| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,526,622 | T→A | 6.1% | I256N (ATT→AAT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,526,622 | 0 | T | A | 6.1% | 442.9 / 14.9 | 144 | I256N (ATT→AAT) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| Reads supporting (aligned to +/- strand): ref base T (67/67); new base A (7/2); total (75/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.35e-01 | |||||||||||
Only 100 of 149 total aligned reads displayed.
CCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACT > NC_002947/1526474‑1526769 | tcgccgATCTGCCTGCGGACGGAGGCCGTGTTCTACGAAGATGAAGCCAAGTACAGCGTAAACGATACCCAGCACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt < 2:504948/149‑1 (MQ=255)ccgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 1:765966/1‑150 (MQ=255) cgccgATCGCCCTGGGTACGCCGCACGTGTTTTACTACTATGACGCCAAGTACATCGTAAACGATACCCAGTACCGCATCCCGTGCTGCCTGTATAG‑CTTCCACGAACAGTAAGTGATCGACCTGACCGAGCGC‑GCCTGCGATGCCATTg < 2:1130666/150‑1 (MQ=255) gCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGaa < 1:2268679/150‑1 (MQ=255) tGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCt > 2:2861096/1‑150 (MQ=255) gggTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATGGCATCGCAGGcg > 1:1290874/1‑149 (MQ=38) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGCCCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCg > 2:224835/1‑150 (MQ=255) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTCATCGACCTGCCCGCGCGC‑GCCTGCAATGCCATTGGCATCGAAGGCTGGGGGCg > 1:2476727/1‑150 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGAGATGCCATTGGCATCGAAGGCTGGGGGCgg < 1:2861096/150‑1 (MQ=255) gcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCGCAg < 2:1384899/137‑1 (MQ=255) cACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTg < 1:2044986/150‑1 (MQ=255) cGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGa < 2:2110485/150‑1 (MQ=255) gtgtTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGAc < 1:168811/150‑1 (MQ=255) tCTACGACTATGACGCAAAGTACCTCGTCAACGATGGACAGTAGCGCACCCCGAGCGGTCGTTAGAG‑CGTCAAGGAACAGGAACTTATGGACCTGAGAGAGCGG‑GACTGCGATGACATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 2:31147/1‑150 (MQ=255) cTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGAt < 1:2080216/150‑1 (MQ=255) tACGACTATGACGCCAATTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATCGTCGCGCAGG‑ACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg < 1:1724679/150‑1 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 2:2142889/1‑117 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt < 1:2142889/117‑1 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg > 1:64735/1‑150 (MQ=255) caCGACTATGACGTCAACTACATCGTCAACGATACCCAGTACCGCATCGCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg < 2:2476727/149‑1 (MQ=255) tATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGAc > 2:1030299/1‑150 (MQ=255) tATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGAc > 2:700017/1‑150 (MQ=255) aCGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc < 2:2413123/150‑1 (MQ=255) aCGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc < 2:2674947/150‑1 (MQ=255) cGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCCATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCa < 1:1914089/150‑1 (MQ=255) cAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAggg > 1:2912005/1‑150 (MQ=255) aaGTACATCGTCAACGATACCCAGTACCGCAACCCGTGCGGGCTGGATAG‑CGTCAAGCAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc < 2:1112501/150‑1 (MQ=255) aGTACATCGTCAACGATACACAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGAGC‑GCATGCGATGCTAGTGTCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGAGGAGCAGGGcc > 1:1897181/1‑150 (MQ=255) gTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGGACTGAGCGACCTGACAGCGCGC‑GCCTGCGATGCCCTTGGCATCGAAGTCTTGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCg < 1:700017/150‑1 (MQ=255) tACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCAGCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGccag > 1:2203212/1‑148 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc < 2:2340474/139‑1 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc > 1:2340474/1‑139 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc > 2:979333/1‑144 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCg > 1:2287203/1‑146 (MQ=255) aTCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc > 2:1234204/1‑150 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAATTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgc < 1:31147/150‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTTACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc < 2:123250/146‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTTACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTc > 1:123250/1‑146 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAgg < 1:589697/103‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCa > 1:832327/1‑127 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCa < 2:832327/127‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGAAGGGCCAGTTCTGgc > 2:2521586/1‑150 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGCGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgc > 2:2323716/1‑150 (MQ=255) aTACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGc > 1:999141/1‑129 (MQ=255) cccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg < 1:992059/150‑1 (MQ=255) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca < 2:2788174/91‑3 (MQ=39) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgca > 1:2788174/1‑89 (MQ=39) ccAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGt > 2:2265572/1‑150 (MQ=255) cAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGc < 2:2284708/115‑1 (MQ=255) cAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGc > 1:2284708/1‑115 (MQ=255) aGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCa > 2:2850917/1‑150 (MQ=255) aGTACCGAATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCa > 2:897937/1‑150 (MQ=255) gTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCaa < 1:1030299/150‑1 (MQ=255) tACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTgg > 1:105161/1‑93 (MQ=255) gCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCt < 2:15427/129‑1 (MQ=255) gCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCt > 1:15427/1‑129 (MQ=255) cATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCgg > 2:1716997/1‑94 (MQ=255) cccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCAcc > 2:2149744/1‑150 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCa < 1:143469/150‑1 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCAGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAacac < 1:1804882/143‑1 (MQ=255) ccGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCAGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAacac > 2:1804882/1‑143 (MQ=255) tGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGc < 1:2850917/150‑1 (MQ=255) gggCTGGATAG‑CGTCAAGGAACAGGACCTGATCGACGTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATg > 1:2100397/1‑150 (MQ=255) gggCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATg < 1:2448673/150‑1 (MQ=255) tGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGc > 2:1850457/1‑71 (MQ=255) gATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGAt < 2:2129462/150‑1 (MQ=255) aTAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg < 2:1352897/138‑1 (MQ=255) aTAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg > 1:1352897/1‑138 (MQ=255) tAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCa > 2:2558548/1‑150 (MQ=255) gTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGCGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGc < 1:2323716/150‑1 (MQ=255) tCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAg > 2:2278326/1‑117 (MQ=255) cAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCt < 1:2734709/150‑1 (MQ=255) aaGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTg > 1:2653320/1‑150 (MQ=255) ggaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCGATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAg > 1:2140952/1‑128 (MQ=255) ggaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGt < 1:1165639/150‑1 (MQ=255) gaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTg > 1:447147/1‑150 (MQ=255) aggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCa > 2:2658954/1‑150 (MQ=255) tGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcgg > 2:1624702/1‑150 (MQ=255) tGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcgg > 2:251180/1‑150 (MQ=255) cTGAGCGGGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCg > 2:2906483/1‑150 (MQ=255) cTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGtt < 2:4040/80‑1 (MQ=255) cTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGtt > 1:4040/1‑80 (MQ=255) tGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGa < 2:353931/114‑1 (MQ=255) tGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGa > 1:353931/1‑114 (MQ=255) gACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGcc < 1:199530/74‑1 (MQ=255) gACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGcc > 2:199530/1‑74 (MQ=255) ccGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTg < 1:251180/150‑1 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTgg < 1:1032900/150‑1 (MQ=255) cgcgc‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGcc < 2:1928788/150‑1 (MQ=255) ccagcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGt > 1:2266841/4‑70 (MQ=255) gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGAc < 2:1897181/150‑1 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGt < 1:1475301/133‑1 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGt > 2:1475301/1‑133 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCAATGGCGGCCCGTGCGGCTGGCCTGGACtt > 2:654962/1‑150 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc < 1:224835/150‑1 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc < 2:2299000/150‑1 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc > 2:1630969/1‑150 (MQ=255) gCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 2:80864/1‑42 (MQ=255) cGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCa < 1:897937/150‑1 (MQ=255) tGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGaa < 1:2447155/73‑1 (MQ=255) | CCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAG‑CGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGCTGCTCGAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACT > NC_002947/1526474‑1526769 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |