| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,715,144 | G→A | 5.0% | E16E (GAG→GAA) | PP_1510 → | carboxyvinyl‑carboxyphosphonate phosphorylmutase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,715,144 | 0 | G | A | 5.0% | 420.7 / 7.7 | 139 | E16E (GAG→GAA) | PP_1510 | carboxyvinyl‑carboxyphosphonate phosphorylmutase |
| Reads supporting (aligned to +/- strand): ref base G (62/69); new base A (3/4); total (65/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
CACGCCTGCCGGGCCTGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGAAGGCGCCTTGAGC > NC_002947/1714995‑1715288 | gCCGGGCCTGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACg < 2:1747413/150‑1 (MQ=255) cGGGCCTGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGgc < 2:544490/150‑1 (MQ=255) ctagCACCTTTGGCGGAATTTCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGtt < 2:1242647/147‑1 (MQ=255) cTGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTcgcgct > 1:1952877/1‑148 (MQ=255) tGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGGTGAGTCCTTCAAGGCGGTACACGAGCGCGACGGCGCGTTc > 1:1242647/1‑150 (MQ=255) tGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTc < 1:2187058/150‑1 (MQ=255) gCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTCGCGCTCGt < 1:2749630/150‑1 (MQ=255) cTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATc < 2:1910948/150‑1 (MQ=255) gttGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATcc > 2:644955/2‑150 (MQ=255) ttGCCGGAATTGCCGCGCGCCCCTGAGGTCTAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATccc < 1:644955/150‑1 (MQ=255) cGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAAc > 2:1275945/1‑150 (MQ=255) gAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAAccc < 2:2509908/150‑1 (MQ=255) ttGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTg < 1:960723/150‑1 (MQ=255) cccTGAGGTCGAACACTTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACAATGGATGTGCAAACACTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCt > 2:442443/1‑150 (MQ=255) cccTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCt > 1:582323/1‑150 (MQ=255) cccTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTCGCGCTCGt < 2:825156/124‑1 (MQ=255) cccTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTCGCGCTCGt > 1:825156/1‑124 (MQ=255) ccatGAGGTAGAACAAGTGGGGCTACACTTACCTGTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCAACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCt > 2:1724954/4‑150 (MQ=255) gTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCaa < 2:1305350/150‑1 (MQ=255) tCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAg > 2:2678090/1‑150 (MQ=255) gAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGtt > 1:729333/1‑150 (MQ=255) aaTTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTc > 1:1902254/1‑150 (MQ=255) ttGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCACGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGc < 2:2890943/150‑1 (MQ=255) ggggCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCa > 2:404823/1‑150 (MQ=255) gCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGcc > 2:597366/1‑150 (MQ=255) cTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCt < 1:1316317/150‑1 (MQ=255) cTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCt > 1:2099079/1‑150 (MQ=255) tACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTg < 1:404823/150‑1 (MQ=255) aCTCTGACCTTTCCCTGACTGCCGGAACTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTgg < 1:2008483/150‑1 (MQ=255) tctGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGt > 2:204876/1‑150 (MQ=255) tGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGttt < 1:1432623/150‑1 (MQ=255) tGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCAAGCCTGGGttt > 1:2773403/1‑150 (MQ=255) ccTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGa < 2:1146713/150‑1 (MQ=255) cTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAg < 1:1716934/150‑1 (MQ=255) cTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAg > 1:329222/1‑150 (MQ=255) tCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACgg > 2:1201875/1‑80 (MQ=255) ccTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACt < 1:1997942/150‑1 (MQ=255) ccTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACt > 1:2484013/1‑150 (MQ=255) cTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTCGCGCTCGt < 2:2915102/86‑1 (MQ=255) cTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAACGCGCCGTCGCGCTCGt > 1:2915102/1‑86 (MQ=255) aCTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCt < 2:2099079/150‑1 (MQ=255) tGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTac > 1:2633603/1‑150 (MQ=255) tGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTac < 1:204876/150‑1 (MQ=255) ccGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTacca < 2:1386513/150‑1 (MQ=255) cGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTaccac > 2:480825/1‑150 (MQ=255) ggAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTaccacc > 2:2683460/1‑150 (MQ=255) ggAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTaccacc > 1:1063202/1‑150 (MQ=255) ggAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTaccacc > 1:267961/1‑150 (MQ=255) ggTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTac > 2:1975225/1‑143 (MQ=255) gTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGgc < 2:2804187/65‑1 (MQ=255) gTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGgc > 1:2804187/1‑65 (MQ=255) gTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTg < 2:1927013/150‑1 (MQ=255) aaCCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAgg > 2:1089857/1‑150 (MQ=255) aCCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGTGGCACTGGCTACCACCAGTGCAggc < 1:847832/150‑1 (MQ=255) ccATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAggcc > 2:252275/1‑150 (MQ=255) ccATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAggcc > 2:317398/1‑150 (MQ=255) cATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATcc < 1:544818/71‑1 (MQ=255) cATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATcc > 2:544818/1‑71 (MQ=255) cATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTg > 1:2286071/1‑103 (MQ=255) aTGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAggcctg > 1:1206363/1‑150 (MQ=255) aTGGATGTGCAAACCCTGCCAGCTGAGGCCTTCAAGGCGTCACACGAGCGCGACGGCGCGTTCGCCATCCCCCACCCGCGGGATGCCGGCTCCGCCCAGTTGNTCGCCAGCCTCGGTTTCGAGGCACTGGCTACCACCAGTGCAggcctg < 1:1087944/150‑1 (MQ=255) ggATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAGCCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAggcctggc < 2:729333/150‑1 (MQ=255) tgCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCa < 2:2484013/150‑1 (MQ=255) tgCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCa > 1:1901382/1‑150 (MQ=255) aaCCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCg < 2:476251/77‑1 (MQ=255) aaCCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCg > 1:476251/1‑77 (MQ=255) aCCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTg < 1:453083/150‑1 (MQ=255) cccTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTgg < 1:340241/150‑1 (MQ=255) cTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGggc > 1:2711923/1‑150 (MQ=255) gAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGggccggc < 1:252275/150‑1 (MQ=255) gCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGgccggccg > 2:2777383/1‑150 (MQ=255) tGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAgg > 1:2463077/1‑101 (MQ=255) tGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAgg < 2:2463077/101‑1 (MQ=255) tGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCtt < 2:262811/132‑1 (MQ=255) gAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGAc < 1:1807863/150‑1 (MQ=255) aGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTgg < 2:50012/56‑1 (MQ=255) aGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTgg > 1:50012/1‑56 (MQ=255) gCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTgg > 1:1961694/1‑54 (MQ=255) gCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTgg < 2:1961694/54‑1 (MQ=255) gCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGcc < 2:2711923/150‑1 (MQ=255) cTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAg > 2:1690970/1‑94 (MQ=255) cTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAg < 1:1690970/94‑1 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGTTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTc > 2:15370/1‑126 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGTTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTc < 1:15370/126‑1 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTc < 1:316921/62‑1 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTc > 2:316921/1‑62 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCt > 1:2549254/1‑74 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTacca < 2:2621832/106‑1 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTacca > 1:2621832/1‑106 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa > 1:154118/1‑150 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa > 2:2863737/1‑150 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa > 1:1160497/1‑150 (MQ=255) ttCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa > 1:1018588/1‑150 (MQ=255) ggCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGAAGgcgc > 2:1090021/1‑150 (MQ=255) gTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTg < 1:1508022/124‑1 (MQ=255) gTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTg > 2:1508022/1‑124 (MQ=255) gTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCATGGCCTTCAGCCTGGGCCGGCCGGACGCCGAAGGCgcctt < 2:1361940/150‑1 (MQ=255) tACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGAAGGCgccttga < 1:1090021/150‑1 (MQ=255) gcgcGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa > 2:2259799/1‑133 (MQ=255) gcgcGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGaa < 1:2259799/133‑1 (MQ=255) | CACGCCTGCCGGGCCTGGCACCTTTGCCGGAATTGCCGCGCGCCCCTGAGGTCGAACAATTGGGGCTACTCTGACCTTTCCCTGACTGCCGGAGGTTGAACCATGGATGTGCAAACCCTGCGAGCTGAGGCCTTCAAGGCGTTACACGAGCGCGACGGCGCGTTCGTCATCCCCAACCCGTGGGATGCCGGCTCCGCCAAGTTGCTCGCCAGCCTGGGTTTCGAGGCACTGGCTACCACCAGTGCAGGCCTGGCCTTCAGCCTGGGCCGGCCGGACGCCGAAGGCGCCTTGAGC > NC_002947/1714995‑1715288 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |