| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 850,995 | C→G | 9.2% | intergenic (‑575/‑230) | pcs ← / → hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 850,995 | 0 | C | G | 9.2% | 392.9 / 27.8 | 131 | intergenic (‑575/‑230) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
| Reads supporting (aligned to +/- strand): ref base C (63/55); new base G (5/7); total (68/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.31e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GCTCTGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCA > NC_002947/850848‑851144 | tctGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGc > 2:1299938/1‑150 (MQ=255) tctGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGc > 2:367116/1‑150 (MQ=255) ctGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATg > 1:2143810/1‑148 (MQ=255) ctGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGcc < 1:1776954/150‑1 (MQ=255) ctGGCTTTTGCTCCTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATg < 2:2143810/148‑1 (MQ=255) tGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGccc < 1:1286043/150‑1 (MQ=255) cTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATGGATGCCCGTc < 2:2579827/150‑1 (MQ=255) tGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATGGATGCCCGTCaagc < 1:66201/150‑4 (MQ=255) tGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCAGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGc < 1:219019/132‑1 (MQ=255) tCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAg < 1:660682/150‑1 (MQ=255) cTAAGCGCGCGGTAGTTCAGGCGATGCAGATTGCGACTTCAGGAGGCCGAGCGCAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGG‑GGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGc < 1:1363319/150‑1 (MQ=17) tctggcttttgatcctgatcttgatcttcGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCA‑GGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCt < 1:401815‑M1/100‑1 (MQ=255) tctggcttttgatcctgatcttgatcttcGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCA‑GGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCt > 2:401815‑M1/30‑129 (MQ=255) gcgcgcGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTc < 2:2314902/150‑1 (MQ=255) ggcttttgatcctgatcttgatcttcGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCgg > 2:796004‑M1/27‑150 (MQ=255) gTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCACGTCTGGCACCTCCCTGCGCAAGGCCTGCGTTCGGcctcc > 2:3021901/1‑150 (MQ=255) ttGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGTTTCATGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGcctcct < 1:1299938/150‑1 (MQ=255) gATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGa > 2:1728465/1‑150 (MQ=255) tCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATGGATGCCCGTCaagcgct > 2:631279/1‑114 (MQ=25) aGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc < 1:2654561/150‑1 (MQ=255) aGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCATTG‑GCTACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc > 1:2832302/1‑150 (MQ=255) ggCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCGTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGGATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcg > 1:2931099/1‑150 (MQ=255) gctcTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTTCTCCCGGGATGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATTCCCGTCACCTCCCTTCGCAAGGCCTGCGTTCTGCCTCCTGAAGTcgc < 2:2931099/147‑1 (MQ=18) gcTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTc > 1:2280027/1‑107 (MQ=255) gcTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTc < 2:2280027/107‑1 (MQ=255) tGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaag > 1:2457419/1‑150 (MQ=255) cAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTc < 1:2055467/128‑1 (MQ=255) aGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCTGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc < 1:1475728/150‑1 (MQ=255) aGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGTGGTTCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc < 1:3021901/150‑1 (MQ=21) gATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATcc > 2:2149756/1‑92 (MQ=255) gATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATcc < 1:2149756/92‑1 (MQ=255) aTTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaa > 2:1838843/1‑150 (MQ=255) ttGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaag < 1:207790/150‑1 (MQ=255) ttGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaag > 1:2403102/1‑150 (MQ=255) GACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATGGATGCCCGTc > 1:1043447‑M1/1‑95 (MQ=255) GACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATGGATGCCCGTc < 2:1043447‑M1/95‑1 (MQ=255) GACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAagatcaagatca > 1:270622‑M1/1‑150 (MQ=255) GACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAagatcaagatca > 1:2430267‑M1/1‑150 (MQ=255) ACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGCCGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGGTTTCGGCCTCCTGAAGTGGCGAAGATCAAGATCAg < 1:880475‑M1/150‑1 (MQ=255) TTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATg > 1:1710721‑M1/1‑86 (MQ=255) TTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATg < 2:1710721‑M1/86‑1 (MQ=255) GGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa > 2:1199592‑M1/1‑132 (MQ=255) GGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa < 1:1199592‑M1/132‑1 (MQ=255) GCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGc > 2:2403102‑M1/1‑150 (MQ=255) CCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGcc < 1:2721209‑M1/150‑1 (MQ=255) CCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGcc < 2:1965130‑M1/150‑1 (MQ=255) CGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa > 2:815857‑M1/1‑126 (MQ=255) CGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa < 1:815857‑M1/126‑1 (MQ=255) CGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCa < 1:1077098‑M1/150‑1 (MQ=255) GAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAg > 2:2250400‑M1/1‑150 (MQ=255) GAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAg > 2:2457419‑M1/1‑150 (MQ=255) gTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCa > 2:147936/1‑150 (MQ=255) gTAGGGCTTGCTCCCGGGAGGACCGCGCTGCACCCGCCACTTACGAAGAAAAACGTTTG‑TGGGCATCCACCGCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGGAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCa > 1:534292/1‑150 (MQ=12) aGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGt < 1:400619/98‑1 (MQ=255) aGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGt > 2:400619/1‑98 (MQ=255) gggCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCaaaa < 1:1728465/150‑1 (MQ=255) gCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaa < 1:976893/116‑1 (MQ=255) ttGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCg > 2:68976/1‑150 (MQ=255) tGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCTTCG‑GGCACAGCGCTTGACGGGCATCCATGCACGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCgg < 2:562924/150‑1 (MQ=255) tGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCATAGCGCATGACATTCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCgg < 2:2092427/150‑1 (MQ=21) tCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGTCCCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGACCAAAAGCCGGCaa < 2:931520/150‑1 (MQ=255) ccGTGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa > 2:2819727/1‑150 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga > 2:2965465/1‑116 (MQ=255) ccGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaaga < 1:2965465/116‑1 (MQ=255) cGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGAc < 1:1838843/150‑1 (MQ=255) aggcCCGCGCTGCCGGCCCGACCCGCC‑GGCACAGCGCTTGATGGGCATCCAGGCCCGTCACCTCCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGa < 2:534292/150‑1 (MQ=18) gaCCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGaaa > 1:1848990/1‑150 (MQ=255) aCCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGa > 2:283989/1‑114 (MQ=255) aCCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGa < 1:283989/114‑1 (MQ=255) cgcgCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTCCCGGACCAACATTCGCCTGACCTCCCTGCGCAAGGCTTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAaca > 1:1303808/1‑150 (MQ=25) gcgcTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac > 2:2685208/1‑150 (MQ=255) cTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGc > 1:3050734/1‑150 (MQ=255) tGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac < 1:489436/146‑1 (MQ=255) tGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAacac > 2:489436/1‑146 (MQ=255) gCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc > 2:2554365/1‑85 (MQ=255) ccccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa > 1:841612/1‑129 (MQ=255) ccccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGa < 2:841612/129‑1 (MQ=255) ccccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCa < 2:2721209/150‑1 (MQ=255) cccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAg < 1:2359101/57‑1 (MQ=255) cccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCa < 2:1397064/125‑1 (MQ=255) cccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAg > 2:2562510/1‑150 (MQ=255) cccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAg > 1:2355829/1‑150 (MQ=255) ccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCaa < 2:1381825/103‑1 (MQ=255) ccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCaa > 1:1381825/1‑103 (MQ=255) ccATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAgg < 2:1848990/150‑1 (MQ=255) cATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGc > 2:1495415/1‑150 (MQ=255) gCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATc < 1:610291/103‑1 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGAc < 1:1755665/108‑1 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGAc < 1:725160/108‑1 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGAc > 2:1755665/1‑108 (MQ=255) tGACGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGAc > 2:725160/1‑108 (MQ=255) aCGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa < 1:957557/89‑1 (MQ=255) aCGGGCATGGATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGa > 2:957557/1‑89 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCg > 1:134393/1‑97 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCg < 2:134393/97‑1 (MQ=255) gggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgc > 1:1641900/1‑150 (MQ=255) ggCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgcg > 2:1187304/1‑150 (MQ=255) gCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTgcgc > 2:2866450/1‑150 (MQ=255) gCATCCATGCCCGTCACCTCCCTGCGCAAAGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatca > 2:2375764/1‑64 (MQ=255) aTCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTa > 1:1514647/1‑150 (MQ=255) | GCTCTGGCTTTTGCTCTTACTGTCGCTTCTAAGCGCGCGGTTGATCAGGCGCTGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCG‑GGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAGGATCAAAAGCCAGATCAAAAGCCGGCAAGACCTGAAAACACCGCTAGGGCAGGCTACGAAAAGGCGATAGCCGCTGCGCTATCA > NC_002947/850848‑851144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |