| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 587,079 | C→G | 6.0% | P43R (CCG→CGG) | PP_0497 → | Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 587,079 | 0 | C | G | 6.0% | 426.2 / 14.7 | 133 | P43R (CCG→CGG) | PP_0497 | Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (69/56); new base G (5/3); total (74/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.73e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
GCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586932‑587228 | gcgTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGa > 1:1613047/1‑150 (MQ=255) aCCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCt > 1:2841997/1‑150 (MQ=255) aCCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCt < 1:305290/150‑1 (MQ=255) cTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCttt > 1:1246021/1‑150 (MQ=255) cTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTATCGATCATCCGTGCACAGTTCAACGAGTACCTGAGCGGGCAAAGCCGTCCGACGGCttt < 1:839871/150‑1 (MQ=255) cTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCAAGCTATCGACCCACAGCGCGCCCCTGATGCAGAGCCGGAGCAGGCAAAGCGGTCCGACGGCctt > 2:2336718/1‑150 (MQ=255) cTGGATTCCGCATATGAGCGATCACTTCCCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCttt > 2:1030272/1‑150 (MQ=255) gATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCtttgcc < 2:1246021/150‑4 (MQ=255) aTTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 2:1563482/150‑1 (MQ=255) ttCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAcc > 1:2080268/1‑150 (MQ=255) tatGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCg > 1:1776701/1‑150 (MQ=255) gAGCGATCACTTCGCTACAAACCTCAAACTTACCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TAt > 2:1895630/1‑150 (MQ=255) gCGACCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGccgtcgg > 2:18521/1‑144 (MQ=255) aTCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAcc < 2:1685542/135‑1 (MQ=255) aTCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAcc > 1:1685542/1‑135 (MQ=255) aTCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCg > 1:1927135/1‑150 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTATCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGActtc > 1:139718/1‑150 (MQ=255) ttCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGActtc > 2:2601820/1‑150 (MQ=255) ccTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACttcttc < 1:1030272/149‑1 (MQ=255) cTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTTCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCg > 2:2211329/1‑150 (MQ=255) aCAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTTCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGgt < 1:2211329/150‑1 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCtttg < 1:592348/114‑2 (MQ=255) cTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAg > 1:463878/1‑150 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAg < 1:1494690/149‑1 (MQ=255) tCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAg > 2:1494690/1‑149 (MQ=255) aCTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCaa < 1:2867348/111‑1 (MQ=255) aCTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTa > 1:2165057/1‑150 (MQ=255) tcTGCAGTCACTCCCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAAc < 2:561202/149‑1 (MQ=255) cTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc > 2:641300/1‑106 (MQ=255) cTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAc < 1:641300/106‑1 (MQ=255) tGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCgg > 1:1721960/1‑131 (MQ=255) tGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCAACCACCAGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACta > 1:561202/1‑149 (MQ=255) cAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGaa < 2:590766/150‑1 (MQ=255) aGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAAc < 2:463878/150‑1 (MQ=255) aCTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGc > 1:123077/1‑113 (MQ=255) aCTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGc < 2:123077/113‑1 (MQ=255) aCTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGc > 2:322192/1‑150 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAg > 1:542320/1‑126 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAg < 2:542320/126‑1 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGa < 1:2110993/128‑1 (MQ=255) cGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGa > 2:2110993/1‑128 (MQ=255) ctctATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGa < 1:1030173/150‑1 (MQ=255) tctATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAg > 2:637495/1‑150 (MQ=255) ctATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGc > 1:214727/1‑150 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCg > 1:640349/1‑113 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCg < 2:640349/113‑1 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGCACCTGCCCGCCgcgcc > 2:1415942/1‑149 (MQ=255) tATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa < 2:1776701/150‑1 (MQ=255) tCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTc > 1:2234894/1‑150 (MQ=255) cGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGc > 1:304695/1‑150 (MQ=255) gAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAAACTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGcc > 1:2358577/1‑150 (MQ=255) aaGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGccc < 2:2841997/150‑1 (MQ=255) ccgccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGAt > 2:2563471/1‑150 (MQ=255) atctcAGCTGTCGATCAACCGCGCGCAGTTCAACATGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTTCTATTG‑CGCGATAGCTGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGAt < 2:1642754/146‑1 (MQ=255) gccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAAc > 2:67562/1‑119 (MQ=255) gccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAAc < 1:67562/119‑1 (MQ=255) gccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCg < 1:2601820/150‑1 (MQ=255) ccAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCccgcc > 1:2466211/1‑127 (MQ=255) tGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGc > 2:447728/1‑133 (MQ=255) tGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGc < 1:447728/133‑1 (MQ=255) tGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGt < 2:2944348/146‑1 (MQ=255) tGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTgcgc < 2:2165057/150‑1 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg < 1:1467518/150‑1 (MQ=255) tCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCgg < 2:1927135/150‑1 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCttt > 2:410887/1‑57 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCGGACGGCttt < 1:410887/57‑1 (MQ=255) gATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGt > 1:943895/1‑150 (MQ=255) aaCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTAAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCg > 1:2525850/1‑150 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGccc < 2:1705485/110‑1 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGccc > 1:1705485/1‑110 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGc > 1:2726593/1‑150 (MQ=255) aCCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGc < 1:637495/150‑1 (MQ=255) ccGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGcc > 1:6234/1‑150 (MQ=255) aGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGccc > 2:1448004/1‑150 (MQ=255) ttCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAg > 2:2444172/1‑150 (MQ=255) ttCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAg > 2:681861/1‑150 (MQ=255) aacaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGActtctt > 1:1075190/1‑65 (MQ=255) aacaaGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGActtctt < 2:1075190/65‑1 (MQ=255) aGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCa < 2:1035945/150‑1 (MQ=255) gTAACTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTCAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAg > 2:1274838/1‑150 (MQ=255) tACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGt < 1:2903884/150‑1 (MQ=255) ccTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCAACATTGGCCCAGCAACCCAGTGa > 1:2461746/1‑150 (MQ=255) cTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGACCCTCCCCGCCCCGCGCAACGGCTTGCATATGGTTGCTCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAc < 1:2363510/150‑1 (MQ=255) cTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa < 1:422008/95‑1 (MQ=255) cTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCa > 2:422008/1‑95 (MQ=255) gAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGAccc > 1:2436616/1‑150 (MQ=255) gCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCCGGCCCAGCAACCCAGTGACCCGa > 1:616986/1‑150 (MQ=255) ggttgaaaGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCaa > 2:1749114/6‑136 (MQ=255) cGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGAt < 2:304695/150‑1 (MQ=255) gCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGa > 2:1432257/1‑60 (MQ=255) gCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGa < 1:1432257/60‑1 (MQ=255) gCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAg > 1:477356/1‑150 (MQ=255) aaGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGa < 2:2156174/150‑1 (MQ=255) gCCGTCGGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgt > 2:118070/1‑150 (MQ=255) gCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgt < 2:2734619/150‑1 (MQ=255) cGTCGGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAgttg > 2:2676803/1‑150 (MQ=255) tCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCg > 1:3059466/1‑109 (MQ=255) tCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCg < 2:3059466/109‑1 (MQ=255) cGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCa > 2:1119348/1‑112 (MQ=255) cGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCa < 1:1119348/112‑1 (MQ=255) | GCGTCACCTGGATTCCGCATATGAGCGATCACTTCGCTACAAACCTCAAACTTGCCTGCAGTCACTACCGCTCTATTTCCGAAGTTTGCCGCCAGCTGTCGATCAACCGCGCGCAGTTCAACAAGTACCTGAGCGGGCAAAGCCGTCCGACGGCTTTCAACCTGAAGCG‑TATCGGCGACTTCTTCGGTGTCGAGGATTACGAACTGAACCTGCCCGCCGAGCAGTTCGCCCGTCTGATCGGTGCGCGGGTATCGCCCCAGGCCCAGCAACCCAGTGACCCGATCAGCGAGTTGTTCC > NC_002947/586932‑587228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |