| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,797,363 | A→C | 5.0% | L198R (CTC→CGC) | gltB ← | L‑glutamate synthase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,797,363 | 0 | A | C | 5.0% | 415.7 / 11.9 | 141 | L198R (CTC→CGC) | gltB | L‑glutamate synthase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base A (67/66); new base C (4/3); total (71/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.08e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
ATGGTGTTGATCTCGCCGTTGTGGGCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGCTCAG > NC_002947/5797216‑5797505 | ggTGTTGATCTCGCCGTTGTGGGCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATc < 2:3025030/150‑1 (MQ=255) gATCTCGCCGTTGTGGGCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACTCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCgg < 1:2599079/150‑1 (MQ=255) ccGTTGTGGGCGAGGAAGCGGAACTGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCatcatc < 1:182189/150‑1 (MQ=255) tgtgGGCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGc < 2:2670871/150‑1 (MQ=255) ggCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCttt > 2:392936/1‑150 (MQ=255) ggCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCttt > 2:297483/1‑150 (MQ=255) ggCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCttt < 1:392936/150‑1 (MQ=255) gCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTg < 1:121950/150‑1 (MQ=255) cGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGt < 1:1099584/150‑1 (MQ=255) gAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGATGGAACAAGCAGATAGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGGCGCGAGATCGCGCGGCCTCATCAGGACTTTGTa > 2:223078/1‑150 (MQ=255) ggAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAga > 1:1107244/1‑150 (MQ=255) cGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGatgatg > 2:1299582/1‑150 (MQ=255) ggAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCttt < 1:1757652/139‑1 (MQ=255) ggAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCttt > 2:1757652/1‑139 (MQ=255) ggAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATgg > 1:3015789/1‑150 (MQ=255) aaCGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTTGAGAAGTGCTGGTGGAACACGCAGATCGCGGTTTGTAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCGTTTGTAGATGATGGTc < 1:1185682/150‑1 (MQ=255) tGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGc < 1:2393510/150‑1 (MQ=255) ccAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGCGATCTCGCGGcgtt < 2:1730581/116‑4 (MQ=255) ccAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGCGATCTCGCGGcgtt > 1:1730581/1‑113 (MQ=255) gCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGc > 1:2545513/1‑150 (MQ=255) gCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGc > 2:2418753/1‑150 (MQ=255) gCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGc > 2:836442/1‑150 (MQ=255) cATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGACACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCtt > 1:957210/1‑134 (MQ=255) aTTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGa > 1:2131463/1‑150 (MQ=255) tttCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGAt > 1:726254/1‑150 (MQ=255) tCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGt < 1:2699430/150‑1 (MQ=255) gCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCtt < 1:1557189/127‑1 (MQ=255) gCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGt < 2:73979/150‑1 (MQ=255) cAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTg < 1:2651180/150‑1 (MQ=255) gtgtTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCGTCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCg < 2:1994674/150‑1 (MQ=255) tgtTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGNGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCAtcatca > 1:1030877/1‑99 (MQ=255) tgtTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCAtcatca < 2:1030877/99‑1 (MQ=255) gtTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGcatcat > 1:754283/1‑96 (MQ=255) gtTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGcatcat < 2:754283/96‑1 (MQ=255) ttGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGcg > 1:816376/1‑150 (MQ=255) tggtggAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGACCCCGTGCGGAATCCGGAAGAGGTGAAATACGAGGTTTTTTTGCGAGAAGCTGCAGATGTAGTGGTCGGcgt < 1:836442/150‑1 (MQ=255) gtggAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGc < 1:596769/87‑1 (MQ=255) gtggAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCAGcgtcg > 2:619230/1‑150 (MQ=255) gagaAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTgg > 1:2998296/1‑150 (MQ=255) gagaAGCGCTGGTGGAAAACGCAGCTCGCGGTTTGCAGGCGCTCGTCACCCATGTCTGGATAAACCGCCGCGAGATCGCGCGCCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTgg < 1:781017/150‑1 (MQ=255) tggtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAgatga > 2:2023983/1‑97 (MQ=255) tggtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAgatga < 1:2023983/97‑1 (MQ=255) tggtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGcc > 1:1765107/1‑150 (MQ=255) gtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTg > 2:446452/1‑138 (MQ=255) gtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTg < 1:446452/138‑1 (MQ=255) gtggAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCGGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCAc > 1:435569/1‑150 (MQ=255) cGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaac < 2:868556/150‑1 (MQ=255) gCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaacg > 1:25243/1‑150 (MQ=255) gCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaacg > 2:572872/1‑150 (MQ=255) aGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAacgac > 1:1578729/1‑150 (MQ=255) aTCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGGCACCGACGAacgacga > 2:1814603/1‑150 (MQ=255) tCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAacgacgac < 2:726254/150‑1 (MQ=255) cgcgGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAacgacgacg < 1:2909921/150‑1 (MQ=255) gTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAgatgat < 2:1666141/77‑1 (MQ=255) gTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAgatgat > 1:1666141/1‑77 (MQ=255) gTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAga < 1:458950/73‑1 (MQ=255) ttGCAGGCGCTCGTCACCCATGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATTGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCTTTGGCCACCGACGAACGACGACTGGCACt < 1:1190079/150‑1 (MQ=255) ttGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACt < 2:25243/150‑1 (MQ=255) aGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGc < 2:819699/116‑1 (MQ=255) aGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGc > 1:819699/1‑116 (MQ=255) aGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAAc < 2:1765107/150‑1 (MQ=255) tCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTg > 2:2708636/1‑150 (MQ=255) gTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAacgac > 1:1587512/1‑128 (MQ=255) gTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAacgac < 2:1587512/128‑1 (MQ=255) gTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGAt > 1:2499650/1‑150 (MQ=255) tCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTg > 1:2134917/1‑104 (MQ=255) tCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTg < 2:2134917/104‑1 (MQ=255) aCCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTgg > 1:2416147/1‑110 (MQ=255) aCCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGTACTGAACAGCTTGATGGc > 1:2230344/1‑150 (MQ=255) aCCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGCCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTgg < 2:2416147/110‑1 (MQ=255) cccAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCg > 1:2126186/1‑150 (MQ=255) cccAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGAAGAACGACGACGGGCACTGAACAGCTTGATGGCg > 1:1866298/1‑150 (MQ=255) ccAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCt < 2:955732/141‑1 (MQ=255) ccAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGa > 2:1505024/1‑150 (MQ=255) aGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAAt < 1:1505024/150‑1 (MQ=255) gTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTc > 1:1268565/1‑150 (MQ=255) tCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTcc < 2:1521725/150‑1 (MQ=255) tGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGTACTGAACAGCTTGATGGCGAATTCCTg < 2:2230344/150‑1 (MQ=255) tGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTg < 1:1032098/150‑1 (MQ=255) gATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTg > 2:1044748/1‑68 (MQ=255) gATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGACTTCCTGGt > 2:210516/1‑150 (MQ=255) gATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGt > 2:1170712/1‑150 (MQ=255) aTAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTc > 1:1019179/1‑150 (MQ=255) atgatgccgcGCGATCTCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTTAACAGCTTGATGGCGAATTCCTGGTCGc > 1:2257773/6‑150 (MQ=255) aaaaCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGc > 2:460889/1‑150 (MQ=255) aaCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaac > 1:849207/1‑106 (MQ=255) aaCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACgg < 2:2739379/114‑1 (MQ=255) aaCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACgg > 1:2739379/1‑114 (MQ=255) aaCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGCTc > 1:1990407/1‑150 (MQ=255) atgccgcGCGATCTCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaacga < 1:1434369/105‑1 (MQ=255) atgccgcGCGATCTCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaacga > 2:1434369/3‑107 (MQ=255) aCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACcg < 2:622833/99‑1 (MQ=255) aCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACcg > 1:622833/1‑99 (MQ=255) aCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGa < 1:1379114/129‑1 (MQ=255) aCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGa > 2:1379114/1‑129 (MQ=255) aCGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGCTCa < 1:317643/150‑1 (MQ=255) tgccgcGCGATCTCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGacgaacga > 1:1702520/2‑106 (MQ=255) cgccgcGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGCTCAg < 2:1019179/150‑1 (MQ=255) cgcgAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTg > 2:2586606/1‑88 (MQ=255) gcgAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTc > 2:410132/1‑71 (MQ=255) | ATGGTGTTGATCTCGCCGTTGTGGGCGAGGAAGCGGAACGGCTGCGCCAGCGGCCATTTCGGCAGGGTGTTGGTGGAGAAGCGCTGGTGGAACACGCAGATCGCGGTTTGCAGGCGCTCGTCACCCAGGTCTGGATAAAACGCCGCGAGATCGCGCGGCATCATCAGGCCTTTGTAGATGATGGTCTTGTGCGAGAAGCTGCAGATGTAGTGGTCGGCGTCGTGGGCGTTGGCCACCGACGAACGACGACGGGCACTGAACAGCTTGATGGCGAATTCCTGGTCGCTCAG > NC_002947/5797216‑5797505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |