| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,164,788 | C→T | 16.2% | G208D (GGC→GAC) | hexR ← | DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,164,788 | 0 | C | T | 16.2% | 292.4 / 42.8 | 133 | G208D (GGC→GAC) | hexR | DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (56/52); new base T (11/10); total (69/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTGGGCCGA > NC_002947/1164642‑1164936 | gggTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCa < 2:2399788/150‑1 (MQ=255) tCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCa > 1:2008262/1‑150 (MQ=255) tCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCa > 1:458717/1‑150 (MQ=255) cATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCAc < 2:461364/150‑1 (MQ=255) tGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCCTTTGCCCATGGCGAGCCTGCGGCGGTGAGGCCCAGCACCg > 2:1023497/1‑150 (MQ=255) ccGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATGCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGaa > 2:1775891/1‑150 (MQ=255) cGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAg > 2:3061566/1‑150 (MQ=255) cGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAg < 2:16633/150‑1 (MQ=255) cGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAg > 2:1164944/1‑150 (MQ=255) ggTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAgc < 1:1775891/150‑1 (MQ=255) cAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGtt > 2:1068623/1‑150 (MQ=255) aGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGttt < 2:1005756/150‑1 (MQ=255) gTACATCGAGCACGGTCAGCTGGATGATCCGCGAGTTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGtttt < 1:1581313/150‑1 (MQ=255) cATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGGAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCAc > 1:1496799/1‑150 (MQ=255) cATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCAc < 1:1023497/150‑1 (MQ=255) aTCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTTGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACg > 1:113380/1‑150 (MQ=255) tCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGCATGTGCAGGCTCAGGCTGCAGGCATTGGCCCGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGt > 2:141637/1‑150 (MQ=255) tCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGGCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGt > 1:437540/1‑150 (MQ=255) tCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGt < 1:93950/150‑1 (MQ=255) tCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCGTCCGGCAGCGGAATGTGCAGGCTACGCTTTCAGTTTTTGGCCAGTGGCGAGCCTGCGGCGGTAAGGTCCAGCACCGAAGCGCCGTGTTCACGt > 1:2994071/1‑150 (MQ=255) cACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAg < 1:1566086/150‑1 (MQ=255) gCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGGCAGTGGCGGGCCTGCGGCGGTGCGGACCAGCACCGAAGCGCCGGTTTCACGAGCTAggaagggcg > 2:512017/1‑143 (MQ=255) cTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCAc > 1:2694994/1‑150 (MQ=255) ggATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACtt > 1:2330742/1‑150 (MQ=255) gatCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGGAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGAc > 2:2439535/1‑150 (MQ=255) tCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCa > 2:1683267/1‑150 (MQ=255) cgcgAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGt > 2:2752639/1‑150 (MQ=255) cgcgAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGt < 2:458717/150‑1 (MQ=255) cgAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCa < 2:1408609/128‑1 (MQ=255) cgAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCa > 1:1408609/1‑128 (MQ=255) aGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTcgc > 1:722355/1‑150 (MQ=255) tCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCggg > 2:318536/1‑150 (MQ=255) cATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGt < 1:813591/150‑1 (MQ=255) aTTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTg > 1:812271/1‑150 (MQ=255) aTGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGcc < 1:114449/86‑1 (MQ=255) aTGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCAc < 1:1497105/109‑1 (MQ=255) aTGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCAc > 2:1497105/1‑109 (MQ=255) tAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGgtg > 1:856544/1‑150 (MQ=255) aGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGgtgt < 2:12259/150‑1 (MQ=255) aTGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAg > 1:2856369/1‑150 (MQ=255) ggTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCgg < 2:1699966/130‑1 (MQ=255) ggTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCgg > 1:1699966/1‑130 (MQ=255) ggTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAAt > 2:2748825/1‑150 (MQ=255) gTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATg < 1:1379010/150‑1 (MQ=255) tATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGa < 2:2694994/150‑1 (MQ=255) cTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTa < 2:2571844/139‑1 (MQ=255) cTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTa > 1:2571844/1‑139 (MQ=255) cTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCa < 1:1164944/150‑1 (MQ=255) ttCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCAc > 1:1858069/1‑150 (MQ=255) tCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGgt > 2:860902/1‑134 (MQ=255) cGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGaa < 2:1981472/150‑1 (MQ=255) aaTGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGcc > 1:1950061/1‑150 (MQ=255) aTGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCg < 1:2892122/150‑1 (MQ=255) aTGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCg < 1:457930/150‑1 (MQ=255) gCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTcgc > 1:1022347/1‑105 (MQ=255) gCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCATGAACAGATCGCCGgtgt > 2:270506/1‑150 (MQ=255) aggctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTgg < 2:2755706/150‑1 (MQ=255) aggctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGCgg < 1:3061566/150‑1 (MQ=255) ggctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTggg < 1:2752639/150‑1 (MQ=255) gctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGc > 2:945027/1‑150 (MQ=255) gctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTcgcg < 2:295170/102‑1 (MQ=255) gctcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTcgcg > 1:295170/1‑102 (MQ=255) gctcaggctGCAGGCATTAGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGc > 2:188792/1‑150 (MQ=255) tcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGa > 2:750272/1‑150 (MQ=255) tcaggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGa < 1:1733966/150‑1 (MQ=255) aggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGAcc < 2:2330742/150‑1 (MQ=255) ggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGt > 2:1295499/1‑68 (MQ=255) ggctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGt < 1:1295499/68‑1 (MQ=255) gctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGa > 1:2479828/1‑150 (MQ=255) ctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAg < 1:945027/150‑1 (MQ=255) ctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCATGAACAGATCGCCGGTGTGGGCGACCGAg < 1:270506/150‑1 (MQ=255) ctGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAg < 1:1683267/150‑1 (MQ=255) tGCAGGCATTGGCCAGTGGCGAGGCGGCGGGGGTGAGGGCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGGGCGATTTCGACCAGTTCGCGGGGGCGCCCGGTGTAGGAAATGATCACGGACAGAGCGCCGGTGTGGGCGACCGAgg < 2:113380/150‑1 (MQ=255) cAGGCATTGGCCAGTGGTGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGcc > 1:2253366/1‑150 (MQ=255) aGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCa > 1:1484071/1‑150 (MQ=255) aGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCa < 1:2748825/150‑1 (MQ=255) ggCATTGGCCAGTGGCGAGCCGGCGGGGGTGAGGTCCAGCACCGAAGCGCTGTTTTCCCGTGCCAGCCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGTTCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAg < 2:959566/150‑1 (MQ=255) gCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCGTCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGc > 1:728381/1‑150 (MQ=255) aTTGGCCAGTGGCGAGGCTGCGGCGGTGAGGGCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCAt < 2:856544/150‑1 (MQ=255) ttGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCgg < 1:978773/87‑1 (MQ=255) gCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCggg > 1:1648827/1‑85 (MQ=255) gCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCggg < 2:1648827/85‑1 (MQ=255) gCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATgcgc > 1:2312610/1‑150 (MQ=255) ccAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCt > 2:2543606/1‑150 (MQ=255) cAGTGGCGAGCCTGCGGCGGTGAGGTCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTg > 2:2217846/1‑150 (MQ=255) cAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCg > 1:920067/1‑121 (MQ=255) ggtgAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATc < 2:2253366/147‑1 (MQ=255) ggCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATc < 2:1003946/150‑1 (MQ=255) gCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGACGGTGTGCGCGACCTAGGCCTTCATGCGCTGCATCa < 2:812271/150‑1 (MQ=255) gAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACATATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGc < 1:1061890/150‑1 (MQ=255) gAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGc > 2:173374/1‑150 (MQ=255) gCCTGCGGCGGTGAGGCCCAGCACAGAAACGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGGGGAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGcac > 1:726976/1‑150 (MQ=255) cTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACAt > 1:2314397/1‑150 (MQ=255) gcggcgGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCg > 2:909961/1‑150 (MQ=255) gTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCa > 2:2728023/1‑121 (MQ=255) gTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCa < 1:2728023/121‑1 (MQ=255) gTGAGGCCCAGCACCGAAGCGCCGTTTTCACGCGCCAGTCTCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTgg < 2:728381/150‑1 (MQ=255) gAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTGGGc < 1:2651331/150‑1 (MQ=255) gCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTGGGCCGa > 1:3018472/1‑150 (MQ=255) gCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTGGGCCGa > 2:2226396/1‑150 (MQ=255) | GGGTCATGCCGGTGGCCAGTACATCGAGCACGGTCAGCTGGATGATCCGCGAGGTCATTGGCATGTAGATGTCGGTATCTTCCGGCAGCGGAATGTGCAGGCTCAGGCTGCAGGCATTGGCCAGTGGCGAGCCTGCGGCGGTGAGGCCCAGCACCGAAGCGCCGTTTTCACGTGCCAGGCGCGCCACTTCGACCAGTTCGCGGGTGCGCCCGGTGTAGGAAATGATCACGAACAGATCGCCGGTGTGGGCGACCGAGGCCAGCATGCGCTGCATCAGCACATCGGCGTGGGCCGA > NC_002947/1164642‑1164936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |