| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,598,879 | C→T | 7.4% | intergenic (‑76/+55) | dctB ← / ← bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,598,879 | 0 | C | T | 7.4% | 283.7 / 5.6 | 100 | intergenic (‑76/+55) | dctB/bglX | C4‑dicarboxylate transport sensor protein/beta‑D‑glucoside glucohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (41/51); new base T (3/5); total (44/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTG > NC_002947/1598732‑1599026 | gcTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCAc < 1:1032850/150‑1 (MQ=255) cTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCAcc > 1:286791/1‑150 (MQ=255) tGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCt < 2:813979/150‑1 (MQ=255) gAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGTATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTg < 1:1334339/150‑1 (MQ=255) aGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGt < 2:2632600/150‑1 (MQ=255) gCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAgg < 2:779195/150‑1 (MQ=255) gTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGgcgc < 1:1191210/150‑1 (MQ=255) gTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGgcgc < 2:2168219/150‑1 (MQ=255) cccAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGt > 1:1926260/1‑150 (MQ=255) ccAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGtt < 1:1517611/150‑1 (MQ=255) cAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGttt < 1:502827/150‑1 (MQ=255) gCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTa > 2:905749/1‑150 (MQ=255) gCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTa < 1:905749/150‑1 (MQ=255) gCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTa > 1:20543/1‑150 (MQ=255) cACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTAc < 2:2377600/150‑1 (MQ=255) cACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAAACCGCGCCTACAGGTGCT‑GCAGAGTACCTGTAGGCGCGGGTTTAc < 2:2047669/150‑1 (MQ=25) cACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGCCGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTAc < 1:32510/150‑1 (MQ=255) agcagGGTGATCAGCCCAAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGaa > 2:196711/1‑150 (MQ=255) gcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCcgc > 2:1481005/1‑146 (MQ=255) gcagGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCcgc < 1:1481005/146‑1 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTg > 2:1254407/1‑123 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTg < 1:1254407/123‑1 (MQ=255) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAAACCGCGCCTACAGGTGCT‑GCAGAGTACCTGTAGGCGCGGGTTTAc < 1:2126977/138‑1 (MQ=21) ggTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAAACCGCGCCTACAGGTGCT‑GCAGAGTACCTGTAGGCGCGGGTTTAc > 2:2126977/1‑138 (MQ=21) atctaTCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGAGCCGGTGGTGGGATGTCGGGGCCGGCCGTTTCGCGGGTAAAACCGCGCCTACAGGTGCTGCAG‑AGTACCTGTAGGCGCGGGTTTACCCGCGAAGAGGc < 1:2647845/146‑1 (MQ=17) gTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCCGTACCTCTAGGCGCCGTTGCACCCGCGAAACGGcc < 2:1579752/150‑1 (MQ=255) gTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGcc < 2:112286/150‑1 (MQ=255) tGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAGGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGATAAACCCGCGCCGCCAGGTACG‑CTCCAGCACCTGTAGGCCACGTTGTACCCGCTGAGAGGCCg > 2:1087194/1‑150 (MQ=255) tCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCGGCCTTTTCGCGGGTAAAACCGCGCCGATAGGTGCT‑GCGGAGTACTTGTAGGCGCGGGTTTACCCGCGAAGAGGcaagat > 2:2647845/1‑145 (MQ=18) ggcAGGCGCAGGGCGCGAAAGGGAAGGGGCATCGGGGGCGGTTCCGGTGGTGGGTGGGCGGGGCCTGCCGCGGCGCGGGTAGCCCCGCGCCTACAGGTACT‑CTGCAGCAGCTGTAGGCGGGGTTGCACCCGCGAAAAGGCCGGAACAggc < 2:2976516/148‑1 (MQ=255) cccAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGTGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCCGTTTTACCCGCGAAAAGGCCGGATCAggc < 2:1060293/150‑1 (MQ=255) aGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGGGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCttttt < 1:196711/150‑1 (MQ=255) gggCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTc > 1:2755391/1‑150 (MQ=255) ggCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGGCTACAGGTACT‑CTGCAGCACCTGTTGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 1:2534205/150‑1 (MQ=255) ggCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 1:2801601/150‑1 (MQ=255) gAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCaa > 1:2469698/1‑150 (MQ=255) aaaGGAAAAGGGCATCGGGGGCGGATTCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGATCCT‑CTGCACCACCTGTCGGCCCGGTTCTACACGCGAAAAGGCCGTGACAGACTGCTGTTTTCAGTCaaa < 2:2339917/150‑1 (MQ=255) aaaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCg < 2:2054078/125‑1 (MQ=255) aaaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCg > 1:2054078/1‑125 (MQ=255) aaaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCaaa < 2:2755391/150‑1 (MQ=255) aaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAg < 2:629901/150‑1 (MQ=255) aaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAA‑CCGCGCCTACAGGTGCTGCAG‑AGTACCTGTAGGCGCgggt > 1:2076275/1‑103 (MQ=18) aaGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAA‑CCGCGCCTACAGGTGCT‑GCAGAGTACCTGTAGGCGCgggt < 2:2076275/105‑3 (MQ=18) gAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 1:2909028/140‑1 (MQ=255) gAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa > 2:2909028/1‑140 (MQ=255) aaaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAt > 1:348846/1‑150 (MQ=255) aaaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAt > 1:1948902/1‑150 (MQ=255) aaaGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAAtt < 1:3056478/150‑1 (MQ=255) gCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAg < 2:2088855/150‑1 (MQ=255) aTCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCAGCATTTTTCAGTCTAATCAATTAAAAGct > 1:2162285/1‑150 (MQ=38) tCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGctc < 1:2498005/150‑1 (MQ=255) tCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGccc < 2:1926260/150‑3 (MQ=255) gggggCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctg < 2:286791/150‑1 (MQ=255) gggCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAgg > 2:2113330/1‑114 (MQ=255) gggCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAgg < 1:2113330/114‑1 (MQ=255) gtggGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTTCT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 1:1337133/150‑1 (MQ=255) gtggGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg > 1:662796/1‑150 (MQ=255) ggATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa < 1:300679/150‑1 (MQ=255) ggATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa < 2:109438/150‑1 (MQ=255) ggATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCAGGTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa > 1:898703/1‑150 (MQ=255) aTGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAg > 1:1008/1‑124 (MQ=255) aTGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAg < 2:1008/124‑1 (MQ=255) ggggCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGcc > 1:869020/1‑150 (MQ=255) ggggCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCCTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGcc > 2:890285/1‑150 (MQ=255) gcctCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTg < 2:1948902/150‑1 (MQ=255) gcctCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTg < 2:20543/150‑1 (MQ=255) cctCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTgg > 1:2953374/1‑150 (MQ=255) ctctTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCAc < 2:15883/42‑1 (MQ=255) ctctTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCAc > 1:15883/1‑42 (MQ=255) tctTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg < 1:890728/130‑1 (MQ=255) tctTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTgg > 2:890728/1‑130 (MQ=255) gTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTc > 2:1235446/1‑150 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAg > 2:2386173/1‑84 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAg < 1:2386173/84‑1 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctgc < 1:1380570/100‑1 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTctgc > 2:1380570/1‑100 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTAcc < 1:2739008/130‑1 (MQ=255) ccGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTAcc > 2:2739008/1‑130 (MQ=255) gcgcCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa > 2:1552267/1‑75 (MQ=255) gcgcCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 1:1552267/75‑1 (MQ=255) gcgcCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTg > 1:2714498/1‑112 (MQ=255) gcgcCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTg < 2:2714498/112‑1 (MQ=255) ccTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCgg < 2:746041/150‑1 (MQ=255) ctccAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACTGCCTGGCAATCCAGCCGTACCTGGACATTGAACTCCCCTGGTTCGGc > 2:1373673/4‑150 (MQ=255) tACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCa > 2:101795/1‑150 (MQ=255) aGGTACT‑CTACAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAAcc > 2:706099/1‑150 (MQ=255) gTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa > 2:341331/1‑106 (MQ=255) gTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGaa < 1:341331/106‑1 (MQ=255) gTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGa < 2:2193152/122‑1 (MQ=255) gTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGa > 1:2193152/1‑122 (MQ=255) gTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCg > 2:2325714/1‑150 (MQ=255) ct‑ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGctc > 2:2069158/1‑82 (MQ=255) ct‑ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGctc < 1:2069158/82‑1 (MQ=255) t‑ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGc > 2:1504019/1‑150 (MQ=255) ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCgg < 2:2712342/138‑1 (MQ=255) ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCgg > 1:2712342/1‑138 (MQ=255) ctGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCa > 2:2036811/1‑150 (MQ=255) tGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa < 2:2188321/59‑1 (MQ=255) tGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCa > 1:2188321/1‑59 (MQ=255) agcaCCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTg > 1:1720533/1‑150 (MQ=255) | GCTGAGTGCGGTACCCAGCACGATCAGCAGGGTGATCAGCCCCAGACGCAGGGCGCGAAAGGAAAAGGGCATCGGGGGCGGATCCGGTGGTGGGATGTCGGGGCCTGCCTCTTCGCGGGTAAACCCGCGCCTACAGGTACT‑CTGCAGCACCTGTAGGCGCGGTTTTACCCGCGAAAAGGCCGGAACAGGCGGCCTTTTTCAGTCAAAGCAATTCAAAGCTCTGCTGCTGCACCGCCTGGGAATCCAGCCCTACCTGGACATTGAACTCCCCTGGTTCGGCAACCCGCTGCAACTG > NC_002947/1598732‑1599026 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |