Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 550,760 | G→C | 38.3% | G33R (GGT→CGT) | rpsJ → | 30S ribosomal protein S10 |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 550,760 | 0 | G | C | 38.3% | 62.0 / 117.7 | 95 | G33R (GGT→CGT) | rpsJ | 30S ribosomal protein S10 |
Reads supporting (aligned to +/- strand): ref base G (28/30); new base C (22/14); total (51/44) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.89e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.71e-02 |
Only 100 of 101 total aligned reads displayed.
TTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGTTCTGGACATCGTCCAGCCAACGGATA > NC_002947/550613‑550907 | ttttAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGt > 2:1916727/1‑150 (MQ=255) gCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAACTATACCATTCCGTATAAGGAGAAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGcaca > 1:2677590/1‑150 (MQ=255) gCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCCACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGcaca > 1:2489925/1‑150 (MQ=255) ggCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGt < 2:2915896/150‑1 (MQ=255) tAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGt < 1:1889201/150‑1 (MQ=255) aGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTg < 2:476304/150‑1 (MQ=255) aGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTg < 2:1443500/150‑1 (MQ=255) gTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTgg < 2:2489925/150‑1 (MQ=255) gTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAATTGCGTgg < 2:2282823/150‑1 (MQ=255) gTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTgg > 1:2282823/1‑150 (MQ=255) gCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTc > 2:1444976/1‑150 (MQ=255) gCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTc < 1:1942736/150‑1 (MQ=255) tGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCa < 2:574058/150‑1 (MQ=255) ggAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg > 2:126376/1‑122 (MQ=255) ggAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg < 1:126376/122‑1 (MQ=255) gAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTg < 2:590733/150‑1 (MQ=255) gAACAGCCTGGAGTCTGAAATCCAATGAAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCAAAAGTGCGTGGTCAAAATCAACTg > 1:1403673/1‑150 (MQ=255) aaCAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGc < 1:90674/150‑1 (MQ=255) aCAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCACTTACACTGcc > 1:636712/1‑150 (MQ=255) aGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTa > 1:2355305/1‑150 (MQ=255) cTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTAccc < 1:1612261/150‑1 (MQ=255) gAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCa > 1:2505561/1‑150 (MQ=255) gtacgAAAGCAAATGCAAAATCAGCAAATCCGTATAAGGTTGAAGGCTATCGACCATCACCTGATCGACCAATCCACCCAGCAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCaaa < 1:761184/146‑1 (MQ=255) tCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg > 1:1508648/1‑108 (MQ=255) tCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg < 2:1508648/108‑1 (MQ=255) cTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAaga < 2:2505561/150‑1 (MQ=255) tGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg < 1:1374083/106‑1 (MQ=255) tGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTg > 2:1374083/1‑106 (MQ=255) tGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAagag > 1:452207/1‑150 (MQ=255) gAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGc > 1:174034/1‑150 (MQ=255) aaaTCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCg > 2:1081521/1‑150 (MQ=255) aaTCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGt < 1:1916727/150‑1 (MQ=255) aTCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGtt < 2:1075736/150‑1 (MQ=255) aTCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGtt < 2:2461599/150‑1 (MQ=255) cAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCa > 2:555231/1‑150 (MQ=255) aaTGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCAc > 1:1120206/1‑150 (MQ=255) tGCACAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCg > 2:1404290/1‑150 (MQ=255) tGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCg > 1:2027883/1‑150 (MQ=255) tGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACACAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCg > 1:507069/1‑150 (MQ=255) gCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTa < 1:156483/128‑1 (MQ=255) gCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTa > 2:156483/1‑128 (MQ=255) aaaTCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTCCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCt > 1:2250554/1‑150 (MQ=255) aaaTCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCt < 2:2885121/150‑1 (MQ=255) ccGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCa < 2:1120206/150‑1 (MQ=255) tCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGt < 1:1124257/136‑1 (MQ=255) tCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGt > 2:1124257/1‑136 (MQ=255) tCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTca > 2:2674119/1‑150 (MQ=255) gTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTcaacaa < 2:1835015/150‑1 (MQ=255) gTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGCTCTGGTCTcccc < 2:1721338/138‑1 (MQ=255) gTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGAGTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTcccc > 1:1721338/1‑138 (MQ=255) gTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTc < 1:875943/145‑1 (MQ=255) gTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTc > 2:875943/1‑145 (MQ=255) gAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGTTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGa > 2:634991/1‑150 (MQ=255) gAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGCGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGtctc < 1:2311894/132‑1 (MQ=255) gAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGCGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGtctc > 2:2311894/1‑132 (MQ=255) gAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGa > 2:2225730/1‑150 (MQ=255) aGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGAcg > 2:251747/1‑150 (MQ=255) gCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGAcgcg < 1:555231/150‑1 (MQ=255) tttCGACCATCGCCTGATCTACCAATCCACCCAGGAAATCGTGGAGACCTCGAAACGTACTGGTGCACAAGTGCGGGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGAcgcgcg > 1:2577068/1‑150 (MQ=255) tttCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGAcgcgcg > 1:320000/1‑150 (MQ=255) tttCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTcaaca < 1:974377/140‑1 (MQ=255) gACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCg > 2:1588025/1‑104 (MQ=255) gACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCg < 1:1588025/104‑1 (MQ=255) gACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCAACTCCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGAc > 2:2398320/1‑150 (MQ=255) aCCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCATGAcc < 2:2355305/150‑1 (MQ=255) gCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCACCAAAGACGCGCGTGACCACTAca > 2:698964/1‑149 (MQ=255) tGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACgaga > 2:904278/1‑150 (MQ=255) tGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACgaga < 2:2677590/150‑1 (MQ=255) tGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACgaga > 1:2776574/1‑150 (MQ=255) ccaTCCACCAATCCACCCAGGAAATCTTAGAAACCCCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTTCACCGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACgaga < 1:1451364/148‑1 (MQ=255) aTCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGAtt > 2:3068241/1‑150 (MQ=255) tCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTc > 1:2914067/1‑150 (MQ=255) tCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTc < 2:1749053/150‑1 (MQ=255) tCGAACAATCCACACAGGAAAGCTTGGAAACCGCGAAACGTACTTGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTc > 2:967553/1‑150 (MQ=255) aCCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGt > 1:2839969/1‑131 (MQ=255) aCCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGt < 2:2839969/131‑1 (MQ=255) aCCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCa > 2:1180917/1‑150 (MQ=255) aCCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCa > 1:1634619/1‑150 (MQ=255) cAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACt > 1:89212/1‑150 (MQ=255) cACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATaa > 1:1258645/1‑150 (MQ=255) aCCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAg > 1:2862427/1‑150 (MQ=255) cccAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGc > 1:672714/1‑150 (MQ=255) ccAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGtt > 1:3047719/1‑80 (MQ=255) ccAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGtt < 2:3047719/80‑1 (MQ=255) ccAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTAACCGTTCTGGTCTCCCCGCACGTCAACAAAGACACGCGTGACCAGTACGAGATTCGCAc < 2:678480/141‑1 (MQ=255) ccAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTAACCGTTCTGGTCTCCCCGCACGTCAACAAAGACACGCGTGACCAGTACGAGATTCGCAc > 1:678480/1‑141 (MQ=255) cAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCgt < 1:3068241/150‑1 (MQ=255) aGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCgtg < 1:1180917/150‑1 (MQ=255) aGGAAATCGTGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCgtg > 1:2812187/1‑150 (MQ=255) gAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGtt < 2:452207/150‑1 (MQ=255) aTCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCACAGCGAGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGTTCTg < 1:2674119/150‑1 (MQ=255) tGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGc < 2:2086829/66‑1 (MQ=255) tGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGc > 1:2086829/1‑66 (MQ=255) tGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGTTCTGGACa < 2:2914067/150‑1 (MQ=255) tGGAAACCGCGAAACGTACTCGTGCACAAGTGCGTAGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAGGCGTGTTCTGGACa > 1:578043/1‑150 (MQ=255) ggAAACCGCGAAACGTACTCGTGCACAAGTGCGTAGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAGGCGTGTTCTGGACAt < 2:578043/150‑1 (MQ=255) gcgAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATaa > 2:2773612/1‑128 (MQ=255) gcgAAACGTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATaa < 1:2773612/128‑1 (MQ=255) gTACTCGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGTTCTGGACATCGTCCAGCCAACgg < 1:1081521/150‑1 (MQ=255) cTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTATTCTGGACTCCGTTTAGCTAACGGATa < 2:2577068/150‑1 (MQ=255) | TTTTAGCGGGCGTAGTGCGTCCGTTGGGAACAGCCTGGAGTCTGAAATCCAATGCAAAATCAGCAAATCCGTATCAGGTTGAAGGCTTTCGACCATCGCCTGATCGACCAATCCACCCAGGAAATCGTGGAAACCGCGAAACGTACTGGTGCACAAGTGCGTGGTCCAATTCCACTGCCTACCCGCAAAGAGCGTTTCACCGTTCTGGTCTCCCCGCACGTCAACAAAGACGCGCGTGACCAGTACGAGATTCGCACTCATAAGCGTGTTCTGGACATCGTCCAGCCAACGGATA > NC_002947/550613‑550907 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |