/76‑1 (MQ=255)
                                              cAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTcc                                                                      <  1:2121031/115‑1 (MQ=255)
                                              cAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTcc                                                                      >  2:2121031/1‑115 (MQ=255)
                                              cAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGAt                                   >  2:2231716/1‑150 (MQ=255)
                                               aaTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGt                                                                                                                                         <  1:2460733/47‑1 (MQ=255)
                                               aaTCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGt                                                                                                                                         >  2:2460733/1‑47 (MQ=255)
                                                 tCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCCGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATga                                             <  2:1774630/137‑1 (MQ=255)
                                                 tCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATga                                             >  1:1774630/1‑137 (MQ=255)
                                                   cctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                       >  2:1702928‑M2/29‑125 (MQ=255)
                                                   cctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGa                                                       <  1:1702928‑M2/97‑1 (MQ=255)
                                                     tgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGc                            <  1:2433272‑M2/124‑1 (MQ=255)
                                                           agcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAAGACTGATCATTGGCCCCAGc                      >  2:713829‑M2/21‑150 (MQ=255)
                                                            gcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCt                     >  1:1734086‑M2/20‑150 (MQ=255)
                                                            gcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCt                     >  2:1119955‑M2/20‑150 (MQ=255)
                                                              gggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCTGTAACCCCAGCTgg                   >  1:2930037‑M2/18‑150 (MQ=255)
                                                              gggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTgg                   <  1:541868‑M2/133‑1 (MQ=255)
                                                               ggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGtt                                                             >  1:44894‑M2/17‑107 (MQ=255)
                                                               ggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGtt                                                             <  2:44894‑M2/91‑1 (MQ=255)
                                                               ggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTgg                             <  1:635390‑M2/123‑1 (MQ=255)
                                                               ggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTgg                             >  2:635390‑M2/17‑139 (MQ=255)
                                                                gcttgcccgcgaataGGCCATGTGAGTGGTATACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt                 >  2:2454251‑M2/16‑150 (MQ=255)
                                                                gcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt                 >  1:318126‑M2/16‑150 (MQ=255)
                                                                  ttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt                 <  1:1476391‑M2/135‑1 (MQ=255)
                                                                  ttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGt                 >  2:1476391‑M2/14‑148 (MQ=255)
                                                                      ccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCTGcgc           >  2:1770376‑M2/10‑149 (MQ=255)
                                                                      ccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGa           >  2:2863696‑M2/10‑150 (MQ=255)
                                                                       cgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAc          >  1:1614002‑M2/9‑150 (MQ=255)
                                                                       cgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAc          >  1:1613859‑M2/9‑150 (MQ=255)
                                                                          gaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                  >  2:332581‑M2/6‑91 (MQ=255)
                                                                          gaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa                                                                  <  1:332581‑M2/86‑1 (MQ=255)
                                                                          gaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATg       <  2:458309‑M2/145‑1 (MQ=255)
                                                                               ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGc                                                 >  2:1142685/1‑103 (MQ=255)
                                                                               ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGc                                                 <  1:1142685/103‑1 (MQ=255)
                                                                               ggCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGAt  <  2:2273659/150‑1 (MQ=255)
                                                                               |                                                                                                                                                     
GGGCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGGTGAT  >  NC_002947/414004‑414232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.