| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,475,002 | T→G | 9.9% | intergenic (‑775/+26) | algD ← / ← PP_1289 | GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,475,002 | 0 | T | G | 9.9% | 280.7 / 25.2 | 111 | intergenic (‑775/+26) | algD/PP_1289 | GDP‑mannose 6‑dehydrogenase/DUF328 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (56/44); new base G (5/6); total (61/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.20e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
AAAAAAGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATGCGCTGCTGG > NC_002947/1474856‑1475148 | aaaaaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGTAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAg > 1:2429398/1‑150 (MQ=255)aaaaaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAg > 1:1957956/1‑150 (MQ=255) aaaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGTCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑cc > 1:994044/1‑150 (MQ=255) aaaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑cc > 2:331168/1‑150 (MQ=255) aaaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑cc > 1:1551154/1‑150 (MQ=255) aaaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAAAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑Ccg > 1:2935072/1‑150 (MQ=255) aaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCtt < 2:2671267/143‑1 (MQ=255) aaGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCtt > 1:2671267/1‑143 (MQ=255) aTGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGCCCTCTTCGCGGCTGAAG‑CCGCGAaga < 1:1100730/150‑1 (MQ=255) aTGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAaga < 1:1255107/150‑1 (MQ=255) aTGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTGAAG‑CCGCGAaga < 2:2842707/150‑1 (MQ=255) tGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTGAAG‑CCGCGAagag < 2:1648263/150‑1 (MQ=255) tGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGGGAGGTGATGTCCGTTTCCTGCGTGCCCTGTTGCAGGGCAGAGGCGGATCATGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAagag < 1:1752579/150‑1 (MQ=255) gAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGAGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAgg < 1:2850166/150‑1 (MQ=255) aaCGGTCTTATGGCGTTTGGCGATAAAGTTAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTG‑CCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGc > 1:2093189/1‑150 (MQ=255) aCGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGc < 2:1957956/150‑1 (MQ=255) gTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTGAAG‑CCGCGAagag < 2:1015716/144‑1 (MQ=255) gTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTGAAG‑CCGCGAagag > 1:1015716/1‑144 (MQ=255) tGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGc > 1:1478983/1‑150 (MQ=255) tGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGc > 2:2615777/1‑150 (MQ=255) gCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACCCcgc > 1:1130473/1‑150 (MQ=255) gATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCgg < 1:2735687/150‑1 (MQ=255) gATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCgg > 2:2735687/1‑150 (MQ=255) aTAAAGGGAGGTGCGACGGATTTTTTTTTTTTTTTTCGTGGCGTGATGGCGGTTTGCAGCGTGCCTTGTTGCAGGGCAGAGGCGGATCACGGCTGCTGACCTCTTCGCGGCTTCAG‑CCGCGCAGAGGGCGTGACTGGCTCACTCCGCggg > 2:1282804/1‑150 (MQ=255) aTAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCggg > 2:1702705/1‑150 (MQ=255) aTAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCggg < 2:2429398/150‑1 (MQ=255) aTAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACCCCGCgga < 2:1130473/150‑2 (MQ=255) aTAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAAAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCggg < 2:2935072/150‑1 (MQ=255) aGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGa < 1:1167195/150‑1 (MQ=255) ggAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAgg > 2:13787/1‑121 (MQ=255) ggAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATc < 2:2625554/150‑1 (MQ=255) tGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCa < 2:1365285/150‑1 (MQ=255) gACGGATTTTTTGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGa > 2:156467/1‑150 (MQ=255) aCGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAgg < 1:1620527/122‑1 (MQ=255) aCGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAgg > 2:1620527/1‑122 (MQ=255) aCGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGaa > 1:2356486/1‑150 (MQ=255) tttGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCaaa > 2:776537/1‑150 (MQ=255) tttGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCaaa < 1:331168/150‑1 (MQ=255) tttGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCaaa < 1:1702705/150‑1 (MQ=255) tGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATg < 1:2615777/150‑1 (MQ=255) tCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTg > 2:306583/1‑150 (MQ=255) ggATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGc < 1:776537/150‑1 (MQ=255) ggATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGc > 2:119901/1‑150 (MQ=255) ggATTCGTGGCGTGATGCCCCGGTGCAGCGTGCCCTGTTGCAGGGCAGAGGCAGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGc < 1:2460699/150‑1 (MQ=255) gATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCGCTCCGCGGGGTGATCGCGCAGGaa > 2:2097018/1‑133 (MQ=255) aTTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCtt > 2:2281137/1‑150 (MQ=255) gCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTc < 1:818710/100‑1 (MQ=255) gCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTc > 2:818710/1‑100 (MQ=255) tGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAgg > 2:98051/1‑81 (MQ=255) tGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAgg < 1:98051/81‑1 (MQ=255) tGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACCACGGTGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCa > 1:187684/1‑150 (MQ=255) ggCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCAc < 1:306583/150‑1 (MQ=255) gTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgta > 2:3025523/1‑150 (MQ=255) tttGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgtag < 1:2281137/150‑1 (MQ=255) cAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCt < 2:1395118/126‑1 (MQ=255) cAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCt > 1:1395118/1‑126 (MQ=255) gCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTAc < 1:510566/150‑1 (MQ=255) cGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTGAAG‑CCGCGAAGAgg < 1:2428551/68‑1 (MQ=37) ccTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGa > 2:496717/1‑150 (MQ=255) cTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACAGCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACACCTGAg > 1:1830229/1‑150 (MQ=255) tGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATc > 1:2882653/1‑150 (MQ=255) gCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCg > 2:1058657/1‑150 (MQ=255) gCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCg > 1:1247740/1‑150 (MQ=255) gCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGAGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCg > 1:2381276/1‑150 (MQ=255) ggCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGAc < 2:409772/113‑1 (MQ=255) ggCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGAc > 1:409772/1‑113 (MQ=255) gCAGAGGCGGATCACGGCGGCTGACCTCTTCGAGGCTTCCGTTCAAGCCG‑TTTCTTGACAGGCTCACTCCTCAGTGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCGCTGTAGTAGTACCCCTGAAGATCggaaga > 1:2833517/1‑145 (MQ=255) cAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGc > 2:881725/1‑150 (MQ=255) ggCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGa < 1:3025523/150‑1 (MQ=255) gCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAg > 1:1271482/1‑150 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGAc > 2:532369/1‑51 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGAc < 1:532369/51‑1 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgt > 2:567326/1‑117 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgt < 1:567326/117‑1 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGa < 1:1996207/131‑1 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGa > 2:1996207/1‑131 (MQ=255) ggATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCt > 2:1903282/1‑150 (MQ=255) gATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgtag < 1:1408803/118‑1 (MQ=255) gATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTgtag > 2:1408803/1‑118 (MQ=255) gATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGAGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTg > 1:786871/1‑150 (MQ=255) ggcggcTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTTCGCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCgg < 2:3049018/150‑1 (MQ=255) gcTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATcgcg > 2:1750525/1‑65 (MQ=255) gcTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATcgcg < 1:1750525/65‑1 (MQ=255) gcTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTg < 1:119901/150‑1 (MQ=255) tGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATAGAACTGATTGAGCTGTTACGGTGTGCt > 2:2478320/1‑150 (MQ=255) tGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACCGAAGTAGTACCCGTTAGCATCGAACTGCTTGCGCCGTTCCGGGGTGCt > 2:2805144/1‑150 (MQ=255) ccTCTTCGCGGCTGAAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAg > 2:797300/1‑132 (MQ=255) tctTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACAcc < 1:1948708/68‑1 (MQ=255) tctTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTg < 2:1967142/98‑1 (MQ=255) tctTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTg > 1:1967142/1‑98 (MQ=255) tctTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACACCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATgc < 2:2093189/150‑1 (MQ=255) tctTCGCGGCTGAAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATgc > 2:325799/1‑150 (MQ=255) tctTCGCGGCTGAAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATgc > 2:1861665/1‑150 (MQ=255) ttCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATgcgc > 1:2439621/1‑150 (MQ=255) ttCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATgcgc > 2:193880/1‑150 (MQ=255) tCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATGCgct < 1:881725/150‑1 (MQ=255) cgcgGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATTGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCggg < 2:1477679/136‑1 (MQ=255) cgcgGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATTGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCggg > 1:1477679/1‑136 (MQ=255) ggCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATGCGctgctg > 2:142945/1‑150 (MQ=255) gCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATGCGCTGCTgg > 2:196156/1‑150 (MQ=255) | AAAAAAGGTATGAACGGTCTTATGGCGTTTGGCGATAAAGGGAGGTGCGACGGATTTTTGGCGTCGGATTCGTGGCGTGATGGCGGTTTGCAGCGTGCCCTGTTGCAGGGCAGAGGCGGATCACGGCGGCTGACCTCTTCGCGGCTTCAG‑CCGCGAAGAGGGCGTGACAGGCTCACTCCGCGGGGTGATCGCGCAGGAACACCAAATGGTCTGGCTTGGACTGCTCGGCACTGTAGTAGTACCCCTGAGCATCGAACTGCTTGAGCTGTTCCGGGGTGCTGATGCGCTGCTGG > NC_002947/1474856‑1475148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |