| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,248,223 | G→A | 5.7% | intergenic (+30/+38) | argG → / ← PP_1089 | argininosuccinate synthase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,248,223 | 0 | G | A | 5.7% | 421.2 / 7.7 | 139 | intergenic (+30/+38) | argG/PP_1089 | argininosuccinate synthase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (70/61); new base A (5/3); total (75/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
AACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTGG > NC_002947/1248074‑1248372 | aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCTCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:2505368/1‑150 (MQ=255)aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:648554/1‑150 (MQ=255)aaCATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCAAACAAGGGCCGTTAGCAGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCgg > 1:2505715/1‑150 (MQ=255) tCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCg < 2:2123687/150‑1 (MQ=255) gCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg > 2:2602567/1‑150 (MQ=255) cTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttt > 1:1603514/1‑150 (MQ=255) tttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCggg > 2:739240/1‑144 (MQ=255) ttGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttt < 1:573113/150‑1 (MQ=255) gaagaaGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttttt > 1:394260/1‑149 (MQ=255) aagaagATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTAt > 1:1309004/1‑150 (MQ=255) aagaagATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTAt < 2:1391091/150‑1 (MQ=255) gaagaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGc > 1:2802075/1‑150 (MQ=255) gaTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTAt > 1:863123/1‑145 (MQ=255) aTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttttc < 2:921785/140‑2 (MQ=255) aTGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttttc > 1:921785/1‑139 (MQ=255) ggtggtGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCgcgc > 1:2085464/1‑150 (MQ=255) tggtgCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGTAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCaa > 1:687447/1‑150 (MQ=255) ccTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCg < 2:2085464/150‑1 (MQ=255) cTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCgg < 2:1862380/150‑1 (MQ=255) tACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg > 2:251401/1‑122 (MQ=255) cAACCAGGCAGATGCTGCTGGCTTAATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTc < 2:648554/150‑1 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCcgc < 1:2192303/136‑1 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCcgc > 2:2192303/1‑136 (MQ=255) aaCCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCg > 2:2040865/1‑150 (MQ=255) ccAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGtt > 2:2983882/1‑150 (MQ=255) gCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttt > 2:1357659/1‑118 (MQ=255) gCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGttt < 1:1357659/118‑1 (MQ=255) gATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTc > 1:2590599/1‑150 (MQ=255) gctgctGTCTTCATCAATCTCAATGCACTGCTTTTGCGTATTACCGCCAACAAGGGCCGTTCGCTGCTCTCATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGTCCCCGCAAAGGCGGGTCGTTCAACTTCGGt < 2:1239293/150‑1 (MQ=255) tgctgGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGc < 2:3059345/118‑1 (MQ=255) tgctgGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGc > 1:3059345/1‑118 (MQ=255) ggCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTca < 1:1379608/150‑1 (MQ=255) atcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCAcatcat > 2:2979388/1‑150 (MQ=255) tcaAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACatcatc < 2:2802075/150‑1 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttt < 1:238363/100‑1 (MQ=255) aaGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGtttttt > 2:238363/1‑100 (MQ=255) aGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATCCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGcc < 2:594372/150‑1 (MQ=255) gCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCg < 1:2010961/89‑1 (MQ=255) cTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGACCGAGCCGGGGtttt < 2:1949144/95‑1 (MQ=38) cAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCg > 1:2925521/1‑150 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGTGGTTTTTTTATGCCCGCGCAAAGGc < 1:17342/111‑1 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGa > 2:2909291/1‑150 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCCCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTgg < 2:581368/131‑1 (MQ=255) aaTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCCCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTgg > 1:581368/1‑131 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg > 2:1922336/1‑85 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg < 1:1922336/85‑1 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGtt < 2:1063742/118‑1 (MQ=255) aTGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGtt > 1:1063742/1‑118 (MQ=255) gCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg < 1:1532780/83‑1 (MQ=255) gCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCgg > 2:1532780/1‑83 (MQ=255) cACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgc < 1:1656970/150‑1 (MQ=255) aCTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGAGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcg > 2:420119/1‑150 (MQ=255) tGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCt < 2:687447/150‑1 (MQ=255) tGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGCTGGCTGACATCATCGCCCTCCGGTGCGCt > 2:26310/1‑150 (MQ=255) cGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGa < 1:2400387/150‑1 (MQ=255) gTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt < 1:1861705/150‑1 (MQ=255) tATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTgcgcagctt > 2:1828479/1‑145 (MQ=255) tATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATc < 1:2979388/150‑1 (MQ=255) cgccAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCGACTTCGGTgg > 1:1319165/1‑108 (MQ=255) gccAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGcac > 1:3048722/1‑150 (MQ=255) caacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAt > 1:963555/1‑150 (MQ=255) caacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAt > 1:1977200/1‑150 (MQ=255) aacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAtt > 1:2635176/1‑150 (MQ=255) aacaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACAtt < 1:1747919/150‑1 (MQ=255) acaaGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCTTCGAGGGCGCTGATCGAAAGCTGCGCACATTg > 1:2589627/1‑150 (MQ=255) aGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg > 2:2284173/1‑83 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt < 1:2178290/128‑1 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGAt > 2:2178290/1‑128 (MQ=255) gggCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGt < 2:798540/150‑1 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTc > 2:2926122/1‑82 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCTCTGCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCt < 1:2090027/150‑1 (MQ=255) gCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCt > 2:44923/1‑150 (MQ=255) ccGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGttttttt < 2:2485345/60‑1 (MQ=255) cGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGt < 2:2600377/150‑1 (MQ=255) ttCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTcc < 1:26310/150‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCggg > 1:1108180/1‑73 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGccc < 2:2952995/105‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGccc > 1:2952995/1‑105 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa < 1:44923/150‑1 (MQ=255) gctgctCTGATTGCTGGCGTGTGCGAAAACCCCAGCTCAGACGTGTGCTCTTCCGTTCTGTCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGa < 1:2983882/150‑1 (MQ=255) ctgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAt > 1:2248480/1‑150 (MQ=255) tgctCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGAtt > 1:2536931/1‑150 (MQ=255) ctctGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTAc < 2:2505715/150‑1 (MQ=255) aTTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACaa < 1:504380/147‑1 (MQ=255) aTTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAg > 1:792511/1‑150 (MQ=255) tGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGcc < 1:100296/149‑1 (MQ=255) gCGTGTGCGAAAACCCCGGCCCGGTGCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGa > 2:2491904/1‑150 (MQ=255) tgCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcgcgc > 1:2280312/1‑150 (MQ=255) aaaaaaaCCCCGGACCGAGCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGAcgcgcg > 1:1968548/4‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt > 2:2012754/1‑150 (MQ=255) gAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCt < 2:1309004/150‑1 (MQ=255) aaaaaCCCCGGGCCGAGCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCGCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGgcgcgcgcg > 2:211335/2‑149 (MQ=255) aaaCCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTgg > 1:740328/1‑150 (MQ=255) cccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTTGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGATGTCTGTCCAGATTACAAAAgc < 2:371294/130‑1 (MQ=255) cccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCg > 2:1100482/1‑150 (MQ=255) ccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAgc < 2:2214229/129‑1 (MQ=255) ccGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGCCTGTCCAGATTACAAAAgc > 1:2214229/1‑129 (MQ=255) cGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCggg > 2:626911/1‑150 (MQ=255) tCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGt > 2:93858/1‑150 (MQ=255) gTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTgg < 2:3045572/150‑1 (MQ=255) | AACATCGCCACCTTTGAAGAAGATGGTGGTGCCTACAACCAGGCAGATGCTGCTGGCTTCATCAAGCTCAATGCACTGCGTATGCGCATTGCCGCCAACAAGGGCCGTTCGCTGCTCTGATTGCTGGCGTGTGCGAAAACCCCGGCTCGGTCCGGGGTTTTTTTATGCCCGCGCAAAGGCGGGTCGTTCAACTTCGGTGGCTCACATCATCGCCCTCGAGTGCGCTGATCGAAAGCTGCGCACATTGACGTCTGTCCAGATTACAAAAGCGCCAGACGCGCGCTGGCTCGGGCGGTTGG > NC_002947/1248074‑1248372 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |