New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1570443 =	58 (0.510)	8 (0.090)	8/192	NT	20.9%	intergenic (+9/‑179)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	1570521 =	15 (0.170)					intergenic (+87/‑101)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease

GGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTAC‑CGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCTTC  >  NC_002947/1570372‑1570669                                                                                                                                                       |                                                                                                                                                      ggCCTGGCGAACATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAG‑AACATCGCCGTCAACTCCGCCTCTTCACGGGGAAGCCAGATCCAACAGGGATCCACGATATCTCCTGTGTGAGCGGGCTTCCCCGCGAAGAGGCct                                                                                                                                                       <  1:1465571/150‑1 (MQ=255)         gACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTAC‑CGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCACGCGAAGAGGCCTCTCCtgtg                                                                                                                                               >  1:1620270/1‑150 (MQ=255)                                            tGGCCATCGAGCGGGTTTGACCTGTAC‑CGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAGAGGGCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAAc                                                                                                            <  1:1906160/150‑1 (MQ=39)                                                                            ctcttcgcggggaagcccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagcggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACAAGT‑GTGTTACTAGGTATGTCTAGAACTAcc                                                                            >  2:2489391‑M2/76‑150 (MQ=255)                                                                             tcttcgcggggaagcccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt‑gt                                                                                                     <  1:2525127‑M2/50‑1 (MQ=255)                                                                             tcttcgcggggaagcccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt‑gt                                                                                                     >  2:2525127‑M2/75‑124 (MQ=255)                                                                                   CGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGAcc                                                                     <  2:1757297‑M1/150‑1 (MQ=255)                                                                                    GGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                                                                                                          <  2:2653118‑M1/113‑1 (MQ=255)                                                                                    GGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                                                                                                          >  1:2653118‑M1/1‑113 (MQ=255)                                                                                      GGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTc                                                                  <  2:1692114‑M1/150‑1 (MQ=255)                                                                                           cccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAg                                                                                                         <  1:1155957‑M2/47‑1 (MQ=255)                                                                                           cccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAg                                                                                                         >  2:1155957‑M2/61‑107 (MQ=255)                                                                                           CCCGCTCCAACAGGGATCCACGCAATGACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCGAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTACAGGa                                                             <  2:1293254‑M1/150‑1 (MQ=255)                                                                                           CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGAt                                                                                                                    <  2:2575383‑M1/96‑1 (MQ=255)                                                                                           CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGAt                                                                                                                    >  1:2575383‑M1/1‑96 (MQ=255)                                                                                           CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                                                             <  2:1417697‑M1/150‑1 (MQ=255)                                                                                            ccgctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAg                                                            >  1:611181‑M2/60‑150 (MQ=255)                                                                                              gctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGAc                                                                                                                                           <  2:1393193‑M2/13‑1 (MQ=255)                                                                                              gctcccacaggtgattgcgtggatccctgttggagcgggcttccccgcgaagaggccTCTCCTGTGAGAc                                                                                                                                           >  1:1393193‑M2/58‑70 (MQ=255)                                                                                                  CAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAg                                                                                             >  1:848666‑M1/1‑111 (MQ=255)                                                                                                  CAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAg                                                                                             <  2:848666‑M1/111‑1 (MQ=255)                                                                                                  CAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAcc                                                      <  2:1848637‑M1/150‑1 (MQ=255)                                                                                                   aaCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc                                                     >  1:710366/1‑150 (MQ=255)                                                                                                        ggATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCAt                                                >  1:1183254/1‑150 (MQ=255)                                                                                                             cACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCt                                                                           >  2:2166624/1‑118 (MQ=255)                                                                                                             cACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCt                                                                           <  1:2166624/118‑1 (MQ=255)                                                                                                             cACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCt                                           >  2:237935/1‑150 (MQ=255)                                                                                                             cACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCt                                           >  1:1742028/1‑150 (MQ=255)                                                                                                                gCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCaa                                        <  1:1692114/150‑1 (MQ=255)                                                                                                                 cAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAc                                       >  2:824027/1‑150 (MQ=255)                                                                                                                  aaTCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAcc                                      <  2:710366/150‑1 (MQ=255)                                                                                                                      aCCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTAtt                                  >  2:1069251/1‑150 (MQ=255)                                                                                                                      aCCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTAtt                                  <  1:824027/150‑1 (MQ=255)                                                                                                                       ccTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTa                                 <  1:1069251/150‑1 (MQ=255)                                                                                                                       ccTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTa                                 >  2:2249420/1‑150 (MQ=255)                                                                                                                        cTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGAccc                                                                    <  2:2265758/114‑1 (MQ=255)                                                                                                                        cTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGAccc                                                                    >  1:2265758/1‑114 (MQ=255)                                                                                                                         tgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTa                                                                                              >  2:462463/1‑87 (MQ=255)                                                                                                                         tgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTa                                                                                              <  1:462463/87‑1 (MQ=255)                                                                                                                         tgtgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTaca                               <  1:1417697/150‑1 (MQ=255)                                                                                                                           tgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAg                                                                                   <  2:436800/96‑1 (MQ=255)                                                                                                                           tgGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAg                                                                                   >  1:436800/1‑96 (MQ=255)                                                                                                                             ggagcgggcttccccgcgaagaggccTCTCGTTTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCgg                           >  1:79835‑M2/27‑150 (MQ=255)                                                                                                                              gagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGc                          <  1:1848637‑M2/125‑1 (MQ=255)                                                                                                                              gagcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGc                          >  2:1988424‑M2/26‑150 (MQ=255)                                                                                                                               agcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAgg                                                                                            <  1:1526762‑M2/59‑1 (MQ=255)                                                                                                                               agcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAgg                                                                                            >  2:1526762‑M2/25‑83 (MQ=255)                                                                                                                                gcgggcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCga                        >  2:303880‑M2/24‑150 (MQ=255)                                                                                                                                    gcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAg                                                                                   >  2:300456‑M2/20‑87 (MQ=255)                                                                                                                                    gcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAg                                                                                   <  1:300456‑M2/68‑1 (MQ=255)                                                                                                                                    gcttccccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCgacgaa                    >  1:556159‑M2/20‑150 (MQ=255)                                                                                                                                         cccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGAGAAGAACgcag               >  1:1669592‑M2/15‑150 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg                                                               <  2:759680‑M2/88‑1 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAg                                                               >  1:759680‑M2/14‑101 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCaa                                        >  1:2499969‑M2/14‑124 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCaa                                        <  2:2499969‑M2/111‑1 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTa                                 >  1:301125‑M2/14‑131 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTa                                 <  2:301125‑M2/118‑1 (MQ=255)                                                                                                                                          ccgcgaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgcagc              >  1:1889574‑M2/14‑150 (MQ=255)                                                                                                                                              gaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgcag               >  2:2679041‑M2/10‑145 (MQ=255)                                                                                                                                              gaagaggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACgcag               <  1:2679041‑M2/136‑1 (MQ=255)                                                                                                                                                  aggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATTG‑GGAAGGTGTCGTATGACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCAt      <  2:79835‑M2/145‑1 (MQ=255)                                                                                                                                                  aggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc                                                     >  2:1976246‑M2/6‑103 (MQ=255)                                                                                                                                                  aggccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAAccc                                                     <  1:1976246‑M2/98‑1 (MQ=255)                                                                                                                                                    gccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCt    >  1:1862752‑M2/4‑150 (MQ=255)                                                                                                                                                    gccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCt    >  1:290276‑M2/4‑150 (MQ=255)                                                                                                                                                    gccTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGCAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCt    >  1:754241‑M2/4‑150 (MQ=255)                                                                                                                                                      cTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACATAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCTTc  >  1:328938‑M2/2‑150 (MQ=255)                                                                                                                                                       |                                                                                                                                                      GGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTAC‑CGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGT‑GTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACCTATTACACCGGCGAAGAACGCAGCAAGCGCATCTTC  >  NC_002947/1570372‑1570669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.