| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2991565 | 114 (1.000) | 8 (0.070) | 7/230 | NT | 7.0% | intergenic (‑43/+32) | vgrG‑I/hcpC‑I | type VI secretion system protein/hemolysin‑coregulated protein |
| ? | NC_002947 | 4611105 = | 105 (0.970) | intergenic (+21/‑2086) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein | |||||
Only 100 of 139 total aligned reads displayed.
CACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGC > NC_002947/4610957‑4611248 | cACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAg < 1:1841898/150‑1 (MQ=39) tCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGcc > 2:852805/1‑150 (MQ=39) tCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGcc > 2:3040615/1‑150 (MQ=39) aGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGc > 2:593708/1‑142 (MQ=39) aGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGc < 1:593708/142‑1 (MQ=39) gACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATg > 2:494565/1‑145 (MQ=38) aCAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATg‑c‑ccgcc > 2:2409740/1‑150 (MQ=38) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGCATCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCggg > 1:938852/1‑150 (MQ=255) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCGGGCATGG‑C‑CTGCCCggg < 1:485691/150‑1 (MQ=11) aaaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCt < 1:3040615/150‑1 (MQ=37) tcgcggagttcgaacgacaccacttcgaatgcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgtctgaatcaacacaaagcccgggcAGGCCATG‑C‑CCGCCCGGGCtt > 1:1670146‑M2/130‑150 (MQ=255) cTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCTGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTtgt < 1:288286/150‑1 (MQ=255) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAgg > 1:116809/1‑123 (MQ=40) ccAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAgg < 2:116809/123‑1 (MQ=40) aGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTc > 1:1073330/1‑150 (MQ=37) aGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCATGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTtgt < 2:1065011/142‑1 (MQ=38) aGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCATGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTtgt > 1:1065011/1‑142 (MQ=38) cTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAg < 2:2654472/150‑1 (MQ=35) gTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCttt > 1:878395/1‑135 (MQ=37) accacttcgaattcagctttgccaacgagtgcctcaaagctgtagcgcaaatcagattggctaggcataaaagatccttgtccgccgcctgacccgtgcaaatgccccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGAcgg < 1:1276419‑M2/38‑1 (MQ=255) aaGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGAcggcgg > 2:1268928/1‑150 (MQ=35) tATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAgac < 2:942734/110‑3 (MQ=38) tATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAgac > 1:942734/1‑108 (MQ=38) cTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGAt < 1:2409740/150‑1 (MQ=35) cTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGAt < 2:1595464/150‑1 (MQ=35) gTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCtttt > 2:1633967/1‑150 (MQ=35) tATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTa > 1:3014358/1‑150 (MQ=35) aTCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 1:1057436/150‑1 (MQ=35) gAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGcc > 2:1501989/1‑150 (MQ=34) aaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTa < 2:2551436/150‑1 (MQ=35) aaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTa < 2:296479/150‑1 (MQ=35) gATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc > 2:792829/1‑150 (MQ=35) aTCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGcc > 2:1289812/1‑150 (MQ=34) tCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCa > 2:1554400/1‑150 (MQ=35) aCGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGTGCTTTGTGTTGATTCAGACGGCGGACGAGGAGCGTTTATGCCTAGCCAAt > 2:2173734/1‑150 (MQ=255) aCGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAAt > 2:1778867/1‑150 (MQ=35) cGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTACAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc > 2:156665/1‑150 (MQ=25) tGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa < 2:2116452/146‑1 (MQ=35) tGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa > 1:2116452/1‑146 (MQ=35) gggCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGa < 1:2376455/150‑1 (MQ=35) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCa < 1:1397089/82‑1 (MQ=40) cTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAttt > 2:652416/1‑150 (MQ=35) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGtt < 2:2219204/102‑1 (MQ=38) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGtt > 1:2219204/1‑102 (MQ=38) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt > 2:1431892/1‑131 (MQ=35) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTAt < 1:1431892/131‑1 (MQ=34) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc > 2:2405384/1‑138 (MQ=37) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc < 1:2405384/138‑1 (MQ=37) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCAACGTCTCCTCCATGGTTTTGAGTT‑‑CGGAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 1:1896391/1‑150 (MQ=11) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGTCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc < 1:1989165/136‑1 (MQ=37) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCt > 1:732427/1‑142 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCt < 2:732427/142‑1 (MQ=35) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg > 1:1273379/1‑150 (MQ=35) cGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcgc < 2:1218189/150‑1 (MQ=35) tGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTAc > 2:2145237/1‑150 (MQ=35) aGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGc > 1:287823/1‑150 (MQ=34) cAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCttt > 1:1560407/1‑150 (MQ=35) cAATACCGAAGGCTCTGACGACTCGCGCGCCCCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCttt < 2:938852/150‑1 (MQ=21) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 1:1633967/150‑1 (MQ=34) tACCGAAGGCTCTGACGCCTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 2:2592575/150‑1 (MQ=18) tACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 1:652416/150‑1 (MQ=33) tACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 1:116697/150‑1 (MQ=32) tACCGAAGGCCCTGACGTCTGGCGCGCACCCGCGGGCTGCCCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGTCTTTGTGTATATTCAGACGGCGGACCAGGATCTTTTATGCCTAGCCAATCTGCTTTGCGCTACAGCTTTGAg < 2:312115/150‑1 (MQ=11) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa < 1:2145237/150‑1 (MQ=32) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACACGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGGTCTTTTATGCCTAGCCGATCTCATTTGCGCTAGAGCTTTGAggaa > 2:1366293/1‑148 (MQ=11) ctctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGtt > 2:1369554/1‑150 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:1073330/150‑1 (MQ=32) tctGACACCTGGCGCCCCCCCGCCACCTTACCCGTTCAGTTCCCCCAGTCACGCCCTG‑C‑ACGCCCGGTCGTTGTGTTTATTCAGACCGCGGACAAGGATCTTTTATGCCTAGCAAATCTGATTTGCGCCACAGCTGTGAGGCACTTGtag < 2:1175364/150‑3 (MQ=2) tGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc < 1:1827396/116‑1 (MQ=33) tGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc > 2:1827396/1‑116 (MQ=33) gacTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCGTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATATGAGTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg > 1:489242/1‑150 (MQ=12) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTCGCCAATCTGATTTGCGCTACCGCTTTGAGGCACTCGTTGGCAAAGCTGaa < 1:546182/150‑1 (MQ=18) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGaa > 1:391105/1‑150 (MQ=34) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGaa < 2:287823/150‑1 (MQ=34) aCCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCggg < 1:1204807/51‑1 (MQ=35) aCCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGaa > 1:1987478/1‑150 (MQ=35) gtccgccgtctgaatcaacacaaagcccgggcAGGCCATG‑C‑CCGCCCGGGCTTtgt < 1:632137‑M2/24‑1 (MQ=255) cccGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAg < 1:2131799/150‑1 (MQ=34) ccgccgCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgt > 2:2699188/1‑150 (MQ=35) ccgccTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtggt < 1:2699188/150‑1 (MQ=35) ccgccTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtggt > 1:1795577/1‑150 (MQ=35) gccTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGgtgt < 2:1896391/150‑1 (MQ=35) tGACCCGTTCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGt > 2:794254/1‑150 (MQ=25) aCCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTc < 2:391105/150‑1 (MQ=35) aCCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTc < 1:3025638/150‑1 (MQ=35) ccGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATCCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgc < 2:2257937/95‑1 (MQ=17) tcaacacaaagcccgggcGGGCATGG‑C‑CTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGCATTCGAAGTGGTGTCGTTCGaa > 2:1670146‑M2/19‑150 (MQ=255) cGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGc < 2:2853045/37‑1 (MQ=33) cGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGc > 1:2853045/1‑37 (MQ=33) tGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACt > 1:2881338/1‑150 (MQ=32) aaTGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc > 1:1364231/1‑150 (MQ=32) aTGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc > 1:2771641/1‑149 (MQ=32) aTGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc < 2:2771802/149‑1 (MQ=32) gCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTTATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAg < 1:1554400/150‑1 (MQ=17) ccccGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAgg < 1:794254/150‑1 (MQ=32) cccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAggg > 2:1171975‑M2/8‑150 (MQ=255) ccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGa > 2:2880950‑M2/7‑77 (MQ=255) ccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGa > 1:2854607‑M2/7‑116 (MQ=255) ccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGc < 1:792829‑M2/144‑1 (MQ=255) ccgggcAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGc > 1:2241192‑M2/7‑150 (MQ=255) | CACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATG‑C‑CCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGC > NC_002947/4610957‑4611248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |