| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,172 | A→T | 5.7% | intergenic (+57/+26) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,172 | 0 | A | T | 5.7% | 327.9 / 6.8 | 105 | intergenic (+57/+26) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (50/49); new base T (3/3); total (53/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36025‑36320 | gAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTaaaa > 2:761218/1‑150 (MQ=255) gCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAAcc < 1:1218240/150‑1 (MQ=255) gATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCt > 2:2660340/1‑149 (MQ=255) gATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCt < 1:2660340/149‑1 (MQ=255) aTGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTgg > 1:693869/1‑150 (MQ=255) aTGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTgg > 1:2630045/1‑150 (MQ=255) ctctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttt < 2:1873556/150‑1 (MQ=255) tctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttt > 1:2507849/1‑150 (MQ=255) ctTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCttttt < 1:1138452/150‑1 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt > 1:2069787/1‑150 (MQ=255) ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCtttttt > 2:1307937/1‑150 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCtttttt < 2:1170925/145‑1 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCtttttt > 1:1170925/1‑145 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCtt < 1:1307937/150‑1 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTg > 2:2921696/1‑150 (MQ=255) aGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTgg > 2:1634220/1‑150 (MQ=255) aGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTgg > 1:1858793/1‑150 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCAAGGGTAAAACATGGCTTTTTTCTGCTTGGa > 2:2308113/1‑150 (MQ=255) caaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTaaaa < 2:1358239/126‑1 (MQ=255) caaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTaaaa > 1:1358239/1‑126 (MQ=255) aacaacAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTa < 2:1094757/150‑1 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAg < 2:2630045/150‑1 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAg > 2:900723/1‑150 (MQ=255) cGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTc > 2:2226900/1‑150 (MQ=255) gCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCt < 2:802348/150‑1 (MQ=255) cTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCtt > 2:2690982/1‑150 (MQ=255) cTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCtt < 1:2921696/150‑1 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtgt < 2:1943255/125‑1 (MQ=39) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCTTTTTtgt > 1:1943255/1‑125 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑Cg > 1:1340477/1‑150 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑Cg > 2:2902311/1‑150 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑Cg > 2:1855422/1‑150 (MQ=255) agagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGa < 1:3049983/150‑1 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAg < 1:900723/150‑1 (MQ=255) aaaaGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGt > 1:588503/1‑150 (MQ=255) aaggaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGtt > 1:3069123/4‑150 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGttt > 2:636547/1‑150 (MQ=255) gaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTcc > 2:1788840/1‑150 (MQ=255) agCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGc < 1:2902311/150‑1 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGaa > 1:896846/1‑103 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGaa < 2:896846/103‑1 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGcc > 1:64754/1‑150 (MQ=255) aaGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCa < 1:1788840/150‑1 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGGCAGAc > 1:205182/1‑150 (MQ=255) gAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGAc > 1:965367/1‑150 (MQ=255) gCCAACAATTAATCCGCGGTTAAATAGAACGTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCTGTCTTG‑CGAGGCGTTTCGGCATTGCGTTCTCCGGACAGACCGTCgg > 2:201148/1‑150 (MQ=255) aaTTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCtt > 2:2730307/1‑150 (MQ=255) aTTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtg > 2:2034704/1‑150 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgg < 1:2730307/150‑1 (MQ=255) tCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgg > 2:2618889/1‑150 (MQ=255) gcggTTAAATAGGACTTCAAATGACGAAAGAAATCGATAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGGGTTTATCCTTCGTTCTTG‑TGCCGCCGGCCTTCAGTCCGGTCTCGGGCCAGACCCTCGGCACCTTGTGCGGGGc < 1:2065961/150‑1 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 2:205182/150‑1 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 2:3069123/150‑1 (MQ=255) tAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 2:2507849/150‑1 (MQ=255) aaaTAGGAGCTGAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTcc < 2:588503/150‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCa < 2:2485283/150‑1 (MQ=255) aTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa < 2:10349/150‑1 (MQ=255) aTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGATTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAACTTGTGCGGGGCGTTTCCaa > 2:1319930/1‑150 (MQ=255) ggACGTCAAATGACGAAAGAAATCGACAAAAAAGACAGGGTAAAACCTGGCTTTTTTGTGCTTAGCATTTTGCCCTCGTTCGTG‑CGAGGCGTTTCCGTATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 1:1145267/150‑1 (MQ=255) cTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcac < 1:636547/150‑1 (MQ=255) aaaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcagca < 2:1858793/150‑1 (MQ=255) aaaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACAGCATGGGGGGCGTTTCCAATGGCAcagca > 1:1682/1‑150 (MQ=255) aTGACGAAAGCAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGCCTTCAG‑GTGCGCGATTGTCGAGGCGTTTCCGCAGTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAgg < 1:2226900/150‑1 (MQ=255) aTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAgg > 2:611310/1‑150 (MQ=255) tGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTc > 1:146303/1‑67 (MQ=255) tGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTc < 2:146303/67‑1 (MQ=255) gACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAg > 1:1009439/1‑150 (MQ=255) aCGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgc < 1:199562/150‑1 (MQ=255) cGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 1:535882/1‑139 (MQ=255) cGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca < 2:535882/139‑1 (MQ=255) cGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 1:1829728/1‑150 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctg < 1:1062318/150‑1 (MQ=255) aaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGTAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 1:1907435/122‑1 (MQ=255) aaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg > 2:1907435/1‑122 (MQ=255) aaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctgg < 1:761218/150‑1 (MQ=255) gaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg < 1:611310/150‑1 (MQ=255) caagcaCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 2:1034667/119‑1 (MQ=37) caagcaCAAAAAAGCCAGGTTTTACCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 1:1034667/6‑124 (MQ=38) tCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa > 2:2301766/1‑125 (MQ=255) tCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa < 1:2301766/125‑1 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 2:2176369/1‑150 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 2:735477/150‑1 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 2:2944878/1‑150 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc > 1:424478/1‑150 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTc < 1:2618889/150‑1 (MQ=255) cAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGc < 2:1009439/150‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCa < 2:341587/88‑1 (MQ=255) aaaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCa > 1:341587/1‑88 (MQ=255) aaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGttt < 1:441583/115‑1 (MQ=255) aaaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGttt > 2:441583/1‑115 (MQ=255) aaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcag < 2:238545/126‑1 (MQ=255) aaaaGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCAcag > 1:238545/1‑126 (MQ=255) aGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGt < 1:1855422/150‑1 (MQ=255) aGCCAGGGTAAAACCTGGCTTTTTCGTGCCTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGt < 1:2308113/150‑1 (MQ=255) gCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCGTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTg > 2:1643280/1‑150 (MQ=255) gTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 2:64754/150‑1 (MQ=255) tAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg > 2:1517716/1‑97 (MQ=255) tAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 1:1517716/97‑1 (MQ=255) tAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtg > 2:2812140/1‑150 (MQ=255) aaaaCCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgt < 2:2069787/150‑1 (MQ=255) | GAGCGATGACTCTTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCTTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTG‑CGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36025‑36320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |