| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 900,538 | C→G | 7.9% | intergenic (+27/+18) | PP_0784 → / ← cysZ | hypothetical protein/sulfate transport protein CysZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 900,538 | 0 | C | G | 7.9% | 339.9 / 16.9 | 109 | intergenic (+27/+18) | PP_0784/cysZ | hypothetical protein/sulfate transport protein CysZ |
| Reads supporting (aligned to +/- strand): ref base C (58/42); new base G (4/5); total (62/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CCAGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTCT > NC_002947/900389‑900686 | cAGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCt > 1:1848775/1‑150 (MQ=255) aGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTg > 1:2352567/1‑150 (MQ=255) ttGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGc > 1:2393168/1‑150 (MQ=255) ggCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGccc < 1:208442/150‑1 (MQ=255) gCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGcccc < 2:747528/150‑1 (MQ=255) cGTTCGCCGGGTCAAGCGACCTTGCTAACATAGAGAACGCTACACCTATGTAACAGCTAATACTGCTTTCTACGAGTGTCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCt < 1:2215465/150‑1 (MQ=255) tCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGCCCCtttttgc < 2:1692091/145‑7 (MQ=255) gCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAgctcc > 1:832848/1‑150 (MQ=255) ccTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCtt < 2:1812823/139‑1 (MQ=255) ccTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCtt > 1:1812823/1‑139 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGTGGCTGCAGGGCAGCCCCttttt > 1:1313773/1‑125 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCAc > 1:1804491/1‑150 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGCCCCttttt < 2:1313773/129‑5 (MQ=255) aCCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCATCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCAccc > 1:220124/1‑150 (MQ=255) agaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaaca < 2:2057403/150‑1 (MQ=255) agaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaaca > 2:1676300/1‑150 (MQ=255) gaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaacaa > 2:620856/1‑150 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGCCCCttttt < 2:2310434/116‑5 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGCCCCttttt > 1:2310434/1‑112 (MQ=255) ttAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAg < 2:832848/150‑1 (MQ=255) aaGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCGACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGcc > 2:1770713/1‑150 (MQ=255) aGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTGTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGccc > 2:277121/1‑150 (MQ=255) aGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGccc > 2:2479135/1‑150 (MQ=255) cATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGGCTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTgcc < 2:391944/150‑1 (MQ=255) cATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTgcc > 1:2292111/1‑150 (MQ=255) tCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaa > 1:231183/1‑126 (MQ=255) tAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCAc > 2:407743/1‑118 (MQ=255) tAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCAc < 1:407743/118‑1 (MQ=255) tAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGCCCCttt > 1:527580/1‑93 (MQ=255) aaTACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCgg < 1:1797395/150‑1 (MQ=255) tACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTTTCGGTGTTTTTAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGca > 1:2833460/1‑150 (MQ=255) tACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGca > 2:1434721/1‑150 (MQ=255) tACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGca < 1:620856/150‑1 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat < 1:277053/150‑1 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat < 1:2108983/150‑1 (MQ=255) tGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatca > 2:1830751/1‑150 (MQ=255) ctgtctcAGATTGGCAGTCTCGTACCGTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCTCCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatcat < 2:561326/147‑1 (MQ=255) cTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCatcatc < 1:1076411/150‑1 (MQ=255) tttCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCt < 1:927722/84‑1 (MQ=255) tttCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGc > 2:238239/1‑87 (MQ=255) tttCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGc < 1:238239/87‑1 (MQ=255) tttCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCAtcatca < 1:2400867/150‑1 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaacaa < 1:248110/114‑1 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaacaa > 2:248110/1‑114 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCAc > 1:258700/1‑150 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCAc > 2:510845/1‑150 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCAc > 1:2893369/1‑150 (MQ=255) aGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGt > 1:1334609/1‑150 (MQ=255) aGATTGCCACCCTCGAACCCTACAGTTTATCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGt > 1:1806292/1‑150 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAACGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc > 1:2479718/1‑150 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaa > 1:1142596/1‑103 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGaa < 2:1142596/103‑1 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc < 2:2893369/150‑1 (MQ=255) cACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGcc < 2:258700/150‑1 (MQ=255) cACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGcc > 2:1032333/1‑150 (MQ=255) ccTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGc < 1:2165218/136‑1 (MQ=255) ccTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGc > 2:2165218/1‑136 (MQ=255) tCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGaa > 2:1610897/1‑150 (MQ=255) tCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGaa > 2:2764878/1‑150 (MQ=255) aCCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCGCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAatcat > 1:1169217/1‑150 (MQ=255) ccTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAAtcatca < 2:1804491/150‑1 (MQ=255) cTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAg < 2:2833460/150‑1 (MQ=255) cTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAg < 2:1848775/150‑1 (MQ=255) aGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGc > 2:2867008/1‑123 (MQ=255) aGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGc < 1:2867008/123‑1 (MQ=255) aGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGcc < 1:2896582/150‑1 (MQ=255) gTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCa > 2:574292/1‑150 (MQ=255) tcCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCa < 1:2719430/118‑1 (MQ=255) tcCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCa > 2:2719430/1‑118 (MQ=255) gACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTg < 2:2528250/150‑1 (MQ=255) gACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTg > 2:1811797/1‑150 (MQ=255) gACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTg > 1:2528250/1‑150 (MQ=255) aCTTCTAAAACGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGa < 2:2479718/150‑1 (MQ=255) ttCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATg > 1:3055406/1‑150 (MQ=255) tCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATgc < 1:1032333/150‑1 (MQ=255) tAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCt < 1:2633784/120‑1 (MQ=255) aaTCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGcc > 2:2911295/1‑150 (MQ=255) aTCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGccc > 2:1038322/1‑150 (MQ=255) tCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCa > 1:2134392/1‑150 (MQ=255) tCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCATTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGa < 1:1000886/135‑1 (MQ=255) cGCAAAGAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAgg > 2:1655026/1‑150 (MQ=255) cGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAgg > 2:3021546/1‑150 (MQ=255) cGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAgg < 2:633498/150‑1 (MQ=255) cGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAgg > 1:633498/1‑150 (MQ=255) gCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCCCTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGc > 2:434999/1‑150 (MQ=255) aaaaaGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc > 2:17032/1‑103 (MQ=255) aaaaaGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc < 1:17032/103‑1 (MQ=255) aaaaaGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCag > 1:551311/1‑122 (MQ=255) aaaaaGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCag < 2:551311/122‑1 (MQ=255) ggggCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCa < 1:510845/150‑1 (MQ=255) gCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAgcg > 2:418073/1‑150 (MQ=255) gCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTACCGCCTGCATCATCAGGACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAgcg > 1:1751351/1‑150 (MQ=255) cTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAgcgc < 2:422698/150‑1 (MQ=255) tGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCa > 1:2422893/1‑43 (MQ=255) tGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCa < 2:2422893/43‑1 (MQ=255) gCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGGAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCGCTGCCAGCGCtt > 2:115761/1‑150 (MQ=255) cccTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTc < 2:1169217/150‑1 (MQ=255) ccTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATACTCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTCt > 1:2673328/1‑150 (MQ=255) cTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtaggt > 1:1435124/1‑114 (MQ=255) cTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtaggt < 2:1435124/114‑1 (MQ=255) | CCAGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGCCCCTCGCTCCTTCAGCTCCGCT‑CCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTCT > NC_002947/900389‑900686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |