BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	870,233	G→T	7.8%	R65S (CGC→AGC)	PP_5456 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	870,233	0	G	T	7.8%	304.2 / 8.0	99	R65S (CGC→AGC)	PP_5456	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (48/42); new base T (6/2); total (54/45)
Fisher's exact test for biased strand distribution p-value = 2.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 103 total aligned reads displayed.

TCGGCGAGTGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGCATAAGCGT  >  NC_002947/870085‑870382

tCGGCGAGTGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGa                                                                                                                                                       <  1:3039867/150‑1 (MQ=255)

tCGGCGAGTGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCATTTGTCAGGCAACCCGAAGGCGCTAAGGTCAAGGCCGGTGTGcgcgg                                                                                                                                                       >  2:1430703/1‑149 (MQ=255)

  ggCGAGTGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAgc                                                                                                                                                     <  2:1788875/150‑1 (MQ=255)

      agcgccgggACCGATCAGGAGACCTCGGCATTATCGGGGTTAGATTATAGCGATGTCGCGGGCAGAACTGGCTGCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCaa                                                                                                                                                 <  1:1300175/144‑1 (MQ=255)

        tGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAAc                                                                                                                                               >  2:874587/1‑150 (MQ=255)

           ggggCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCg                                                                                                                                            >  1:1079427/1‑150 (MQ=255)

              gCCCGATCCGGCAGCGTACTGGTAGTCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCCTCCTGGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGc                                                                                                                                         <  1:677257/150‑1 (MQ=255)

               cccGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAAccgccgtt                                                                                                                                        <  1:1367073/150‑7 (MQ=255)

                 cGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTc                                                                                                                                      >  2:320178/1‑150 (MQ=255)

                 cGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTc                                                                                                                                      >  2:775689/1‑150 (MQ=255)

                  gATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTcg                                                                                                                                     >  2:1982447/1‑150 (MQ=255)

                  gATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGGCAGGCAGCGAGGAGGCGCTGGTGCCAACGGTGTTTTGCGCGAGCGCAAACCCGGGCTTcg                                                                                                                                     <  1:858593/150‑1 (MQ=255)

                   aTCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAgc                                                                                                                                                     <  1:1458057/133‑1 (MQ=255)

                   aTCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAgc                                                                                                                                                     >  2:1458057/1‑133 (MQ=255)

                    tCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTcggc                                                                                                                                   <  2:83314/150‑1 (MQ=255)

                       ggAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCggg                                                                                                                                <  1:428565/150‑1 (MQ=255)

                        gagaCGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGc                                                                                                                               >  1:260053/1‑150 (MQ=255)

                         agaCGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCa                                                                                                                              >  2:1549661/1‑150 (MQ=255)

                           aCGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGa                                                                                                                                                       <  2:1281592/123‑1 (MQ=255)

                           aCGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGa                                                                                                                                                       >  1:1281592/1‑123 (MQ=255)

                                cTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑cgcg                                                                                                                      >  1:196152/1‑150 (MQ=255)

                                cTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑cgcg                                                                                                                      >  2:2088090/1‑150 (MQ=255)

                                 ttATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTcggcgg                                                                                                                                 >  1:2620838/1‑139 (MQ=255)

                                 ttATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTcggcgg                                                                                                                                 <  2:2620838/139‑1 (MQ=255)

                                 ttATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑Cgcgc                                                                                                                     <  1:2902250/150‑1 (MQ=255)

                                    taATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCTACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGcccc                                                                                                                  <  1:2681070/150‑1 (MQ=255)

                                     aaTCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCcca                                                                                                                 <  2:196152/150‑1 (MQ=255)

                                      aTCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCaaa                                                                                                                                                <  1:559577/119‑1 (MQ=255)

                                      aTCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCaaa                                                                                                                                                >  2:559577/1‑119 (MQ=255)

                                       tCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCAccagc                                                                                                               >  2:1690981/1‑150 (MQ=255)

                                             ggAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAgccaggcc                                                                                                         >  1:882830/1‑150 (MQ=255)

                                              gagaTTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGACAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAgccaggcca                                                                                                        >  2:2204516/1‑150 (MQ=255)

                                               agaTTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAgccaggccag                                                                                                       <  1:775689/150‑1 (MQ=255)

                                                  ttATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTg                                                                                                    >  2:628411/1‑150 (MQ=255)

                                                    ataGCGATGTCGCGGGTAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGaa                                                                                                  <  2:1283321/150‑1 (MQ=255)

                                                     taGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTGTTTATTGCAGCGTTTGTCAGGCATCGAGGAGGCGCTGGTGCCAACGGCGGTTGGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCCGCTGAAt                                                                                                 >  2:1400739/1‑150 (MQ=255)

                                                      aGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAAtt                                                                                                <  1:320178/150‑1 (MQ=255)

                                                          aTGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGc                                                                                            <  1:2088090/150‑1 (MQ=255)

                                                                 gggCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCTCGCGCAAAc                                                                                                                                               >  1:1160964/1‑93 (MQ=255)

                                                                 gggCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCTCGCGCAAAc                                                                                                                                               <  2:1160964/93‑1 (MQ=255)

                                                                 gggCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTg                                                                                     <  2:1455757/150‑1 (MQ=255)

                                                                   gCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCa                                                                                   <  1:874587/150‑1 (MQ=255)

                                                                   gCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCa                                                                                   >  1:1221056/1‑150 (MQ=255)

                                                                   gCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAAGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCa                                                                                   <  1:2201576/150‑1 (MQ=255)

                                                                     aGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CTCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCAcc                                                                                 >  2:1217661/1‑150 (MQ=255)

                                                                       aaaTGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑Cgcgc                                                                                                                     <  2:2926361/112‑1 (MQ=255)

                                                                       aaaTGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCCGGCGCCTGATGTTGGGCTTCGGCGGGCAGCT‑CGAGAACCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCa                                                                               >  1:533241/1‑150 (MQ=255)

                                                                       aaaTGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGACAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCAGCGGGCAGCT‑Cgcgc                                                                                                                     >  1:2926361/1‑112 (MQ=255)

                                                                          tGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTc                                                                            <  1:1549661/150‑1 (MQ=255)

                                                                             cGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGAt                                                                         <  1:628411/150‑1 (MQ=255)

                                                                              gCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCt                                                                                                     <  1:2457751/121‑1 (MQ=255)

                                                                              gCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCt                                                                                                     >  2:2457751/1‑121 (MQ=255)

                                                                               ccATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGc                                                                       >  1:612205/1‑150 (MQ=255)

                                                                                    cGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTc                                                                                              >  2:1420610/1‑122 (MQ=255)

                                                                                    cGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTc                                                                                              <  1:1420610/122‑1 (MQ=255)

                                                                                    cGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCgt                                                                  <  2:2513730/150‑1 (MQ=255)

                                                                                     gTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCgcg                                                                 >  2:2944002/1‑148 (MQ=255)

                                                                                        gTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCgtggtt                                                              >  2:2663680/1‑149 (MQ=255)

                                                                                               ttGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCt                                                       <  2:260053/150‑1 (MQ=255)

                                                                                                 gtaGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGc                                                     >  2:2434028/3‑150 (MQ=255)

                                                                                                 gCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCACCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGc                                                     >  2:1977484/1‑150 (MQ=255)

                                                                                                  cAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCa                                                    >  1:657021/1‑150 (MQ=255)

                                                                                                   aGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCAt                                                   >  2:2744619/1‑150 (MQ=255)

                                                                                                   aGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCAt                                                   >  1:633053/1‑150 (MQ=255)

                                                                                                       tttGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCt                                               <  2:612205/150‑1 (MQ=255)

                                                                                                       tttGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGC‑GGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCtt                                              >  2:1905755/1‑150 (MQ=255)

                                                                                                         tGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCACCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTg                                             <  1:1690981/150‑1 (MQ=255)

                                                                                                           tCAGGCAGGGAGGAGGAGCTGGTGCCAACGGCGGTTTGCGCATGC‑CAGACGTGTGCTCTTCCGGTCTGGTGCCCGCCCCAGCCAGGCCAGCTGAATTCCGCTGATCTGCACCCAGTCGATGCCTCGTGGTGCCTGGCTGCATTGCTTGaa                                           <  1:2663680/150‑1 (MQ=255)

                                                                                                           tCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGaa                                           <  1:284902/150‑1 (MQ=255)

                                                                                                            cAGGCAGCGAGGATGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAg                                          <  1:3057295/150‑1 (MQ=255)

                                                                                                             aGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATGTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAgg                                         >  2:1118209/1‑150 (MQ=255)

                                                                                                               gCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGcc                                       <  1:1118209/150‑1 (MQ=255)

                                                                                                                 aGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGGGGTGCCTGGCTGCATTGCTTGAAGGCCAg                                     >  1:2618818/1‑150 (MQ=255)

                                                                                                                    gaggagGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCa                                  >  1:1438462/1‑150 (MQ=255)

                                                                                                                    gaggagGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCa                                  >  1:766827/1‑150 (MQ=255)

                                                                                                                      ggaggCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCAtt                                >  2:2542412/1‑150 (MQ=255)

                                                                                                                        gggCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTg                              <  2:533241/149‑1 (MQ=255)

                                                                                                                        aggCGCTGGTGCCCGCGGCGGTTTGCGCGCGCGCACACAAGCGCTTCGGCGGGGAGCT‑CGCGCAACAGCCAGGCCAGCTGAATGTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTg                              <  1:1400739/150‑1 (MQ=255)

                                                                                                                             cTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGGAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATc                         >  2:2137823/1‑150 (MQ=255)

                                                                                                                                gTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGa                                                                          >  2:1418724/1‑98 (MQ=255)

                                                                                                                                gTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGa                                                                          <  1:1418724/98‑1 (MQ=255)

                                                                                                                                   ccAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTc                   >  1:1564769/1‑150 (MQ=255)

                                                                                                                                   ccAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTc                   >  2:2689822/1‑150 (MQ=255)

                                                                                                                                     aaCGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCaa                 <  2:2741936/150‑1 (MQ=255)

                                                                                                                                     aaCGGCGGTTTGAGCGAAACCAATCGCGGACTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGATCATGTGCTCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCaa                 <  1:2204516/150‑1 (MQ=255)

                                                                                                                                       cccgggTTTGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAgg               >  2:203565/5‑150 (MQ=255)

                                                                                                                                        ggcggTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGc              >  1:1713552/1‑150 (MQ=255)

                                                                                                                                        ccgggTTTGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGc              >  1:2543521/4‑150 (MQ=255)

                                                                                                                                        ccgggTTTGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGc              >  2:2018347/4‑150 (MQ=255)

                                                                                                                                          gggTTTGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            >  1:1625020/2‑150 (MQ=255)

                                                                                                                                          cggTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCATCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            <  1:2689822/150‑1 (MQ=255)

                                                                                                                                           ggTTAGCGCGAGCGCCAGGCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATGTCGCTGATCTTCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTTCTTGAAGGCCAGGCATATGCCATTCGCGTCAAgaccgg           >  2:481864/1‑145 (MQ=255)

                                                                                                                                            gTTTGCGCGAGCGCAAGCCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGc          >  2:2351893/1‑150 (MQ=255)

                                                                                                                                            gTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGc          >  2:561421/1‑150 (MQ=255)

                                                                                                                                             tttGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            >  1:827159/1‑147 (MQ=255)

                                                                                                                                             tttGCGCTCGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            <  2:827159/147‑1 (MQ=255)

                                                                                                                                                gcgcGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGCATaa      <  2:633053/150‑1 (MQ=255)

                                                                                                                                                  gcgAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            >  2:2760055/1‑142 (MQ=255)

                                                                                                                                                  gcgAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCgg            <  1:2760055/142‑1 (MQ=255)

                                                                                                                                                    gAGCACAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGCATAAGCGt  <  1:2639715/150‑1 (MQ=255)

TCGGCGAGTGCGGGGCCCGATCAGGAGACGTCCTTATAATCGGGGGGAGATTATAGCGATGTCGCGGGCAGAAATGTCGCCATTCGTGGTTTTTATTGCAGCGTTTGTCAGGCAGCGAGGAGGCGCTGGTGCCAACGGCGGTTTGCGCGAGCGCAAACCCGGGCTTCGGCGGGCAGCT‑CGCGCCCCAGCCAGGCCAGCTGAATTTCGCTGATCTGCACCCAGTCGATGCCCCGTGGTGCCTGGCTGCATTGCTTGAAGGCCAGGCATTTGCCATCCGCGTCAAGGCGGGCATAAGCGT  >  NC_002947/870085‑870382

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`