| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,020,607 | G→A | 5.7% | P33L (CCG→CTG) | dadA‑II ← | D‑amino acid:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,020,607 | 0 | G | A | 5.7% | 311.3 / 4.8 | 105 | P33L (CCG→CTG) | dadA‑II | D‑amino acid:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (46/53); new base A (3/3); total (49/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
ATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATGGCAT > NC_002947/6020459‑6020754 | aTCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCgg > 2:3019297/1‑150 (MQ=255)aTCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCAACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCgg > 1:1304570/1‑150 (MQ=255) gCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTg > 1:405160/1‑150 (MQ=255) cccGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTgg > 1:2872746/1‑150 (MQ=255) ccGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGc > 2:2658059/1‑150 (MQ=255) cGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCg > 1:73765/1‑150 (MQ=255) gTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCgg < 1:3019297/150‑1 (MQ=255) gCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtg < 1:622852/148‑2 (MQ=255) gCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtg > 2:622852/1‑147 (MQ=255) gCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTg > 2:476221/1‑150 (MQ=255) ccAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGa > 1:3039992/1‑150 (MQ=255) cAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGAc > 1:2312879/1‑150 (MQ=255) gggtgCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATCGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc < 1:979482/150‑1 (MQ=255) gggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGAGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTc < 2:2250603/150‑1 (MQ=255) ggggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCg > 1:1123074/1‑150 (MQ=255) ggCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGaa > 2:597632/1‑150 (MQ=255) gTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAAcc > 1:876581/1‑150 (MQ=255) tGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCt < 2:3039992/150‑1 (MQ=255) tGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCt > 2:72732/1‑150 (MQ=255) cGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGc < 1:2658059/150‑1 (MQ=255) gCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGcc > 1:767801/1‑150 (MQ=255) gCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGcc > 1:738866/1‑150 (MQ=255) tCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCt > 1:780481/1‑115 (MQ=255) tCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCt < 2:780481/115‑1 (MQ=255) agcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAgg < 2:2863582/150‑1 (MQ=255) agcCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACAGTGACTTCGAAACCTTGCCGGGCCAgg < 2:1497979/150‑1 (MQ=255) ttGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGtagtag < 1:789206/150‑1 (MQ=255) tGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAgg < 2:405160/150‑1 (MQ=255) gATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgta < 2:889735/144‑1 (MQ=255) gATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGgta > 1:889735/1‑144 (MQ=255) tGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTGGTAGGCAc > 1:497074/1‑150 (MQ=255) gCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTg < 2:275438/150‑1 (MQ=255) tttGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGc > 2:431615/1‑150 (MQ=255) tttGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtgg < 2:2351599/103‑3 (MQ=255) tttGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtgg > 1:2351599/1‑101 (MQ=255) tGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCgg < 2:470458/150‑1 (MQ=255) aGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAg > 1:1475151/1‑131 (MQ=255) aGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAg < 2:1475151/131‑1 (MQ=255) gCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTc < 2:2310535/150‑1 (MQ=255) ggTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCg < 1:431615/150‑1 (MQ=255) gTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa < 2:2773588/150‑1 (MQ=255) tACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGAt < 2:521198/150‑1 (MQ=255) cGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTa < 2:497074/150‑1 (MQ=255) gCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTac > 2:801862/1‑150 (MQ=255) cAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac > 2:924751/1‑150 (MQ=255) cAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTacac < 1:72732/150‑1 (MQ=255) cAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa < 1:2169449/133‑1 (MQ=255) cAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa > 2:2169449/1‑133 (MQ=255) gggCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTAcagcgtac < 2:767801/150‑8 (MQ=255) gCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCa < 1:476221/150‑1 (MQ=255) cGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAg < 1:924751/150‑1 (MQ=255) gAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGTCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCa < 1:654529/148‑1 (MQ=255) gAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGTCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCa > 2:654529/1‑148 (MQ=255) gCATAGCCGGGCGATATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATTGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTa < 1:2831424/127‑1 (MQ=255) gCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTa > 2:2831424/1‑127 (MQ=255) gCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACt > 1:2872880/1‑150 (MQ=255) tAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCAGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGc < 2:1123074/150‑1 (MQ=255) agtcGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCa < 2:1242953/147‑1 (MQ=255) gCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGGGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCAt < 2:876581/150‑1 (MQ=255) gCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtggc < 1:1176787/65‑4 (MQ=38) gCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCAGCCGGCGGtggc > 2:1176787/1‑62 (MQ=255) ccGGGCGAGATCTGGCCGGCGTTGGAAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATc < 2:2655854/150‑1 (MQ=255) gggCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGc < 1:1282991/125‑1 (MQ=255) gggCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGc > 2:1282991/1‑125 (MQ=255) ggCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtt < 2:2872880/150‑1 (MQ=255) cGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtttt > 2:198677/1‑150 (MQ=255) agaTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTAt < 1:1776959/150‑1 (MQ=255) aTCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATcc > 2:2262093/1‑150 (MQ=255) cTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCt > 2:2017262/1‑150 (MQ=255) cTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCt < 2:738866/150‑1 (MQ=255) cTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCt < 2:1086081/150‑1 (MQ=255) ggCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTca < 1:597632/150‑1 (MQ=255) ccGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTcaca < 1:1642657/150‑1 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAg > 1:258496/1‑79 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAg < 2:258496/79‑1 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTa < 2:539512/120‑1 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTa > 1:539512/1‑120 (MQ=255) cGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCacac > 1:2827310/1‑150 (MQ=255) ggCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGgcgc < 1:2467119/150‑1 (MQ=255) gCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGcc < 2:2313563/64‑1 (MQ=255) cAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGgcgcgc < 2:1496623/150‑1 (MQ=255) aaaGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa > 2:1731466/1‑92 (MQ=255) aaaGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGa < 1:1731466/92‑1 (MQ=255) aaaGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACAcgcg > 1:755190/1‑143 (MQ=255) aaaGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACAcgcg < 2:755190/143‑1 (MQ=255) aaGCTGGTTTCCATGGCCACCGCCGGCGGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGcgccg < 2:528831/150‑1 (MQ=255) gCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGca > 1:2880829/1‑150 (MQ=255) gCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGca < 2:73765/150‑1 (MQ=255) tGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGcaca < 1:801862/150‑1 (MQ=255) ggTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCacac > 2:2116960/1‑150 (MQ=255) gTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACt > 1:2895370/1‑150 (MQ=255) ccATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTa > 1:289587/1‑150 (MQ=255) ccATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTa > 1:1287365/1‑150 (MQ=255) cATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGAATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAt > 2:1994501/1‑150 (MQ=255) aTGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAtt < 2:2312879/150‑1 (MQ=255) aTGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTAtt > 1:621952/1‑150 (MQ=255) tGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGtttt < 1:999727/115‑1 (MQ=255) cACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAAt < 2:2880829/150‑1 (MQ=255) gccgGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATGGCa < 2:621952/150‑1 (MQ=255) ccgGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATGGCAt > 1:1508820/1‑150 (MQ=255) | ATCGCCCGTGAGCTTGATGGCCAGGGGGGCGTGACGCTCCAGCAGCCACTTGATGGCTTTGAGCGGTACGCCAGGCGCAGCCCAGGGCGAGGCATAGCCGGGCGAGATCTGGCCGGCGTTGGCAAAGCTGGTTTCCATGGCCACCGCCGGCTGGCGGTCGACCACCGTGACTTCGAAACCTTGCCGGGCCAGGTAGTAGGCACTGGCGGTTCCGATTACACCGCTACCAAGTACCAGAACTCGCATCGTTTTATCCCTCACACGCGGCGCGCCGCACACTTTTATTGAAATGGCAT > NC_002947/6020459‑6020754 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |