| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,178,758 | G→C | 5.2% | intergenic (+57/+37) | guaA → / ← PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,178,758 | 0 | G | C | 5.2% | 433.5 / 12.5 | 136 | intergenic (+57/+37) | guaA/PP_1033 | glutamine‑hydrolyzing GMP synthase/sulfatase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (64/64); new base C (4/3); total (68/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.54e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
TCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTC > NC_002947/1178610‑1178905 | tCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGa > 2:1132833/1‑150 (MQ=255) cgTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGCGTGGGCGTGATCGGGTAGCCAGCCCAGGCTGAC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCg > 2:2104219/2‑150 (MQ=255) gTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCgg > 2:2828923/1‑150 (MQ=255) catcaACGAAATCGACGGTATCTCGCGCGTTACCTACCACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGCC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCt < 2:265233/150‑1 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTg > 1:1033496/1‑149 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTgg > 2:2316896/1‑150 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTgg > 1:902854/1‑150 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑AATCATGCGGGCTTTCTg < 2:1033496/149‑1 (MQ=255) tcaACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGAACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTgg > 1:1568792/1‑150 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGCTACACCAGAAAGCCCGC‑ATGATTGCGGGCt > 1:2205926/1‑142 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTc > 1:1089544/1‑145 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTc < 2:1089544/145‑1 (MQ=255) aaCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGtt > 1:1885139/1‑150 (MQ=255) aCGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTc < 2:1695547/150‑1 (MQ=255) gACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTgttcgt > 1:2572910/1‑150 (MQ=255) aCGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTgttcgtt < 1:1641643/150‑1 (MQ=255) tATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGa < 1:321717/150‑1 (MQ=255) tcGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGc > 1:2028627/1‑150 (MQ=255) tcGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGc < 1:1654572/150‑1 (MQ=255) aCCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAttcttc < 2:2028627/150‑1 (MQ=255) ccTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct > 2:1147653/1‑150 (MQ=255) cTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACACGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTg < 1:2674721/150‑1 (MQ=255) acgacgTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGc < 2:249063/150‑1 (MQ=255) cgTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTc < 2:1537523/150‑1 (MQ=255) gtCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGCAATCA‑TGCGGGCTTTCTg < 2:2836305/109‑1 (MQ=38) gAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCaa > 2:1048437/1‑150 (MQ=255) gAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTATGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGCCTTTCTCGCaa > 2:2307973/1‑150 (MQ=255) gccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAgcg > 2:2554003/1‑150 (MQ=255) ccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg > 1:598789/1‑99 (MQ=255) ccgccTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg < 2:598789/99‑1 (MQ=255) cTGCCACTATCGCGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg < 1:2973057/95‑1 (MQ=255) cTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTg > 2:2973057/1‑95 (MQ=255) cTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCt > 2:2881391/1‑117 (MQ=255) cTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCt < 1:2881391/117‑1 (MQ=255) cTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTc < 1:2796169/150‑1 (MQ=255) gCCACTATCGAGTGGGAGTGATCGGCTATCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTg < 1:2307973/150‑1 (MQ=255) ccACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTgg < 1:2565755/150‑1 (MQ=255) cACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAttc < 2:791499/118‑1 (MQ=255) cACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAttc > 1:791499/1‑118 (MQ=255) aCTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct > 2:743181/1‑121 (MQ=255) aCTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 1:743181/121‑1 (MQ=255) aCTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTa < 2:1544801/150‑1 (MQ=255) cTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAg < 2:1225074/150‑1 (MQ=255) tATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAgg < 1:1048437/150‑1 (MQ=255) aTCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGCTTGCGGGCTTTCTGGTTCTTTTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGc < 1:1147653/150‑1 (MQ=255) aTCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGc < 1:1211850/150‑1 (MQ=255) tGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATa < 2:245955/122‑1 (MQ=255) tGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATa > 1:245955/1‑122 (MQ=255) tGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAag > 1:1081749/1‑150 (MQ=255) aTCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCCTATTCTTCTg < 2:870359/105‑1 (MQ=255) aTCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCCTATTCTTCTg > 1:870359/1‑105 (MQ=255) tCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa < 1:1117735/146‑1 (MQ=255) tCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa > 2:1117735/1‑146 (MQ=255) cGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagcagc < 1:424509/150‑1 (MQ=255) cGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagcagc < 2:1747686/150‑1 (MQ=255) ggTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCt > 1:1901713/1‑150 (MQ=255) tgccagccTGGGCTGGCTACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct > 2:1840297/2‑98 (MQ=255) tgccagccTGGGCTGGCTACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATtcttct < 1:1840297/97‑1 (MQ=255) ccagccCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGctcc > 1:370202/1‑150 (MQ=255) cagcctgggctggctACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGctcc > 1:1498850/8‑150 (MQ=255) cAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagcagc < 2:775079/137‑1 (MQ=255) cAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAagcagc > 1:775079/1‑137 (MQ=255) cAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTg > 2:1907045/1‑150 (MQ=255) cAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTg > 1:1435773/1‑150 (MQ=255) aGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGc < 1:1504289/150‑1 (MQ=255) c‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAAc < 1:35964/150‑1 (MQ=255) ccGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATg < 2:1816572/144‑1 (MQ=255) ccGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCg > 1:1054627/1‑150 (MQ=255) ccGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCATGATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCg > 1:1568996/1‑150 (MQ=255) tgCAGGACGGATACACCAGAAAGCCCGC‑ATGCTTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCGTTCTGTTAGGCGGTAGAGGAAGGCAGCCTGCTCCTCACTGCGATGTACTctt > 1:443020/2‑148 (MQ=255) cGCAGGACGGATACTCCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAt < 2:1984756/71‑1 (MQ=255) cGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTAt > 1:1984756/1‑71 (MQ=255) cGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa < 1:1717309/120‑1 (MQ=255) cGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa > 2:1717309/1‑120 (MQ=255) gCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTc < 2:1081749/150‑1 (MQ=255) ggACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTgg < 2:2562291/83‑1 (MQ=255) ggACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCAcc > 2:2366027/1‑150 (MQ=255) cgatctaTACACCCGCAAGCACGC‑ATGATTGCGGGCTTTGTGGTTCTTGTTGGTTTAGATGGTGTATTTTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCCGCCTGCCCCTCACTGCGATGAACTCGTCAcc < 2:1440433/144‑1 (MQ=255) gACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCAccc < 1:2554003/150‑1 (MQ=255) gATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCa > 2:2024186/1‑150 (MQ=255) aTACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAgcgc > 2:3071165/1‑87 (MQ=255) acCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata < 1:1537098/101‑1 (MQ=255) acCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata > 2:1537098/1‑101 (MQ=255) acCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCa < 1:2561207/138‑1 (MQ=255) acCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGt > 2:1403579/1‑150 (MQ=255) acCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGt > 1:2837242/1‑150 (MQ=255) cAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGCATGCAGAATTCCCTTCCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCAcgcagat > 2:1807797/1‑146 (MQ=255) aGAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTtata > 1:2069277/1‑98 (MQ=38) aGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTgg < 2:2572910/150‑1 (MQ=255) gAAAGCCCGCAATCA‑TGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGAt < 2:2158988/124‑1 (MQ=39) gAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGATTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTggg < 1:2828923/150‑1 (MQ=255) aaaGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTgggg < 1:1403579/150‑1 (MQ=255) aaGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTAGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTACTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTggggg > 2:261551/1‑150 (MQ=255) aGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGATTTCTGGCAAATAGCGCTTGCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGt > 1:1149222/1‑150 (MQ=255) cccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTgggg < 1:1953625/146‑1 (MQ=255) cccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGc < 1:1951986/150‑1 (MQ=255) cccGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGATTTGTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGc > 2:1951986/1‑150 (MQ=255) gC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGaaa < 2:160988/94‑1 (MQ=255) aTGATTGCGGGCTTTATGGTTCTTGTTAGTTCATATGGCAGATTCTTCTTGCTTGCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTc < 2:1568996/150‑1 (MQ=255) gATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCCCAACGCGTGGAGGGTga > 2:2788920/1‑142 (MQ=255) | TCAGCGGTCGTATCATCAACGAAATCGACGGTATCTCGCGCGTTACCTACGACGTGTCGAGCAAGCCGCCTGCCACTATCGAGTGGGAGTGATCGGGTAGCCAGCCCAGGCTGGC‑ACCCGCAGGACGGATACACCAGAAAGCCCGC‑ATGATTGCGGGCTTTCTGGTTCTTGTTCGTTCAGATTGCTTATTCTTCTGGCTTTCTGGCAAATAGCGCTTTCTGGTAGGCGTTATAGGAAAGCAGCCTGCTCCTCACTGCGATGAACTCGTCACCCTCCACGCGTTGGGGGTGCTTTTC > NC_002947/1178610‑1178905 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |