| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,127,218 | C→G | 8.1% | V241V (GTG→GTC) ‡ | PP_5375 ← | LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,127,218 | 0 | C | G | 8.1% | 426.3 / 23.2 | 136 | V241V (GTG→GTC) ‡ | PP_5375 | LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (59/66); new base G (5/6); total (64/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
CGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAAGCCAGAGCC > NC_002947/6127069‑6127366 | cGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGcc > 2:2289608/1‑150 (MQ=255) ggAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCa < 1:1252058/150‑1 (MQ=255) aCAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGc < 2:2615202/150‑1 (MQ=255) gCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCTACCAGGTTGCCCCAGGCCAGGGCCACGCCCt < 2:1889714/150‑1 (MQ=255) aCGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCa < 1:2289608/150‑1 (MQ=255) cgatctCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCCACCAGCGCGAGGCCAGGGCCACGCCCTGGCCAc < 1:1617044/145‑1 (MQ=255) gCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACt > 1:2675403/1‑150 (MQ=255) gCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACt > 2:2584829/1‑150 (MQ=255) tttCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑Ga > 2:2235314/1‑150 (MQ=255) ttCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GAt < 1:1214344/150‑1 (MQ=255) aCGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTGGCTTTGTCGGGCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACTAGATCg > 2:1617044/1‑150 (MQ=255) gAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCg > 2:1327365/1‑150 (MQ=255) aGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGa < 1:2155320/150‑1 (MQ=255) ggACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGAc < 2:397821/150‑1 (MQ=255) gACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACt > 2:2929144/1‑150 (MQ=255) aCGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTG‑CCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATc > 1:612311/1‑150 (MQ=255) cGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATTGCCGACTGGATc < 1:870628/150‑1 (MQ=255) tCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCAc < 2:922859/119‑1 (MQ=255) tCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCAc > 1:922859/1‑119 (MQ=255) tCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGc > 2:1555328/1‑137 (MQ=255) cGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCa < 1:2929144/150‑1 (MQ=255) gTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGTGGCCCTGGcctggg < 1:276355/129‑5 (MQ=255) ggACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATAcc < 1:2267642/150‑1 (MQ=255) gacgacTCCAGCAGGTAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCg > 1:2898086/1‑150 (MQ=255) acgacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGt > 1:1239649/1‑150 (MQ=255) cgacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTa < 2:2675403/150‑1 (MQ=255) cgacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCACAGCGTAGCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTa < 1:205749/150‑1 (MQ=255) gacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCt < 2:1054500/115‑1 (MQ=255) gacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCt > 1:1054500/1‑115 (MQ=255) gacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAg < 1:2235314/150‑1 (MQ=255) gacTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGGACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAg > 1:2445165/1‑150 (MQ=255) gacTCCAGCAGGCAGAACTTGGCGTCGGCCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTCGCCCCACGCCAGGGCCACGCCCTGGCCACC‑GCTCGCCGACTGCATCAGCATACCGtcg > 2:1464516/1‑148 (MQ=255) cTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCt > 1:1175048/1‑150 (MQ=255) tCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGTCACGCCCt > 2:21402/1‑112 (MQ=255) tCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGTGGCCCTGGcctggg > 2:1958015/1‑116 (MQ=255) tCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGTGGCCCTGGcctggg < 1:1958015/120‑5 (MQ=255) tCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGACACT‑GATCGCCGACTGGATCAGCATACCGTAGCTg > 1:2635148/1‑150 (MQ=255) cagcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGtt > 1:258501/1‑150 (MQ=255) agcagGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGAACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTg > 2:2572694/1‑150 (MQ=255) gcaggaagAACTTGGCGTCGGTCTGGAGTACAAGATCGTTGGGCTTGACCAGCGAACAGGTGCTCAACGCATCGTCCACCAGGTTGCGCAAGGCCAGGGACACGCCGTGGACATT‑GATCGCGGAGTGGAGCAGGATACCGTAGTTGTTGa > 1:321362/1‑150 (MQ=255) caggcagAACTTTGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCa < 2:792044/112‑1 (MQ=255) caggcagAACTTTGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCa > 1:792044/1‑112 (MQ=255) caggcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGat < 1:840498/150‑1 (MQ=255) caggcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAAAGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCCGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTATTGat > 1:947588/1‑150 (MQ=255) gcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGa < 2:2366196/125‑1 (MQ=255) gcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATa > 2:2503970/1‑133 (MQ=255) gcagAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATAtt > 2:802418/1‑150 (MQ=255) ttGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGcc > 2:3053470/1‑111 (MQ=255) ttGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACt < 2:87083/115‑1 (MQ=255) gTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCtt > 1:1993411/1‑150 (MQ=255) tCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTg < 2:1811038/150‑1 (MQ=255) gTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTgggg < 2:359292/150‑1 (MQ=255) gTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTgggg < 2:1379896/150‑1 (MQ=255) tGGAGTACCACATCGTTAGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTc < 1:2370003/150‑1 (MQ=255) gTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTggg < 1:1585654/142‑1 (MQ=255) gTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTggg > 2:1585654/1‑142 (MQ=255) gTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATgg > 1:154123/1‑150 (MQ=255) tACCACATCGCTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGCTAGCTACTTGTAAAGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATNAGCATACCGNAGCTGTTGATATTGACGCGATGCTTGGGGGTCATggg < 1:1464516/150‑1 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGTGGCCCTGGcctg < 2:1150311/83‑3 (MQ=38) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCGTGGCCCTGGcctg > 1:1150311/1‑81 (MQ=38) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATa < 1:2506836/106‑1 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATa > 2:2506836/1‑106 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGAt > 1:1645096/1‑131 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCAt < 1:1918894/144‑1 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCAt > 2:1918894/1‑144 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTc < 1:1758395/150‑1 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTc > 1:288669/1‑150 (MQ=255) cacaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTc > 2:2210208/1‑150 (MQ=255) acaTCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCg > 1:2622452/1‑150 (MQ=255) gCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGgc > 1:525121/1‑150 (MQ=255) gACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGgc > 2:1243308/1‑146 (MQ=255) ccAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGa < 2:1205985/76‑1 (MQ=255) ccAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGa > 1:1205985/1‑76 (MQ=255) cGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATcc < 2:2321502/130‑1 (MQ=255) cGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATcc > 1:2321502/1‑130 (MQ=255) cGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCgg < 2:2890584/150‑1 (MQ=255) cTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCaa > 1:2665797/1‑150 (MQ=255) cTCAACGCATCGTCCACCAGGTTG‑CCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAAc < 2:612311/150‑1 (MQ=255) cATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTAccc < 2:1175048/150‑1 (MQ=255) tCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAg > 1:2783569/1‑150 (MQ=255) gTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCGACCTAc > 2:2755171/1‑144 (MQ=255) caGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCAtt < 1:1080526/125‑1 (MQ=255) agggggCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTgg < 2:2635148/145‑1 (MQ=255) ggTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCt > 1:662021/1‑99 (MQ=255) ggTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCt < 2:662021/99‑1 (MQ=255) gTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGa < 2:1993411/150‑1 (MQ=255) tGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGt < 2:2622452/150‑1 (MQ=255) gatcagtggccaggGCGTGGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGa > 2:2770240/8‑148 (MQ=255) gatcagtggccaggGCGTGGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGa < 1:2770240/141‑1 (MQ=255) gCCCCAGTCCAGGGCCACGCCCTGGCCACT‑CATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTc < 2:1514593/150‑1 (MQ=255) gCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTc < 2:1222821/150‑1 (MQ=255) cccAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTTATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTAcc > 1:1912377/1‑131 (MQ=255) cccAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATg > 1:2548147/1‑89 (MQ=255) cccAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTAcc < 2:1912377/131‑1 (MQ=255) cccAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCtt > 1:176552/1‑150 (MQ=255) gccaggGCGTGGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAAc < 2:2869014/121‑1 (MQ=255) gccaggGCGTGGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAAc > 1:2869014/1‑121 (MQ=255) gccaggGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAagc > 2:721062/1‑150 (MQ=255) gccaggGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACAATTCGGGCCAACCTACCCAGTCGCGCTGGGGGTGTTCAcgc > 1:1296470/1‑150 (MQ=255) ccACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAagccagagcc > 1:1034640/1‑150 (MQ=255) | CGGAACAGCCGCACGCTTTCACGAGGACCACGCTCGGTGGACGACTCCAGCAGGCAGAACTTGGCGTCGGTCTGGAGTACCACATCGTTGGGCTTGACCAGCGCACCGGTGCTCAACGCATCGTCCACCAGGTTGCCCCAGGCCAGGGCCACGCCCTGGCCACT‑GATCGCCGACTGGATCAGCATACCGTAGCTGTTGATATTGACGCGATGCTTGGGGGTCATGGGCTCGTATCCCAGGCGCTTGAACCATTCGGGCCAACCTACCCAGTCGCGCTGGGAGTCTTCAAGCCAGAGCC > NC_002947/6127069‑6127366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |