| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 571,621 | T→C | 12.2% | intergenic (+44/+47) | ssb → / ← PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 571,621 | 0 | T | C | 12.2% | 345.1 / 30.6 | 133 | intergenic (+44/+47) | ssb/PP_0486 | single‑stranded DNA‑binding protein/GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (61/55); new base C (7/9); total (69/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.18e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
CAGGCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGCACA > NC_002947/571473‑571770 | gCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGcc > 1:1070521/1‑150 (MQ=255) ccAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCt > 1:592841/1‑150 (MQ=255) ccAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCt > 2:1186261/1‑150 (MQ=255) ccAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCt > 2:1661922/1‑150 (MQ=255) ccAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCt < 2:18812/150‑1 (MQ=255) ccAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCt > 2:2166389/1‑150 (MQ=255) cAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTg < 2:1774648/150‑1 (MQ=255) cAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CACGGCAACTGCCCTg < 1:1472628/150‑1 (MQ=255) aGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTgg < 2:1386414/150‑1 (MQ=255) aGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAACTGCCCTgg < 2:691942/150‑1 (MQ=255) gcgcCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCgggg > 2:424351/1‑150 (MQ=255) gcgcCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTggg < 1:847929/150‑1 (MQ=255) gcgcCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAACTGCCCTggg < 2:389522/150‑1 (MQ=255) gcCCGCAACAGGCCCTTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCTGCTGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGtt < 2:2860170/150‑1 (MQ=255) ccGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGTTATTCCGTTCTGATCAGAGCGGTAGAGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGtttt > 1:2495191/1‑150 (MQ=255) ccGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTGCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGtttt > 1:2495032/1‑150 (MQ=255) ccGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGtttt > 1:1576217/1‑150 (MQ=255) ccGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGCCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGtttt > 2:1517613/1‑150 (MQ=255) tctaaCAGCCCCCTCAGCGCCCAGCGCCGCAACAGCCGGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCTGAGCGGCAGGGCGTTTAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGttttt < 1:1010526/147‑1 (MQ=255) cGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGttttt < 2:2484924/150‑1 (MQ=255) cGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGttttt < 2:1070521/150‑1 (MQ=255) cAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGttttttt < 1:1731962/150‑1 (MQ=255) aCAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTAt < 2:2587946/150‑1 (MQ=255) aCAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAAAC‑CAGGGCAGTTGCCCTGGGgtttttata > 2:1010526/1‑147 (MQ=255) aGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg < 1:233996/149‑1 (MQ=255) aGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg > 2:233996/1‑149 (MQ=255) gCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGgc > 2:2023328/1‑150 (MQ=255) ccccTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGgca > 1:2129767/1‑150 (MQ=255) cTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGgcagca > 1:1467768/1‑150 (MQ=255) tCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATggg < 2:1528314/144‑1 (MQ=255) agcgcccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CTGGGCAGTTGCCCt < 1:2366301/127‑1 (MQ=255) agcgcccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CTGGGCAGTTGCCCt > 2:2366301/1‑127 (MQ=255) gcgcccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACcgc < 2:1131505/150‑1 (MQ=255) gcgcccagcgccGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACcgc < 1:1517613/150‑1 (MQ=255) gCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGCTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTc < 2:1246988/150‑1 (MQ=255) ccTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCa < 2:252966/150‑1 (MQ=255) ccTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCa < 1:1790453/150‑1 (MQ=255) gccgcAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTggg < 1:1204213/105‑1 (MQ=255) cgcAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGaac > 2:2928309/1‑150 (MQ=255) ccGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCg > 2:2390202/1‑150 (MQ=255) acggcggCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTa < 1:2217668/105‑1 (MQ=255) gcggcTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCgggg < 1:1186261/150‑1 (MQ=255) tGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCGGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCg > 2:1991938/1‑150 (MQ=255) aCTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg < 1:2892488/98‑1 (MQ=255) aCTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg > 2:2892488/1‑98 (MQ=255) aCTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAg < 2:627797/116‑1 (MQ=255) aCTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGc < 2:2179845/150‑1 (MQ=255) aCTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGc > 2:685309/1‑150 (MQ=255) cTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGgcag < 2:2000648/102‑1 (MQ=255) cTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGgcag > 1:2000648/1‑102 (MQ=255) ttCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCACTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGa > 1:905071/1‑150 (MQ=255) cGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAAt < 1:1661922/150‑1 (MQ=255) gACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCATGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCTGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATc < 1:2928309/150‑1 (MQ=255) cAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCca > 2:2874283/1‑150 (MQ=255) gCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAACTGCCCTGGGtttctgg < 2:1176262/86‑5 (MQ=37) gATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCgg > 1:1348248/1‑127 (MQ=255) gATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGCATACAGCAGCCt > 2:1107599/1‑150 (MQ=255) aTGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAACTGCCCTGGGtttct < 1:1241690/78‑3 (MQ=38) aTGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAACTGCCCTGGGtttct > 2:1241690/1‑76 (MQ=38) cGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg > 1:2319541/1‑79 (MQ=255) cGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATg < 2:2319541/79‑1 (MQ=255) tatTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCt > 2:1917223/1‑150 (MQ=255) tCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGt < 1:2352476/64‑1 (MQ=255) gTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCa > 1:386788/1‑150 (MQ=255) ttCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAg > 1:288717/1‑150 (MQ=255) tGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGc > 2:1992287/1‑150 (MQ=255) tGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGc < 1:2874283/150‑1 (MQ=255) aTCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCgggg > 1:1097219/1‑109 (MQ=255) aTCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCaa > 1:709338/1‑150 (MQ=255) tCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCaaa < 2:2495032/150‑1 (MQ=255) gCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCa < 1:685309/150‑1 (MQ=255) gggCGTTCAGCAAGACCAGAAACCTCTTGGC‑GAGGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCtt > 1:2384852/1‑150 (MQ=255) ggCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTg < 2:2347221/150‑1 (MQ=255) gCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTgg > 1:731947/1‑150 (MQ=255) gCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTgg < 2:1467768/150‑1 (MQ=255) ttCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGAGGCTCCGGCGAATCCAGCAGGCTTGCTAGCTTGGTCAGGGCAAAGCCCAGTTCTTggcgg > 2:1114780/1‑150 (MQ=255) gCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGCTCCTCCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTAAGGCCTATGCCGTGTTCTGGTCGGCTgg > 1:2971798/1‑150 (MQ=255) gCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTgg > 2:2073153/1‑150 (MQ=255) gCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTgg < 1:2023328/150‑1 (MQ=255) cAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAgg > 2:904499/1‑124 (MQ=255) cAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCt > 2:1703245/1‑139 (MQ=255) gACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGc < 2:2416718/150‑1 (MQ=255) taaaaaaaCC‑CAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCa > 2:1275798/6‑130 (MQ=255) taaaaaaaCC‑CAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCtt < 2:2707543/131‑1 (MQ=255) taaaaaaaCC‑CAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCtt > 1:2707543/6‑136 (MQ=255) cAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGc > 1:1357119/1‑147 (MQ=255) cAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGc < 2:1357119/147‑1 (MQ=255) cAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCAt > 1:1584569/1‑150 (MQ=255) aaaCC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGAAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAg > 1:412377/1‑150 (MQ=255) aaaCC‑CAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAg > 1:2656552/1‑126 (MQ=255) cc‑cAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc > 2:2715276/1‑150 (MQ=255) cc‑cAGGGCAACTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGc > 1:2706646/1‑150 (MQ=255) cAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGa < 2:2911949/150‑1 (MQ=255) aGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGca < 2:2606525/150‑1 (MQ=255) gTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCtt > 1:84998/1‑96 (MQ=255) gTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCtt < 2:84998/96‑1 (MQ=255) ttGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGcaca > 1:2186105/1‑150 (MQ=255) ttGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGcaca > 1:2185889/1‑150 (MQ=255) ttGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGcaca > 2:203651/1‑150 (MQ=255) ttGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGcaca > 2:2764764/1‑150 (MQ=255) | CAGGCCCAGCGCCCGCAACAGGCCCCTCAGCGCCCAGCGCCGCAACAGCCTGCGCCGCAGCCGGCGGCTGACTTCGACAGCTTCGATGACGATATTCCGTTCTGATCAGAGCGGTAGGGCGTTCAGCAAGACCAGAAACC‑CAGGGCAGTTGCCCTGGGTTTTTTTATGGGCAGCACCGCGTATCAGGCATCGCTTTCAGTAGAACAACCGGGGCTCCGGCGAATCCAGCAGGCTTGCCAGCTTGGTCAGGGCAAAGCCCAGTTCTTGGCGGCTGGGTGCCATCAGGGCGATGCGCACA > NC_002947/571473‑571770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |