New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 741972 | NA (NA) | 4 (0.040) | 4/236 | NT | NA | coding (70/1422 nt) | PP_0635 | group II intron‑encoding maturase |
? | NC_002947 | = 741999 | NA (NA) | coding (97/1422 nt) | PP_0635 | group II intron‑encoding maturase |
TCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAACGCGTGGTTA > NC_002947/741970‑742122 | tcctCCCGAGCTCCGGCCAGAAGCCGAAAGTGACGCCTGACAATGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGAGGAGCCGGACACGCTGATGGAGAGGGTGCTTGCACCGGACAACCTAAGGCGTCCGTATCAACGCGTgg > 2:1402397/4‑150 (MQ=1) tctcGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAACGCGTGGTTa < 1:501623/147‑1 (MQ=1) | TCATCCCGAGCTCCGGCCAGAAGCCGAGGGTGACGCCTGACAGTGCAAAGGTATCGACGGCGTCCGTGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGCGTATCAACGCGTGGTTA > NC_002947/741970‑742122 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |