| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,526,613 | G→T | 6.1% | C253F (TGC→TTC) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,526,613 | 0 | G | T | 6.1% | 478.4 / 10.7 | 148 | C253F (TGC→TTC) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| Reads supporting (aligned to +/- strand): ref base G (71/68); new base T (6/3); total (77/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.53e-01 | |||||||||||
Only 100 of 152 total aligned reads displayed.
CAGGTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTC > NC_002947/1526465‑1526761 | gTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGAt > 1:2110485/1‑150 (MQ=255) tcgccgATCTGCCTGCGGACGGAGGCCGTGTTCTACGAAGATGAAGCCAAGTACAGCGTAAACGATACCCAGCACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt < 2:504948/149‑1 (MQ=255) ccgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 1:765966/1‑150 (MQ=255) ccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGc < 2:1609289/150‑1 (MQ=255) aTCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATc < 1:2161415/150‑1 (MQ=255) gCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGaa < 1:2268679/150‑1 (MQ=255) cccTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAg > 1:2299000/1‑150 (MQ=255) tGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCt > 2:2861096/1‑150 (MQ=255) gggTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGcg > 1:1290874/1‑149 (MQ=38) gTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTggg < 2:2219935/150‑1 (MQ=255) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGCCCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCg > 2:224835/1‑150 (MQ=255) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTCATCGACCTGCCCGCGCGC‑GCCTGCAATGCCATTGGCATCGAAGGCTGGGGGCg > 1:2476727/1‑150 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGAGATGCCATTGGCATCGAAGGCTGGGGGCgg < 1:2861096/150‑1 (MQ=255) gcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCGCAg > 1:1384899/1‑137 (MQ=255) cGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGa < 2:2110485/150‑1 (MQ=255) tgtTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTTCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAATGGCATCGAAGGCTGGGGGCGGTTGGACg > 1:2357071/1‑150 (MQ=255) cTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGAt < 1:2080216/150‑1 (MQ=255) tACGACTATGACGCCAATTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATCGTCGCGCAGG‑ACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg < 1:1724679/150‑1 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt < 1:2142889/117‑1 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 2:2142889/1‑117 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg > 2:1153425/1‑150 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg > 1:64735/1‑150 (MQ=255) caCGACTATGACGTCAACTACATCGTCAACGATACCCAGTACCGCATCGCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg < 2:2476727/149‑1 (MQ=255) gACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAg > 2:1700901/1‑150 (MQ=255) tATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGAc > 2:700017/1‑150 (MQ=255) tGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGa > 2:127435/1‑150 (MQ=255) aCGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc < 2:2413123/150‑1 (MQ=255) cGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCa > 2:143469/1‑150 (MQ=255) cAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAggg > 1:2912005/1‑150 (MQ=255) aaGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCgg > 2:2860044/1‑123 (MQ=255) aaGTACATCGTCAACGATACCCAGTACCGCAACCCGTGCGGGCTGGATAG‑CGTCAAGCAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc < 2:1112501/150‑1 (MQ=255) aGTACATCGTCAACGATACACAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGAGC‑GCATGCGATGCTAGTGTCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGAGGAGCAGGGcc > 1:1897181/1‑150 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc < 2:2340474/139‑1 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc > 2:979333/1‑144 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc < 1:979333/144‑1 (MQ=255) gTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTgg < 1:1511163/150‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAATTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgc < 1:31147/150‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTTACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc < 2:123250/146‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAgg > 2:589697/1‑103 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAgg < 1:589697/103‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCa > 1:832327/1‑127 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCa < 2:832327/127‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGAAGGGCCAGTTCTGgc > 2:2521586/1‑150 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGCGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgc > 2:2323716/1‑150 (MQ=255) aCGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTg < 2:2269078/79‑1 (MQ=255) aCGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgctgc < 1:1234204/150‑1 (MQ=255) cGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgctgct > 1:2129462/1‑150 (MQ=255) aTACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc > 1:999141/1‑129 (MQ=255) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca > 1:2788174/1‑89 (MQ=39) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca < 2:2788174/91‑3 (MQ=39) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGt > 1:2056336/1‑150 (MQ=255) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCCCCCAGCCTTCGATGCCaat > 2:705658/1‑81 (MQ=37) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCCCCCAGCCTTCGATGCCaat < 1:705658/83‑3 (MQ=37) cAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGc < 2:2284708/115‑1 (MQ=255) cAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGc > 1:2284708/1‑115 (MQ=255) cAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTc < 1:2265572/150‑1 (MQ=255) gTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCaa < 1:1030299/150‑1 (MQ=255) tACCGCATCCCGTGCGGGCTTGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTgg < 2:105161/93‑1 (MQ=255) gCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCt > 1:15427/1‑129 (MQ=255) cATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCgg > 2:1716997/1‑94 (MQ=255) cATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCgg < 1:1716997/94‑1 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCa > 2:1912066/1‑150 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCa < 1:143469/150‑1 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCa > 1:1928788/1‑150 (MQ=255) gTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAgg < 2:2618698/150‑1 (MQ=255) tGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGc < 1:2850917/150‑1 (MQ=255) gggCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATg < 1:2448673/150‑1 (MQ=255) tGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGc > 2:1850457/1‑71 (MQ=255) tGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGc < 1:1850457/71‑1 (MQ=255) gATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGAt > 2:389095/1‑150 (MQ=255) aTAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg < 2:1352897/138‑1 (MQ=255) tAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCa > 2:2558548/1‑150 (MQ=255) gTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc < 1:389095/150‑1 (MQ=255) gTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc > 2:1997412/1‑150 (MQ=255) gTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc > 1:1096587/1‑150 (MQ=255) gTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGCGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc < 1:2323716/150‑1 (MQ=255) tCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg < 1:2278326/117‑1 (MQ=255) cAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCt < 1:2734709/150‑1 (MQ=255) aaGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTg > 1:2653320/1‑150 (MQ=255) ggaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCGATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg < 2:2140952/128‑1 (MQ=255) ggaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGt < 1:1165639/150‑1 (MQ=255) aggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCa > 2:2658954/1‑150 (MQ=255) tGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcgg > 2:1624702/1‑150 (MQ=255) tGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcgg > 2:251180/1‑150 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg > 2:3071224/1‑150 (MQ=255) cTGAGCGGGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCg > 2:2906483/1‑150 (MQ=255) cTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGtt > 1:4040/1‑80 (MQ=255) tGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGa < 2:353931/114‑1 (MQ=255) tGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGa > 1:353931/1‑114 (MQ=255) gACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGcc < 1:199530/74‑1 (MQ=255) gACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCa > 2:2743675/1‑120 (MQ=255) ccGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTg < 1:251180/150‑1 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTgg < 1:1032900/150‑1 (MQ=255) cgcgc‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGcc < 2:1928788/150‑1 (MQ=255) ccagcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGt < 2:2266841/67‑1 (MQ=255) ccTTCGATGCCAATGGCATCGCAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACt > 2:183828/1‑150 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGt > 2:1475301/1‑133 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc < 2:2299000/150‑1 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc < 1:224835/150‑1 (MQ=255) gCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 2:80864/1‑42 (MQ=255) | CAGGTGCTGCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTC > NC_002947/1526465‑1526761 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |