New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2530824 =33 (0.290)16 (0.150) 9/228 NT 16.8% coding (20/369 nt) PP_2219 hypothetical protein
?NC_002947 = 4022407 128 (1.200)intergenic (‑58/+610) PP_3547/emrB NAD(P)‑binding oxidoreductase/multidrug transporter permease

Only 100 of 177 total aligned reads displayed.

CTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGAC  >  NC_002947/4022258‑4022556
                                                                                                                                                     |                                                                                                                                                     
cttttgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGTCGCGGTCCTGCCGGGa                                                                                                                                                       <  1:1679977/150‑1 (MQ=255)
cttttgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGa                                                                                                                                                       <  1:1774806/150‑1 (MQ=40)
 ttttGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAg                                                                                                                                                      <  2:598599‑M2/150‑2 (MQ=255)
       tCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggc                                                                                                                                                <  2:3024736‑M2/150‑8 (MQ=255)
       tCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAg                                                                                                                                                      <  1:2817‑M2/144‑2 (MQ=255)
         tggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCg                                                                                                                                              >  2:299758/1‑150 (MQ=34)
         tGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaag                                                                                                                                                  >  2:224039‑M2/1‑141 (MQ=255)
         tGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaag                                                                                                                                                  <  1:224039‑M2/146‑6 (MQ=255)
          ggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCgg                                                                                                                                             >  2:973945/1‑150 (MQ=33)
          ggcttttgatctTGATCTTGATCTTGATCTTCGCGACTGCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCgg                                                                                                                                             >  2:1774887/1‑150 (MQ=18)
           gcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGa                                                                                                                                            <  1:1568021/150‑1 (MQ=32)
               ttgatcttgatcttgatcttgatcTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcc                                                                                                                                               >  2:254716‑M2/1‑135 (MQ=255)
                   tcttgatcttgatcttgatcttCGCGACTTCAGCAGGCCGAACGCAGGCCTTGCGGCGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGCCCCGCCGGGAGCAAGGCCCGAGTGAGGGa                                                                                                                                    >  2:293430/1‑150 (MQ=11)
                    cttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaagg                                                                                                                                                 >  1:175464‑M2/1‑130 (MQ=255)
                     ttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAc                                                                                                                                  >  1:573296/1‑150 (MQ=32)
                      tgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAcc                                                                                                                                 <  2:1704089/150‑1 (MQ=32)
                        atcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAcccc                                                                                                                               <  2:1926767/150‑1 (MQ=32)
                                 ttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGagcgcag                                                                                                                      >  1:2907810/1‑150 (MQ=32)
                                       ttCGCGACTTCAGGAGGCCGAACCCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGAACGTCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAgg                                                                                                                <  1:728153/150‑1 (MQ=255)
                                              cTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGga                                                                                                         >  2:1645565/1‑150 (MQ=32)
                                                  aggaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGgatgat                                                                                                     >  1:2422503/1‑150 (MQ=32)
                                                   ggaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGTATTGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGatgatg                                                                                                    >  1:995747/1‑150 (MQ=17)
                                                   ggaggCCGAACGCAGGCCCTGCGGAGGCAGGTCACGGGCATGGATGCCCGTCAAGCCATGAGGACCCAGGGTGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGatgatg                                                                                                    <  1:1799369/150‑1 (MQ=11)
                                                    gaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATgg                                                                                                   <  1:1140098/150‑1 (MQ=32)
                                                      ggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa                                                                                                 <  1:1645565/150‑1 (MQ=32)
                                                       gCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGgat                                                                                                        <  2:1042363/142‑1 (MQ=32)
                                                       gCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGgat                                                                                                        >  1:1042363/1‑142 (MQ=32)
                                                          gAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggccggcgttcggcctcctgaagtcgc                                                                                                                        <  1:2488031‑M2/123‑32 (MQ=255)
                                                          gAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGgcgcgc                                                                                             >  1:813764/1‑150 (MQ=17)
                                                           aaCGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCa                                                                                            <  1:1972947/150‑1 (MQ=32)
                                                           aaCGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATCAAACGCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCa                                                                                            <  1:808726/150‑1 (MQ=11)
                                                                aGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtt                                                                                       >  2:2391667/1‑150 (MQ=32)
                                                                 tgcCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaag                                                                                      <  2:2629909‑M2/149‑66 (MQ=255)
                                                                   ccTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGttttt                                                                                    >  2:2896453/1‑150 (MQ=32)
                                                                    cTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAACGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttttt                                                                                   >  2:631340/1‑150 (MQ=17)
                                                                     ttGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTg                                                                                  <  1:2391667/150‑1 (MQ=32)
                                                                       gCGGAGCCACCTGACGGGCATGGATCCCCATCAAGCGCTGAGCCTCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGt                                                                                <  1:1410309/150‑1 (MQ=11)
                                                                        cGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGtt                                                                               >  2:1211310/1‑150 (MQ=32)
                                                                        cGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGtt                                                                               <  1:973945/150‑1 (MQ=32)
                                                                         ggAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTa                                                                              >  2:1783847/1‑150 (MQ=32)
                                                                               gcttgacGGGCATCCATGCCCGTCACGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcc                                                                                                                                               >  2:2860743‑M2/4‑71 (MQ=255)
                                                                               gcttgacGGGCATCCATGCCCGTCACGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcc                                                                                                                                               <  1:2860743‑M2/76‑9 (MQ=255)
                                                                               aGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACttttt                                                                        <  2:855819/150‑1 (MQ=32)
                                                                                ggTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaaga                                                                                                 >  1:2577641‑M2/1‑70 (MQ=255)
                                                                                ggTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaaga                                                                                                 <  2:2577641‑M2/124‑55 (MQ=255)
                                                                                ggTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttttt                                                                                   <  2:931554/138‑1 (MQ=33)
                                                                                ggTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGtttttt                                                                                   >  1:931554/1‑138 (MQ=33)
                                                                                 ttGACGGGCATCCATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGt                                                                      >  2:1136677/2‑150 (MQ=12)
                                                                                   gACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGag                                                                                                                           >  1:2381265/1‑95 (MQ=34)
                                                                                      gggCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGa                                                                                                                            >  1:3009404/1‑91 (MQ=34)
                                                                                      gggCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGt                                                                 >  2:2352763/1‑150 (MQ=32)
                                                                                        gCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt                                                               <  1:299758/150‑1 (MQ=32)
                                                                                        gCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt                                                               >  1:2889788/1‑150 (MQ=32)
                                                                                        gCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCAGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt                                                               >  1:676272/1‑150 (MQ=17)
                                                                                         cATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATgg                                                                                                   <  1:1217218/113‑1 (MQ=33)
                                                                                          aTGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa                                                             <  2:2422503/150‑1 (MQ=32)
                                                                                            ggATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAggg                                                                                                               >  1:1257415/1‑98 (MQ=34)
                                                                                            ggATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAggg                                                                                                               <  2:1257415/98‑1 (MQ=34)
                                                                                               tGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaa                                                        <  2:155123/150‑1 (MQ=32)
                                                                                                gCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaag                                                                                                                                                  <  2:2758092‑M2/59‑6 (MQ=255)
                                                                                                gCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaag                                                                                                                                                  >  1:2758092‑M2/1‑54 (MQ=255)
                                                                                                gCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaag                                                                                                                                                  >  2:1937019‑M2/1‑54 (MQ=255)
                                                                                                gCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACaaaaa                                                       <  1:2132557/150‑1 (MQ=32)
                                                                                                  ccGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAg                                                      >  1:378031/1‑149 (MQ=32)
                                                                                                  ccGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGt                                                     <  1:2352763/150‑1 (MQ=32)
                                                                                                  ccGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGt                                                     >  1:2472976/1‑150 (MQ=32)
                                                                                                    gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCTCCcaaggcctgcgttcggcctcctgaagtcgcgaagatcaa                                                                                                                 >  2:2863283‑M2/1‑50 (MQ=255)
                                                                                                    gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaagg                                                                                                                                                 >  1:1311290‑M2/1‑50 (MQ=255)
                                                                                                    gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaagg                                                                                                                                                 <  2:1311290‑M2/56‑7 (MQ=255)
                                                                                                    gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGa                                                   <  2:2891575/150‑1 (MQ=32)
                                                                                                    gTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTGTGTCGCGTTTGACAAAAAGTGa                                                   <  1:1211310/150‑1 (MQ=17)
                                                                                                     tCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGAc                                                  <  2:995747/150‑1 (MQ=32)
                                                                                                       aaGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTc                                                >  2:703345/1‑150 (MQ=32)
                                                                                                        aGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCg                                               >  1:1345358/1‑150 (MQ=32)
                                                                                                           gcTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaaga                                                                                                       <  1:1021132‑M2/91‑49 (MQ=255)
                                                                                                              gAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTaa                                         >  2:2658761/1‑150 (MQ=32)
                                                                                                                ggCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCAGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAgg                                       <  2:1345358/150‑1 (MQ=17)
                                                                                                                  ccccAGGATGGGGCCTTCGGCGCGGTCCTGCCGTGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGc                                     <  1:2416423/150‑1 (MQ=17)
                                                                                                                   cccAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGaa                                                                                                                                   <  2:2152671/55‑1 (MQ=33)
                                                                                                                   cccAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGaa                                                                                                                                   >  1:2152671/1‑55 (MQ=33)
                                                                                                                   cccAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTc                                                                     <  2:1429527/117‑1 (MQ=32)
                                                                                                                    ccAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGa                                   >  1:1398317/1‑150 (MQ=32)
                                                                                                                        atctgggCCTTCGGCCGGGTCCTTCTCAGACCAAGTCCTTAGTGATGGAACCCCGGAGCGCAGCGCCGCCTCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAg                               <  1:532230/146‑1 (MQ=11)
                                                                                                                          tGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGt                             <  1:1783847/150‑1 (MQ=32)
                                                                                                                            gggCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaacggcaacggcaacggcaaaggcaacggcaacggcaa                           >  1:2629909‑M2/1‑26 (MQ=255)
                                                                                                                            gggCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGa                           <  2:2472976/150‑1 (MQ=32)
                                                                                                                            gggCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGa                           <  1:1197411/150‑1 (MQ=32)
                                                                                                                            gggCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGAGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCACGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGa                           <  2:85106/150‑1 (MQ=17)
                                                                                                                             ggCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTTGAGTTTGACAAGAAGTGACTCGCCGTAAGGGCGAAAAGgagat                          >  2:532230/1‑149 (MQ=255)
                                                                                                                             ggCCTTCGGCGCGCTCCTGCAGGGAACCAGGACGACGAGGGACAACCCCGTAGCGCAGCTGAGGGTCCGGATGAGGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAg                          >  2:31557/1‑150 (MQ=11)
                                                                                                                              gCCTTCGGCGCGGTCCTGCCGGGAgcaaggcctgcgttcggcctcctgaagtcgcgaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaacggcaacggcaacggcaacggcaacggcaacggcaacg                         <  2:2810880‑M2/150‑127 (MQ=255)
                                                                                                                              gCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGt                         <  1:1546388/150‑1 (MQ=32)
                                                                                                                               ccTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGt                                                                      <  2:2419484/104‑1 (MQ=32)
                                                                                                                                cTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa                                                                                                 <  2:459413/76‑1 (MQ=35)
                                                                                                                                cTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGa                                                                                                 >  1:459413/1‑76 (MQ=35)
                                                                                                                                 ttCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAg                      >  2:2118626/1‑150 (MQ=32)
                                                                                                                                        cgGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGt                             >  1:1909610/1‑136 (MQ=33)
                                                                                                                                                 cGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGa                           <  1:2320478/129‑1 (MQ=33)
                                                                                                                                                 cGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGa                           >  2:2320478/1‑129 (MQ=33)
                                                                                                                                                 cGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAac      <  2:1841098/150‑1 (MQ=39)
                                                                                                                                                     |                                                                                                                                                     
CTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGATGGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACAAAAAGTGACTCGCCGTAAGGGCGAAAAGGTGAGTCAGCGTCGCCATCGCAAACGGAC  >  NC_002947/4022258‑4022556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.