| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,629,498 | A→C | 5.8% | *322Y (TAA→TAC) | mucB → | sigma factor AlgU regulator MucB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,629,498 | 0 | A | C | 5.8% | 343.6 / 12.7 | 121 | *322Y (TAA→TAC) | mucB | sigma factor AlgU regulator MucB |
| Reads supporting (aligned to +/- strand): ref base A (57/57); new base C (4/3); total (61/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.31e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
ACCCAGCTAGGCCCGACCTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAGGGGTCTTTC > NC_002947/1629349‑1629644 | ccAGCTAGGCCCGACCTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATg > 1:2623771/1‑150 (MQ=255) aGCTAGGCCCGACCTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTTGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGgc < 2:2737476/150‑1 (MQ=255) ccGACCTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCtttt > 1:625360/1‑150 (MQ=255) cTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCATTACTGgcgcgcctgg > 2:1962983/1‑141 (MQ=255) cTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCATTACTGgcgcgcctgg < 1:1962983/145‑5 (MQ=255) cTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTg < 2:843758/150‑1 (MQ=255) gCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGa > 1:1471810/1‑150 (MQ=255) cAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGGAATGGCGCGCTTTTGCGTGCCGAg > 1:200218/1‑150 (MQ=255) aGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGTTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCANGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGc < 1:2414311/150‑1 (MQ=255) tctcGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCa > 1:105580/1‑150 (MQ=255) tcGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAg < 1:1552771/150‑1 (MQ=255) tcGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAg < 1:338648/150‑1 (MQ=255) cgcgTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAgg < 2:786009/150‑1 (MQ=255) tCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGTTGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAgg > 2:1351990/1‑150 (MQ=255) gCCTGAATACACCCAAGGGCACAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTg < 2:1580019/150‑1 (MQ=255) gCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTg > 1:2693279/1‑150 (MQ=255) aaTACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAAt < 2:3047463/112‑1 (MQ=255) aaTACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAAt > 1:3047463/1‑112 (MQ=255) aaTACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCCGGTGGGCAt > 2:1224606/1‑150 (MQ=255) aaTACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCAt > 1:704755/1‑150 (MQ=255) acCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCaa > 1:1183859/1‑132 (MQ=255) acCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCACCGGCGAGATGCCCAGGCGCGCCAGTAATGGCGCACTTTCGCCTGCTCAAACATGATAGGTGGGCATACGcc > 1:677580/1‑150 (MQ=255) cccAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCt < 2:625360/150‑1 (MQ=255) ccAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGc > 2:2609700/1‑147 (MQ=255) ccAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtg > 1:2285859/1‑150 (MQ=255) ccAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtg > 2:1336961/1‑150 (MQ=255) ccAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAACTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGACCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATAAGCCtg > 1:2980005/1‑150 (MQ=255) aaGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGTAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGcc < 2:2617018/121‑1 (MQ=255) aaGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGTAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGcc > 1:2617018/1‑121 (MQ=255) aGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaa < 1:3010025/150‑1 (MQ=255) gggCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaat < 2:704755/150‑1 (MQ=255) cAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAg < 2:3032086/128‑1 (MQ=255) cAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaatgaa < 2:2623771/150‑1 (MQ=255) aaaGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaatgaaa < 1:2719526/150‑1 (MQ=255) aaaGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaatgaaa < 1:1209917/150‑1 (MQ=255) aaaGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaatgaaa > 1:2711967/1‑150 (MQ=255) tGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAAt < 2:1316587/93‑1 (MQ=255) gATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTaaa < 2:2285859/150‑1 (MQ=255) ggTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCa < 2:200218/150‑1 (MQ=255) gTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAAtt < 1:233644/143‑1 (MQ=255) gTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAAtt > 2:233644/1‑143 (MQ=255) gACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTg < 1:336671/150‑1 (MQ=255) cGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCAtt > 1:2113882/1‑146 (MQ=255) tGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCa < 2:2693279/150‑1 (MQ=255) cGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGAAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATc < 1:1850013/150‑1 (MQ=255) gAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCAtt < 2:2082519/136‑1 (MQ=255) gAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCAtt > 1:2082519/1‑136 (MQ=255) gAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATcc > 1:1080802/1‑150 (MQ=255) gAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATcc > 1:1924111/1‑150 (MQ=255) aaTTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCGTTTGCAATCCAt > 1:294031/1‑150 (MQ=255) aaTTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCAt < 1:1224606/150‑1 (MQ=255) aTTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATc > 2:1146752/1‑150 (MQ=255) tACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTc > 1:907473/1‑150 (MQ=255) cGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCta < 2:1924111/150‑1 (MQ=255) ggCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCtat > 2:2784763/1‑150 (MQ=255) gCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCtata > 2:1830810/1‑150 (MQ=255) cAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAg < 1:900273/150‑1 (MQ=255) cAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAg > 1:1547079/1‑150 (MQ=255) cGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCttt < 2:1547079/150‑1 (MQ=255) tgcTGGCGATGCGCCCCCAGGATCCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGa > 2:767935/3‑150 (MQ=255) cccTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCttt < 2:2121569/148‑1 (MQ=255) cccTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCttt > 1:2121569/1‑148 (MQ=255) cccTGTCGATGCGCCCCCAGGACGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGACATGAACTTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATACGTCAGGCtttta < 2:2418899/150‑3 (MQ=255) tGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCa < 2:174791/76‑1 (MQ=255) tGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCa > 1:174791/1‑76 (MQ=255) tGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAaga > 1:2951092/1‑150 (MQ=255) gTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAagag > 2:770056/1‑150 (MQ=255) gATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCt > 1:1685035/1‑150 (MQ=255) gATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCt > 1:2176743/1‑150 (MQ=255) aTGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCAt < 2:2408610/113‑1 (MQ=255) aTGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTg < 2:2711967/150‑1 (MQ=255) aTGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTATATTGAGCGGGCTGGGTAGAGCCTg < 2:3051032/150‑1 (MQ=255) tGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaat < 2:2420923/82‑1 (MQ=255) tGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCtgaaat > 1:2420923/1‑82 (MQ=255) gcgcCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGc < 2:2131114/150‑1 (MQ=255) tcccccAGGATGCCGAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCTGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTCTACGTCAGCCTTTGAACATCCttgtct < 2:677580/149‑6 (MQ=255) ccccAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTg > 1:41170/1‑99 (MQ=255) ccccAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTg < 2:41170/99‑1 (MQ=255) ccccAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCttt > 1:1370367/1‑150 (MQ=255) cccAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCtttt > 1:3046902/1‑150 (MQ=255) aTGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGt < 2:1370367/150‑1 (MQ=255) tGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGtt < 1:1434942/150‑1 (MQ=255) tGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGtt < 2:2980005/150‑1 (MQ=255) cccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTc > 2:544365/1‑109 (MQ=255) cccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTc < 1:544365/109‑1 (MQ=255) cccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTtgt < 2:1080802/150‑1 (MQ=255) ccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTg > 1:1893048/1‑81 (MQ=255) ccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTtgtg > 2:3066760/1‑150 (MQ=255) ccAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTCGGCATACGCCTGAAATGAAATTAAAGCATTg < 2:1893048/81‑1 (MQ=255) aagcgcgcCATTACTGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCCTACTCGTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCa > 2:2574179/3‑150 (MQ=255) aagcgcgcCATTACTGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATc > 1:2494065/3‑95 (MQ=255) aagcgcgcCATTACTGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATc < 2:2494065/93‑1 (MQ=255) aGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTACAATATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCa < 2:105580/150‑1 (MQ=255) ggCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTtgtg < 2:2388113/147‑1 (MQ=255) ggCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTtgtg > 1:2388113/1‑147 (MQ=255) agcgcgcCATTACTGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTgaaatgaaat < 1:2372356/67‑1 (MQ=38) gcgcCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAgggg > 1:21063/1‑150 (MQ=255) gcgcCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATACATCGGCAAATTTTCTATAGGTCAGGGTTTGAAGAGCCTGGCCTTTTCTGCGTTGAGAAgggg > 1:1529942/1‑150 (MQ=255) gcCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAGGGGTc > 1:2417413/1‑150 (MQ=255) gTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAGGGGTCTTTc < 1:1336961/150‑1 (MQ=255) | ACCCAGCTAGGCCCGACCTCGGCAGTCTCGCGTCGCCTGAATACACCCAAGGGCAAAGTGATGGTGACCGTGGTTGGCGAAATTCCGCTGGGTACGGCAGAACGCGTCGCCCTGTCGATGCGCCCCCAGGATGCCCAGGCGCGCCAGTAATGGCGCGCTTTTGCGTGCCGAGCCAAGGCAGGTGGGCATACGCCTGAAATGAAATTAAAGCATTGTCATTTGCAATCCATCGGCAAATTTTCTATAGGTCAGGCTTTGAAGAGCCTGGCCTTTTCTGCGTTGTGCAGGGGTCTTTC > NC_002947/1629349‑1629644 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |