New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6000959 =102 (0.890)7 (0.080) 7/184 NT 11.8% intergenic (+10/+99) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase
?NC_002947 6001053 = 28 (0.320)intergenic (+104/+5) PP_5256/amaA cyclic nucleotide‑binding protein/L‑pipecolate oxidase

Only 100 of 105 total aligned reads displayed.

TTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAAC  >  NC_002947/6000907‑6001202
                                                                                                                                                  |                                                                                                                                                      
ttCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTa                                                                                                                                                     >  2:744/1‑150 (MQ=255)
     tcaaGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTac                                                                                                                                                >  1:2765006/1‑150 (MQ=255)
                           ttggttgCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTa                                                                                                                                                     <  1:1165927/123‑1 (MQ=255)
                           ttggttgCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTa                                                                                                                                                     >  2:1165927/1‑123 (MQ=255)
                                 gCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                                                                                                                    <  2:2104263/150‑1 (MQ=255)
                                   acaAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTgg                                                                                                                  >  1:1971458/1‑150 (MQ=255)
                                                        tcttcgcgggtaaacccgcgcctacaggttcaccacagccttctcaggcggtgcacgacttgtaggatcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑Ca                                                                                            >  1:1233836‑M2/91‑150 (MQ=255)
                                                           TCGCGGGTAAACCCGCTCCTACCAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAg                                                                                         >  2:2826512‑M1/1‑150 (MQ=255)
                                                            CGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGa                                                                                        <  2:2496276‑M1/150‑1 (MQ=255)
                                                               GGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACg                                                                                     <  1:2782774‑M1/150‑1 (MQ=255)
                                                                 gtaaacccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCCCTGCCCGGCTGGGTACAGCGAAAAACCGGACT‑CATAGAACGCt                                                                                   >  2:3021939‑M2/82‑150 (MQ=255)
                                                                 GTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCAc                                                                                                                              <  1:49374‑M1/108‑1 (MQ=255)
                                                                 GTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCAc                                                                                                                              >  2:49374‑M1/1‑108 (MQ=255)
                                                                    AACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGGTAACTTGGAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTc                                                                                <  2:434189‑M1/150‑1 (MQ=255)
                                                                    AACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGACTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTc                                                                                <  2:2066686‑M1/150‑1 (MQ=255)
                                                                     ACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTcc                                                                               <  1:1415635‑M1/150‑1 (MQ=255)
                                                                      CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCg                                                                              <  1:1241878‑M1/150‑1 (MQ=255)
                                                                      CCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCg                                                                              <  1:2165473‑M1/150‑1 (MQ=255)
                                                                       ccgctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGc                                                                             >  1:1018187‑M2/76‑150 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaac                                                                                                                                             <  1:380681‑M1/87‑1 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaac                                                                                                                                             <  2:1651591‑M1/87‑1 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaac                                                                                                                                             >  2:380681‑M1/1‑87 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTacaac                                                                                                                                             >  1:1651591‑M1/1‑87 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGc                                                                             <  2:472462‑M1/150‑1 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGc                                                                             <  1:1791797‑M1/150‑1 (MQ=255)
                                                                       CCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGc                                                                             <  1:584582‑M1/150‑1 (MQ=255)
                                                                         gctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccGGTACTTACAACACAACCCTCAGGCACTGCCCcgcg                                                                                                                     <  2:793887‑M2/36‑1 (MQ=255)
                                                                         gctcctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccGGTACTTACAACACAACCCTCAGGCACTGCCCcgcg                                                                                                                     >  1:793887‑M2/74‑109 (MQ=255)
                                                                          CTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACACGACAACCCTCAGGCACGGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGc                                                                          >  2:571617‑M1/1‑150 (MQ=255)
                                                                            CCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                                 <  2:2850328‑M1/126‑1 (MQ=255)
                                                                            CCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                                 >  1:2850328‑M1/1‑126 (MQ=255)
                                                                            CCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCAGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGcgg                                                                        <  2:639187‑M1/150‑2 (MQ=255)
                                                                             ctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATa                                                                                          >  2:2827918‑M2/70‑131 (MQ=255)
                                                                             ctacaggttcaccacagccctctcaggcggtgcactacttgtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATa                                                                                          <  1:2827918‑M2/62‑1 (MQ=255)
                                                                             CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCa                                                                                                                                   <  2:540634‑M1/91‑1 (MQ=255)
                                                                             CTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCa                                                                                                                                   >  1:540634‑M1/1‑91 (MQ=255)
                                                                               ACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   <  2:2253878‑M1/105‑1 (MQ=255)
                                                                               ACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   >  1:2253878‑M1/1‑105 (MQ=255)
                                                                                CAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   <  1:1668301‑M1/104‑1 (MQ=255)
                                                                                CAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   >  2:1668301‑M1/1‑104 (MQ=255)
                                                                                   gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGGCCCGGGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCGGCGAATgcgcg                                                                 >  2:386951/1‑150 (MQ=255)
                                                                                   gtagtGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGgcgcg                                                                 <  2:2724321/150‑1 (MQ=255)
                                                                                         cACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTcaca                                                           >  1:2658355/1‑150 (MQ=255)
                                                                                          aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTac                                                                                                                                                >  2:2172792/1‑65 (MQ=255)
                                                                                          aCCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCacac                                                          >  2:2746401/1‑150 (MQ=255)
                                                                                             gCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                                                                                                                    <  1:727500/90‑1 (MQ=255)
                                                                                             gCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGt                                                                                                                    >  2:727500/1‑90 (MQ=255)
                                                                                             gCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGc                                                       <  2:1241878/150‑1 (MQ=255)
                                                                                               cTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   >  2:2679823/1‑89 (MQ=255)
                                                                                               cTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTg                                                                                                                   <  1:2679823/89‑1 (MQ=255)
                                                                                                   gagGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCg                                                 >  2:1799846/1‑150 (MQ=255)
                                                                                                    agGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCgg                                                <  2:1415635/150‑1 (MQ=255)
                                                                                                     gggCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGc                                               >  2:1099281/1‑150 (MQ=255)
                                                                                                     ggacTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCACCGCGTGGTACAGCGAAAAACC‑CACTGCATATGACGCTTTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGc                                               <  1:2066686/147‑1 (MQ=38)
                                                                                                          gtggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGc                                                                          >  2:201576/1‑118 (MQ=255)
                                                                                                          gtggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGc                                                                          <  1:201576/118‑1 (MQ=255)
                                                                                                           tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGTACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGc                                                       >  1:2424173/1‑136 (MQ=255)
                                                                                                           tggtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGTACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGc                                                       <  2:2424173/136‑1 (MQ=255)
                                                                                                             gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAg                                                                                                             >  2:315263/1‑81 (MQ=255)
                                                                                                             gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAg                                                                                                             <  1:315263/81‑1 (MQ=255)
                                                                                                             gtgAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAGCGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACgg                                       >  2:2056982/1‑150 (MQ=255)
                                                                                                               gAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                                 <  1:2436749/91‑1 (MQ=255)
                                                                                                               gAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGa                                                                                                 >  2:2436749/1‑91 (MQ=255)
                                                                                                                  ccTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑AATAGACAGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTACTCGGAGAAAACGGAATCg                                  >  2:3000049/1‑150 (MQ=255)
                                                                                                                   cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg                                 >  2:1545883/1‑150 (MQ=255)
                                                                                                                   cTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCgg                                 <  1:2186600/150‑1 (MQ=255)
                                                                                                                     gtaggagcgggtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                               <  1:2056982‑M2/121‑1 (MQ=255)
                                                                                                                     gtaggagcgggtgtacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCa                               <  1:472462‑M2/121‑1 (MQ=255)
                                                                                                                               gtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                     >  1:2022590‑M2/20‑150 (MQ=255)
                                                                                                                               gtttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGc                     >  1:1802735‑M2/20‑150 (MQ=255)
                                                                                                                                tttacccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGcc                    >  2:2498476‑M2/19‑150 (MQ=255)
                                                                                                                                    cccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACg                                        >  2:1940956‑M2/15‑126 (MQ=255)
                                                                                                                                    cccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACg                                        <  1:1940956‑M2/112‑1 (MQ=255)
                                                                                                                                    cccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGc                <  1:3021939‑M2/136‑1 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑Ca                                                                                            <  2:2393039‑M2/60‑1 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑Ca                                                                                            >  1:2393039‑M2/14‑73 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGgcgcgc                                                                >  2:1242186‑M2/14‑101 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGgcgcgc                                                                <  1:1242186‑M2/88‑1 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCt                           >  2:2556071‑M2/14‑138 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCt                           <  1:2556071‑M2/125‑1 (MQ=255)
                                                                                                                                     ccgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGcc               >  1:1132611‑M2/14‑150 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCg                                                 <  2:884452‑M2/103‑1 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCg                                                 >  1:884452‑M2/13‑115 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGa                                      <  1:1986503‑M2/114‑1 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGa                                      >  2:1986503‑M2/13‑126 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGccc              <  2:2782774‑M2/138‑1 (MQ=255)
                                                                                                                                      cgcgaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGccc              <  1:982137‑M2/138‑1 (MQ=255)
                                                                                                                                       gcgaagaggccAGTACTTACAACACAACCCTCGGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGccc              >  2:332084‑M2/12‑149 (MQ=255)
                                                                                                                                       gcgaagaggccAGTACTTACAACACAACCCTCGGGCAATGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGccc              <  1:332084‑M2/138‑1 (MQ=255)
                                                                                                                                         gaagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTg           >  2:2759358‑M2/10‑150 (MQ=255)
                                                                                                                                          aagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCCCACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa          <  2:1233836‑M2/142‑1 (MQ=255)
                                                                                                                                          aagaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGa          <  1:2496276‑M2/142‑1 (MQ=255)
                                                                                                                                           agaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAAcc                                                                                                    <  2:2155040‑M2/53‑1 (MQ=255)
                                                                                                                                           agaggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAAcc                                                                                                    >  1:2155040‑M2/8‑60 (MQ=255)
                                                                                                                                             aggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCa       <  2:1132611‑M2/145‑1 (MQ=255)
                                                                                                                                             aggccAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCa       <  1:2759358‑M2/145‑1 (MQ=255)
                                                                                                                                                 cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CAt                                                                                           >  2:2479760‑M2/2‑62 (MQ=255)
                                                                                                                                                 cAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CAt                                                                                           <  1:2479760‑M2/61‑1 (MQ=255)
                                                                                                                                                  aGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAAc  >  2:1734381/1‑150 (MQ=255)
                                                                                                                                                  aGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAAc  >  2:2522786/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
TTCAATCAAGAAGGGTGGCTTCCTGAGTTGGTTGCACAAGTGAGCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAAGTAGTGCACCGCCTGAGAGGGCTGTGGTGAACCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTACTTACAACACAACCCTCAGGCACTGCCCCGCGTGGTACAGCGAAAAACCGGACT‑CATAGAACGCTGTCCGCAGCGAAGGCGCGCTCACACCGCTCATCGGCGAAAACGGAATCGGCAGGCTGTCCGCCTCGCCCTTGAGCAGGAAC  >  NC_002947/6000907‑6001202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.