| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 919,675 | G→C | 7.5% | intergenic (‑143/+48) | PP_5458 ← / ← PP_0800 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 919,675 | 0 | G | C | 7.5% | 401.6 / 18.7 | 130 | intergenic (‑143/+48) | PP_5458/PP_0800 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (58/61); new base C (5/5); total (63/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.65e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
ACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGC > NC_002947/919529‑919819 | ttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAgg < 1:1825267/150‑1 (MQ=255) cttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGgc < 2:2902083/150‑1 (MQ=255) cGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCt < 2:1548352/150‑1 (MQ=255) aaGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAg < 1:2105100/150‑1 (MQ=255) aaGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCCATGAAAGCCCCGTGCTAGGGCGCCTGCACAg < 1:2091952/150‑1 (MQ=255) aaGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGATGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAg > 1:437143/1‑150 (MQ=255) tGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgc > 2:2126559/1‑150 (MQ=255) gCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcg > 2:2940278/1‑150 (MQ=255) gCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGttgttc < 1:1102361/133‑6 (MQ=255) gCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGttgttc > 2:1102361/1‑128 (MQ=255) gCTAATGAGAACAGGGGTAAAGTTAGTCCTTTCAGTGAACTCGAAACAGTGCGAATTTCGATAATCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACACCGGGGCTTTCGGCGAAAGCCCCGTCCTAGGGCGCCTGCACATGgcg > 2:31873/1‑150 (MQ=255) cTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcgc > 1:1292559/1‑150 (MQ=255) cTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGt > 2:1027693/1‑127 (MQ=255) cTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGt < 1:1027693/127‑1 (MQ=255) tAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgc < 1:1676520/147‑1 (MQ=255) tAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgc > 2:1676520/1‑147 (MQ=255) tGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCgccgcc < 1:2196143/150‑1 (MQ=255) tGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCgccgcc > 1:1892814/1‑150 (MQ=255) ggACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTg < 1:724034/150‑1 (MQ=255) gACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg > 1:1389001/1‑150 (MQ=255) aGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAg > 2:584657/1‑150 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc > 1:1215758/1‑150 (MQ=255) gTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTa > 2:2353489/1‑150 (MQ=255) aGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGa < 1:1321869/150‑1 (MQ=255) tCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGAGCACAACTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATa > 1:1724394/1‑150 (MQ=255) cAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCg < 2:1292559/150‑1 (MQ=255) tGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGtaa < 1:1549516/150‑1 (MQ=255) tGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGtaa > 1:1941449/1‑150 (MQ=255) cACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcccc > 2:2979936/1‑89 (MQ=255) cACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcccc < 1:2979936/89‑1 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcc < 1:1247430/84‑1 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcc > 2:1247430/1‑84 (MQ=255) tCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATa > 1:2724659/1‑136 (MQ=255) gAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTa < 1:2967915/124‑1 (MQ=255) gatctgagCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACANGGCNCCNCCTTGGCAGGCTNGAAACCGATAAAGGCGTAATAAACCgg < 1:2810446/145‑1 (MQ=255) aaaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg < 1:584657/150‑1 (MQ=255) aaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCGTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCggg < 2:1190672/150‑1 (MQ=255) aCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgggg < 1:2552918/150‑1 (MQ=255) cAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGt > 1:2506464/1‑150 (MQ=255) agagCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGtt > 2:1988088/1‑150 (MQ=255) agagCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGtt > 2:774744/1‑150 (MQ=255) gagCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGttt > 2:83392/1‑150 (MQ=255) agCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGNCTAGAAACCGATAAAGGCGTAATAAACCgggagatc > 2:2810446/1‑145 (MQ=255) aaGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTg < 1:2267055/88‑1 (MQ=255) aaGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTg > 2:2267055/1‑88 (MQ=255) aaGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATgg < 1:2416862/150‑1 (MQ=255) aGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGGATTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATggg < 1:31873/150‑1 (MQ=255) gTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGt > 1:268277/1‑150 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt < 1:1199553/101‑1 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt > 2:1199553/1‑101 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt < 2:698365/150‑1 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt < 1:2353489/150‑1 (MQ=255) gATAAGCACTGTTGCGCAAAAGGTAACGAGCATTGGGTGAAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGCGGTTTCATGGGTtgtg > 2:262518/1‑150 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAATAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc > 2:2537551/1‑150 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 2:2506464/150‑1 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAACGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 2:1892814/150‑1 (MQ=255) cACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTTCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGGAATAAACCGGGGTTTCATGGGTTGTGCGCaaa < 1:3023430/150‑1 (MQ=255) cACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc < 2:580779/125‑1 (MQ=255) cACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAAc > 1:580779/1‑125 (MQ=255) gTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCa < 2:2997414/150‑1 (MQ=255) gcgcAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAc < 2:259613/99‑1 (MQ=255) gcAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGcc < 1:1988088/150‑1 (MQ=255) cAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt > 2:2119140/1‑150 (MQ=255) aGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGTCAGTTTAGAAACCGATAAAGGCGTAATAACCCGGCGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa < 2:1457399/150‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCGGGGCTAGGGCGCGTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTCATAAACCGGGGTTTCATGGGTTGTGAACCAACCCACTGGCTGTAAGc < 2:1724394/150‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCTCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGc < 1:2652215/150‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGc < 2:2838139/150‑1 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAgg < 1:2188456/81‑1 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGc < 1:850570/47‑1 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGc > 2:850570/1‑47 (MQ=255) aaCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt < 1:774744/150‑1 (MQ=255) cGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGc < 1:2940278/150‑1 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGc < 2:2063262/137‑1 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGc > 1:2063262/1‑137 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc > 1:765504/1‑150 (MQ=255) aTCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATATAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt < 2:1984341/146‑1 (MQ=255) aTCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCtt > 1:1984341/1‑146 (MQ=255) tCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt > 2:61968/1‑150 (MQ=255) aTTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt > 2:2199564/1‑148 (MQ=255) aTTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt < 1:2199564/148‑1 (MQ=255) ttGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg < 2:1242278/102‑1 (MQ=255) ggTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTa > 2:2375601/1‑72 (MQ=255) ggTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTa < 1:2375601/72‑1 (MQ=255) tGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGc > 2:1503406/1‑64 (MQ=255) tGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGc < 1:1503406/64‑1 (MQ=255) tGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCtt > 2:2460330/1‑150 (MQ=255) ggAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTc < 2:268277/150‑1 (MQ=255) gAACACCGGGGGTGTCGGCGAGAGCCCGGGGCGAGGGCGCCGGCACGGGGCGCGGCCTGGGCAGGCTAGAAACCGATAAAGGCGTGATAAACCGGGGTTTCACGGGTGGTGCGCAAACCCAGTGCGTGCAAGCTTGCGGTCAGCGCTTCa < 2:437143/150‑1 (MQ=255) gAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCa > 2:1768892/1‑150 (MQ=255) acGGGGCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTg < 1:66692/131‑1 (MQ=255) acGGGGCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGATTAATGGGTTGTCCGTAAAGGCAGGTCCCGCAAGCTTGCCGTCAGCGCTTCATCCtc > 2:29919/1‑149 (MQ=255) cGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgcgc < 1:912353/108‑1 (MQ=255) cGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgcgc > 2:912353/1‑108 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa > 2:557675/1‑73 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa < 1:557675/73‑1 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 2:500340/1‑150 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 2:1687503/1‑150 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGGGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa < 1:954998/124‑1 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGGGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa > 2:954998/1‑124 (MQ=255) tttCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGc > 1:2162733/1‑150 (MQ=255) | ACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGC > NC_002947/919529‑919819 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |