New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4575575124 (1.080)9 (0.090) 9/224 NT 6.6% intergenic (+49/‑73) glgX/ybhP‑II glycogen debranching enzyme/phosphohydrolase
?NC_002947 = 4575602 140 (1.330)intergenic (+76/‑46) glgX/ybhP‑II glycogen debranching enzyme/phosphohydrolase

Only 100 of 169 total aligned reads displayed.

TGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACC  >  NC_002947/4575453‑4575749
                                                                                                                                                     |                                                                                                                                                   
tGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTNGTGATCNCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCcaca                                                                                                                                                     <  1:1888849/150‑1 (MQ=255)
      tCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                                               >  2:23187‑M2/1‑144 (MQ=255)
      tCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                                               >  2:2801586‑M2/1‑144 (MQ=255)
            gTACGTTCGAGGTGAAGGGTCGGTCGCTGTGGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTggcggc                                                                                                                                         >  1:2862571/1‑150 (MQ=255)
                 ttCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAg                                                                                                                                    >  2:3018697/1‑150 (MQ=255)
                  tCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGt                                                                                                                                   <  1:1043804/150‑1 (MQ=255)
                      ggTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggttt                                                                                                                                               <  1:118201‑M2/134‑7 (MQ=255)
                          aaGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAgg                                                                                                                           <  1:693756/150‑1 (MQ=255)
                           aGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGTCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAggg                                                                                                                          <  2:2633577/150‑1 (MQ=255)
                              gtcggtcgATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTa                                                                                                                       >  1:904766/1‑150 (MQ=255)
                                  gtcgATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAgg                                                                                                                               >  2:1855103/1‑138 (MQ=255)
                                    cgATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCa                                                                                                                 <  2:603385/150‑1 (MQ=255)
                                      aTGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTg                                                                                                                                  >  1:2008528/1‑131 (MQ=255)
                                      aTGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTg                                                                                                                                  <  2:2008528/131‑1 (MQ=255)
                                       tgctgcTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCagga                                                                                                              <  2:2143477/150‑1 (MQ=255)
                                         ctgctgATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCaggagg                                                                                                            <  2:2869056/150‑1 (MQ=255)
                                               aTGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGa                                                                                                                                       <  1:763603/117‑1 (MQ=255)
                                                 ggTGTTGCAGTACGACGAGGAATGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGa                                                                                                    >  1:25330/1‑150 (MQ=255)
                                                      tGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTc                                                                                               <  1:3018697/150‑1 (MQ=255)
                                                         aGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGaa                                                                                            >  2:1172021/1‑150 (MQ=255)
                                                         aGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGaa                                                                                            <  2:2770611/150‑1 (MQ=255)
                                                         aGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGaa                                                                                            <  1:2447887/150‑1 (MQ=255)
                                                         aGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGaa                                                                                            <  1:2873591/150‑1 (MQ=255)
                                                          gTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATc                                                                                                        >  2:519337/1‑137 (MQ=255)
                                                          gTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATc                                                                                                        <  1:519337/137‑1 (MQ=255)
                                                          gTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGGTTGGCGGCGACAGTGAGGCAGGGTTGACTTCAGGAGGAATCGTGAGCCTCGAAg                                                                                           >  1:157726/1‑150 (MQ=255)
                                                           tACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCaggag                                                                                                             <  2:2601442/131‑1 (MQ=255)
                                                              gacgaGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCgg                                                                                       <  2:783647/150‑1 (MQ=255)
                                                              gacgaGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCgg                                                                                       >  1:2665015/1‑150 (MQ=255)
                                                                cgaGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCa                                                                                     <  1:98687/150‑1 (MQ=255)
                                                                 gaggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCg                                                                                        >  1:22660/1‑146 (MQ=255)
                                                                 gaggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCg                                                                                        <  2:22660/146‑1 (MQ=255)
                                                                   ggagTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTggcggc                                                                                                                                         <  1:2621503/95‑1 (MQ=255)
                                                                             gTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGc                                                                        >  1:1503207/1‑150 (MQ=255)
                                                                             gTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGc                                                                        >  1:1351772/1‑150 (MQ=255)
                                                                               gATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCa                                                                      >  1:2823327/1‑150 (MQ=255)
                                                                                  aGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAATGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCg                                                                   >  2:2666294/1‑150 (MQ=255)
                                                                                   gCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGt                                                                  >  2:981270/1‑150 (MQ=255)
                                                                                    cccAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTaa                                                                                 >  1:2026599/1‑134 (MQ=255)
                                                                                    cccAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTaa                                                                                 <  2:2026599/134‑1 (MQ=255)
                                                                                    cccAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTc                                                                 >  1:1101808/1‑150 (MQ=255)
                                                                                     ccAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGt                                                                                                                                   <  1:354560/83‑1 (MQ=255)
                                                                                     ccAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGt                                                                                                                                   >  2:354560/1‑83 (MQ=255)
                                                                                      caggcaggTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTaa                                                                                                                      <  1:2800504/95‑1 (MQ=255)
                                                                                      caggcaggTCCTACGTTGTGATCGCCACGCCAAACACGGTGGGAACCGTGTACATGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTAAg                                                               >  2:428772/1‑150 (MQ=255)
                                                                                       aggcaggTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGc                                                              >  2:1956711/1‑150 (MQ=255)
                                                                                            ggTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGtt                                                                            >  1:1199898/1‑131 (MQ=255)
                                                                                            ggTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGtt                                                                            <  2:1199898/131‑1 (MQ=255)
                                                                                             gTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGccc                                                       >  1:1812891/1‑150 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCag                                                                                                                <  1:1458822/93‑1 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCag                                                                                                                >  2:1458822/1‑93 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATc                                                                                                        >  2:805273/1‑101 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATc                                                                                                        <  1:805273/101‑1 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGccc                                                       >  1:1396559/1‑150 (MQ=255)
                                                                                              tCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGccc                                                       >  1:571601/1‑150 (MQ=255)
                                                                                               ccTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAg                                                                                    >  2:1592166/1‑120 (MQ=255)
                                                                                                gtACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCg                                                     >  2:2109481/2‑150 (MQ=255)
                                                                                                 tACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCgg                                                    <  1:2766754/150‑1 (MQ=255)
                                                                                                 tACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCgg                                                    <  2:2284698/150‑1 (MQ=255)
                                                                                                   cGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAGGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCACGGcc                                                  <  2:904766/150‑1 (MQ=255)
                                                                                                     ttGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCa                                                                                                                 <  2:1388683/85‑1 (MQ=255)
                                                                                                         gATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAg                                                                                                                                    >  1:2787532/1‑62 (MQ=255)
                                                                                                         gATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAg                                                                                                                                    <  2:2787532/62‑1 (MQ=255)
                                                                                                          aTCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCgg                                                                                       <  1:2567124/106‑1 (MQ=255)
                                                                                                          aTCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAAc                                           <  1:2248058/150‑1 (MQ=255)
                                                                                                              ccacgccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCagga                                                                                                              <  2:1166426/79‑1 (MQ=255)
                                                                                                              ccacgccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCagga                                                                                                              >  1:1166426/1‑79 (MQ=255)
                                                                                                                  gccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactat                                   >  2:2365984‑M2/1‑36 (MQ=255)
                                                                                                                  gccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactc                                                                                              <  2:2194959‑M2/91‑56 (MQ=255)
                                                                                                                  gccaAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCgg                                   >  1:2138557/1‑150 (MQ=255)
                                                                                                                    cagaCCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGt                                 >  1:3064280/4‑150 (MQ=255)
                                                                                                                     aaaCCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTa                                <  2:2665015/150‑1 (MQ=255)
                                                                                                                       aCCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGt                                                                                                      <  1:359615/78‑1 (MQ=255)
                                                                                                                       aCCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGt                                                                                                      >  2:359615/1‑78 (MQ=255)
                                                                                                                        cccGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTg                             >  2:935694/1‑150 (MQ=255)
                                                                                                                         ccGGTGGGAACGGTGTACCGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactatcgaattg                            <  2:216715‑M2/150‑122 (MQ=255)
                                                                                                                         ccGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGa                            >  2:1382938/1‑150 (MQ=255)
                                                                                                                         ccGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGa                            >  1:1651283/1‑150 (MQ=255)
                                                                                                                           ggTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACg                          <  1:1382938/150‑1 (MQ=255)
                                                                                                                             tGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGt                        <  2:2828614/150‑1 (MQ=255)
                                                                                                                                gAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCaggag                                                                                                             >  2:825029/1‑62 (MQ=255)
                                                                                                                                gAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCaggag                                                                                                             <  1:825029/62‑1 (MQ=255)
                                                                                                                                 aaCGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCCCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAAt                    >  2:2861545/1‑150 (MQ=255)
                                                                                                                                  aCGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGaaa                                            >  1:161031/1‑125 (MQ=255)
                                                                                                                                    ggTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAcc                 <  2:1101808/150‑1 (MQ=255)
                                                                                                                                    ggTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAcc                 >  2:2403376/1‑150 (MQ=255)
                                                                                                                                    ggTGTACCGGCCCCCACAGGGATTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAcc                 >  2:270091/1‑150 (MQ=255)
                                                                                                                                     gtgtACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAccc                >  2:1639038/1‑150 (MQ=255)
                                                                                                                                       gtACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACgg                         >  2:395597/1‑139 (MQ=255)
                                                                                                                                       gtACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACgg                         <  1:395597/139‑1 (MQ=255)
                                                                                                                                          ccGGCCCCCACAgggtttggcgtggcgatcacaacgtaggacctgcctgggctatcaccgttcactcctcgtcgtactgcaacaccatcagcagcatcgaccgacccttcacctcgaacgtactatcgaattgcaggtgctgcccattgc           >  2:98777‑M2/1‑12 (MQ=255)
                                                                                                                                          ccGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCggg                                  >  1:982039/1‑127 (MQ=255)
                                                                                                                                          ccGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCgg                                   <  1:2639013/126‑1 (MQ=255)
                                                                                                                                             gCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGc        <  2:515570/150‑1 (MQ=255)
                                                                                                                                              cccccACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCt       <  1:2311555/150‑1 (MQ=255)
                                                                                                                                               ccccACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAcc                 >  2:2910855/1‑139 (MQ=255)
                                                                                                                                               ccccACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATAcc                 <  1:2910855/139‑1 (MQ=255)
                                                                                                                                                  cacaGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCAc   >  1:589994/1‑150 (MQ=255)
                                                                                                                                                   acaGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAg                                                               >  2:291027/1‑89 (MQ=255)
                                                                                                                                                   acaGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCAcc  >  1:1266431/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
TGCAATTCGATAGTACGTTCGAGGTGAAGGGTCGGTCGATGCTGCTGATGGTGTTGCAGTACGACGAGGAGTGAACGGTGATAGCCCAGGCAGGTCCTACGTTGTGATCGCCACGCCAAACCCGGTGGGAACGGTGTACCGGCCCCCACAGGGTTTGGCGGCGACAGTGAGGCAGGGTTAACTTCAGGAGGAATCGTGAGCCTCGAAGCCGGCAGTAATGGTTTCGCCAGCGTCAGCCAGGCCCCGGCCGTGAAACGCCTGCGGGTACTGACGGTGAATACCCACAAGGGCTTCACC  >  NC_002947/4575453‑4575749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.