| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,248,220 | T→C | 6.0% | intergenic (+27/+41) | argG → / ← PP_1089 | argininosuccinate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,248,220 | 0 | T | C | 6.0% | 438.0 / 9.4 | 145 | intergenic (+27/+41) | argG/PP_1089 | argininosuccinate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (74/62); new base C (6/3); total (80/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
CCAACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGT > NC_002947/1248072‑1248369 | ccAACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTc > 2:1379608/1‑150 (MQ=255) cAACATCGCCACCTTTGAAGAAGATGGTGGTGCCTATAACCAGGAAGATGCTGATGTCTTCATCAAGCTCAATGCACTGCGTGTGCGCATTACCGTCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGGGCGAAAACCCCGGCTCg > 1:1239293/1‑150 (MQ=255) aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCTCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:2505368/1‑150 (MQ=255) aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCAAACAAGGGCCGTTAGCAGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:2505715/1‑150 (MQ=255) tCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCg < 2:2123687/150‑1 (MQ=255) gCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg > 2:2602567/1‑150 (MQ=255) cACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGt < 1:2602567/150‑1 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg > 2:739240/1‑144 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg < 1:739240/144‑1 (MQ=255) gaagaaGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttttt > 1:394260/1‑149 (MQ=255) aagaagATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttttta < 2:394260/150‑3 (MQ=255) aagaagATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTAt > 1:1309004/1‑150 (MQ=255) aagaagATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTAt < 2:1391091/150‑1 (MQ=255) gaagaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGc > 1:2802075/1‑150 (MQ=255) aTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttttc > 1:921785/1‑139 (MQ=255) aTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttttc < 2:921785/140‑2 (MQ=255) tggtgCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGTAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCaa > 1:687447/1‑150 (MQ=255) cTACAACCAGGCAGATGCTTCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCgg < 1:1513529/150‑1 (MQ=255) cTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCgg < 2:1862804/150‑1 (MQ=255) tACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg > 2:251401/1‑122 (MQ=255) cAACCAGGCAGATGCTGCTGGCTTAATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTc < 2:648554/150‑1 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCcgc > 2:2192303/1‑136 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCcgc < 1:2192303/136‑1 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCg > 2:2040865/1‑150 (MQ=255) ccAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGtt > 2:2983882/1‑150 (MQ=255) gCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttt < 1:1357659/118‑1 (MQ=255) tgctgGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGc < 2:3059345/118‑1 (MQ=255) ggctgGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTCTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTgg > 2:2102198/2‑150 (MQ=255) atcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTc > 1:2090879/1‑88 (MQ=255) atcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTc < 2:2090879/88‑1 (MQ=255) atcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCAcatcat > 2:2979388/1‑150 (MQ=255) tcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACatcatc < 2:2802075/150‑1 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttt > 2:238363/1‑100 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttt < 1:238363/100‑1 (MQ=255) aGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATCCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGcc < 2:594372/150‑1 (MQ=255) gCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCg < 1:2010961/89‑1 (MQ=255) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCt > 1:132217/1‑150 (MQ=255) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGACCGCGCAAAGTCGGGTCGTTCAACTTCGGTGGCTCACATAATCGCCCt > 1:493632/1‑150 (MQ=255) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGtttt < 2:1949144/95‑1 (MQ=38) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGtttt > 1:1949144/1‑95 (MQ=38) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGTGGTTTTTTTATGCCCGCGCAAAGGc > 2:17342/1‑111 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa > 2:2909291/1‑150 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCCCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTgg > 1:581368/1‑131 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg > 2:1922336/1‑85 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGtt > 1:1063742/1‑118 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAg > 1:1836021/1‑150 (MQ=255) gCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg < 1:1532780/83‑1 (MQ=255) cACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgc < 1:1656970/150‑1 (MQ=255) tGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCt < 2:687447/150‑1 (MQ=255) tGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGCTGGCTGACATCATCGCCCTCCGGTGCGCt > 2:26310/1‑150 (MQ=255) cGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGa < 1:2400387/150‑1 (MQ=255) gTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt < 1:1861705/150‑1 (MQ=255) tATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcgcagctt > 2:1828479/1‑145 (MQ=255) cgccAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCGACTTCGGTgg < 2:1319165/108‑1 (MQ=255) gccAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGcac > 1:3048722/1‑150 (MQ=255) caacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAt > 1:963555/1‑150 (MQ=255) aacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAtt < 1:1747919/150‑1 (MQ=255) acaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCTTCGAGGGCGCTGATCGAAAGCTGCGCACATTg > 1:2589627/1‑150 (MQ=255) acaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTg > 1:798540/1‑150 (MQ=255) aGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg > 2:2284173/1‑83 (MQ=255) aGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg < 1:2284173/83‑1 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt < 1:2178290/128‑1 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGt < 2:798540/150‑1 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTc < 1:2926122/82‑1 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTc > 2:2926122/1‑82 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCTCTGCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCt < 1:2090027/150‑1 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCt > 2:44923/1‑150 (MQ=255) ccGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGttttttt < 2:2485345/60‑1 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTcc < 1:26310/150‑1 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTcc < 2:2199101/150‑1 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTcc > 1:3045572/1‑150 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg < 2:1108180/73‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg > 1:1108180/1‑73 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGccc < 2:2952995/105‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGccc > 1:2952995/1‑105 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa > 1:2653216/1‑150 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCAGCTCAGACGTGTGCTCTTCCGTTCTGTCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa < 1:2983882/150‑1 (MQ=255) ctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAt < 1:2040865/150‑1 (MQ=255) ctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAt > 1:2248480/1‑150 (MQ=255) ctgctCTGATTGCTGGCGTGCGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAt < 1:637667/150‑1 (MQ=255) tgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAtt > 1:2536931/1‑150 (MQ=255) ctctGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTAc < 2:2505368/150‑1 (MQ=255) aTTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCTCACATTGACGTCTGTCCAGATTACaa > 2:504380/1‑147 (MQ=255) aTTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaa < 1:504380/147‑1 (MQ=255) aTTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAg > 1:792511/1‑150 (MQ=255) tGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGcc > 2:100296/1‑149 (MQ=255) tGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGcc < 1:100296/149‑1 (MQ=255) gCGTGTGCGAAAACCCCGGCCCGGTGCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGa > 2:2491904/1‑150 (MQ=255) tgtgCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcgc < 2:2536931/150‑1 (MQ=255) aaaaaaaCCCCGGACCGAGCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcgcgcg > 1:1968548/4‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCTGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt > 2:2146075/1‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt > 1:1729271/1‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt > 2:2012754/1‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt < 2:1309004/150‑1 (MQ=255) cccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTTGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGATGTCTGTCCAGATTACAAAAgc < 2:371294/130‑1 (MQ=255) cccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTTGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGATGTCTGTCCAGATTACAAAAgc > 1:371294/1‑130 (MQ=255) cccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCg > 2:1100482/1‑150 (MQ=255) ccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGCCTGTCCAGATTACAAAAgc > 1:2214229/1‑129 (MQ=255) cGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCggg > 2:626911/1‑150 (MQ=255) tCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGt > 2:93858/1‑150 (MQ=255) | CCAACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGT > NC_002947/1248072‑1248369 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |