BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,948,216	C→G	5.7%	R494R (CGG→CGC)	PP_1749 ←	acetyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,948,216	0	C	G	5.7%	341.2 / 10.1	106	R494R (CGG→CGC)	PP_1749	acetyltransferase
Reads supporting (aligned to +/- strand): ref base C (55/45); new base G (3/3); total (58/48)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.21e-01

Only 100 of 113 total aligned reads displayed.

CCCGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACT  >  NC_002947/1948072‑1948364

cccGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGCCGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCGGTGCGCCGCAc                                                                                                                                                 >  2:1356232/1‑150 (MQ=255)

  cGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACgg                                                                                                                                               >  2:2234581/1‑150 (MQ=255)

      aTCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAg                                                                                                                                           <  1:1776989/150‑1 (MQ=255)

         aCGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCa                                                                                                                                            >  2:455165/1‑146 (MQ=255)

         aCGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCa                                                                                                                                            <  1:455165/146‑1 (MQ=255)

         aCGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGgcg                                                                                                                                        >  2:23542/1‑150 (MQ=255)

                aTGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGGCGCACGGCCaa                                                                                                                                           <  2:1610671/140‑2 (MQ=255)

                aTGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGGCGCACGGCCaa                                                                                                                                           >  1:1610671/1‑139 (MQ=255)

                aTGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccg                                                                                                                                 <  1:2344146/150‑1 (MQ=255)

                aTGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccg                                                                                                                                 >  1:9502/1‑150 (MQ=255)

                 tGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccg                                                                                                                                 <  1:1258040/149‑1 (MQ=255)

                 tGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccg                                                                                                                                 >  2:1258040/1‑149 (MQ=255)

                   aaGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccggcc                                                                                                                              <  2:2614454/150‑1 (MQ=255)

                     gTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGccggccgg                                                                                                                            <  1:345812/150‑1 (MQ=255)

                      tCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCcggccggc                                                                                                                           <  1:2649143/150‑1 (MQ=255)

                      tCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCcggccggc                                                                                                                           >  2:2741678/1‑150 (MQ=255)

                        cAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCAACGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCaa                                                                                                                         <  2:1925548/150‑1 (MQ=255)

                             ccaccaCCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgt                                                                                                                    <  1:397642/150‑1 (MQ=255)

                                    cGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                             <  2:1860844/150‑1 (MQ=255)

                                    cGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATa                                                                                                             >  1:433444/1‑150 (MQ=255)

                                      gAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGc                                                                                                           <  1:2234581/150‑1 (MQ=255)

                                      gAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCACCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGc                                                                                                           <  1:1203834/150‑1 (MQ=255)

                                           tCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACg                                                                                                      <  1:2645766/150‑1 (MQ=255)

                                              ggTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGccc                                                                                                   <  2:1586714/149‑1 (MQ=255)

                                              aGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGGCGCACGGCCaac                                                                                                                                          >  1:1659518/1‑109 (MQ=255)

                                              aGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGccc                                                                                                   <  2:1191747/150‑1 (MQ=255)

                                               gTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCg                                                                                                  >  1:2761925/1‑150 (MQ=255)

                                               gTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTAAAGGGTGCCGCCGCTGTGCAGGTTGCCCGTACTCCTGACGTCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCg                                                                                                  >  2:346289/1‑150 (MQ=255)

                                                tGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGc                                                                                                 >  2:2230698/1‑150 (MQ=255)

                                                tGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGCCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGc                                                                                                 <  1:2168605/150‑1 (MQ=255)

                                                   ccGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgc                                                                                              >  1:2897340/1‑150 (MQ=255)

                                                    cGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcg                                                                                             >  1:2799/1‑150 (MQ=255)

                                                              gcACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtc                                                                                                                   <  2:310535/118‑1 (MQ=255)

                                                              gcACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACAcgtc                                                                                                                   >  1:310535/1‑118 (MQ=255)

                                                                  ggCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTc                                                                               <  2:9502/150‑1 (MQ=255)

                                                                   gcagcaTCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCg                                                                              >  2:1566834/1‑150 (MQ=255)

                                                                       cgaacgCCTGCACCCGGTGCTGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGtttt                                                                          >  2:819258/6‑150 (MQ=255)

                                                                         tCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcg                                                                        >  2:1721669/1‑150 (MQ=255)

                                                                         tCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcg                                                                        <  2:2720661/150‑1 (MQ=255)

                                                                         tCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcg                                                                        <  1:1091540/150‑1 (MQ=255)

                                                                         tCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGCCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcg                                                                        >  2:1407016/1‑150 (MQ=255)

                                                                          acgcctgCACCCGGTGCTGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCgg                                                                             <  1:1359577/138‑1 (MQ=255)

                                                                          acgcctgCACCCGGTGCTGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCgg                                                                             >  2:1359577/7‑144 (MQ=255)

                                                                            gCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtcg                                                                     >  1:1323129/1‑150 (MQ=255)

                                                                             ccAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTcgtcgt                                                                    >  1:2221263/1‑150 (MQ=255)

                                                                                gCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCa                                                                 >  1:612557/1‑150 (MQ=255)

                                                                                 cACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAg                                                                >  1:1686417/1‑150 (MQ=255)

                                                                                  aCCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGc                                                               <  2:1323129/150‑1 (MQ=255)

                                                                                    cGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCgg                                                             >  2:2287693/1‑150 (MQ=255)

                                                                                    cGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGCCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCgg                                                             >  2:344487/1‑150 (MQ=255)

                                                                                          cAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcg                                                                                             >  1:2058916/1‑112 (MQ=255)

                                                                                          cAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTgcg                                                                                             <  2:2058916/112‑1 (MQ=255)

                                                                                           aGGCGTTCGGTTACGTCCGCCAGGGTGCCGCCGGTGTGTAGCTTGGCCGGGCGCCGCACTGCCAGGCGCTGGCGGGCCGGCAACACGTCGTCATAGCTACCGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGGCCTCCGGTGGAATGCgg                                                      >  2:958407/1‑150 (MQ=255)

                                                                                           aGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCgg                                                      >  1:623953/1‑150 (MQ=255)

                                                                                              cGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCAGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGctc                                                   >  2:268351/1‑150 (MQ=255)

                                                                                               gTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGctct                                                  >  1:1521928/1‑150 (MQ=255)

                                                                                                ttCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCtctc                                                 <  2:433444/150‑1 (MQ=255)

                                                                                                  cGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGc                                               <  1:21847/150‑1 (MQ=255)

                                                                                                    gTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtc                                                                         >  2:1405931/1‑122 (MQ=255)

                                                                                                    gTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtc                                                                         <  1:1405931/122‑1 (MQ=255)

                                                                                                           cctccAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTgg                                      <  2:2897340/150‑1 (MQ=255)

                                                                                                            ctccAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGc                                     >  2:75965/1‑150 (MQ=255)

                                                                                                            ctccAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGc                                     >  2:323598/1‑150 (MQ=255)

                                                                                                             tccAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCa                                    >  1:349324/1‑150 (MQ=255)

                                                                                                               cAGGGTGCCGCAGGTGTGCAGGCTGGCCGTCCGCCGCACGGCCAGGCGCTGGCCGGCAGGCAACACGTCGGCATATCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGCCAAGCGGCACGCGGCTCTCCCCACCGGTGGCAGc                                  >  2:1260647/1‑150 (MQ=255)

                                                                                                                aGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGcgaga                                 <  1:260270/150‑5 (MQ=255)

                                                                                                                 gggTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCt                                <  1:2287693/150‑1 (MQ=255)

                                                                                                                    tGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGc                             <  1:1566834/150‑1 (MQ=255)

                                                                                                                    tGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGc                             <  1:2388134/150‑1 (MQ=255)

                                                                                                                        gccgGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGaa                                                           >  2:961594/1‑116 (MQ=255)

                                                                                                                        gccgGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGaa                                                           <  1:961594/116‑1 (MQ=255)

                                                                                                                        gccgGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGt                                        <  1:2764234/135‑1 (MQ=255)

                                                                                                                        gccgGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGt                                        >  2:2764234/1‑135 (MQ=255)

                                                                                                                         ccgGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGa                        >  1:1283319/1‑150 (MQ=255)

                                                                                                                              gtgCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccggcc                                                                                                                              >  2:478838/1‑43 (MQ=255)

                                                                                                                              gtgCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTggccggcc                                                                                                                              <  1:478838/43‑1 (MQ=255)

                                                                                                                                 cAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTg                >  1:387100/1‑150 (MQ=255)

                                                                                                                                  aGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGTCCTgc               <  2:2297774/150‑1 (MQ=255)

                                                                                                                                  aGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTgc               >  1:1830458/1‑150 (MQ=255)

                                                                                                                                  aGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTgc               >  1:1831358/1‑150 (MQ=255)

                                                                                                                                   ggTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                      >  1:2390431/1‑94 (MQ=255)

                                                                                                                                    gTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTgcgc             >  1:1045831/1‑150 (MQ=255)

                                                                                                                                     ttGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCtctc                                                 <  2:2759943/113‑1 (MQ=255)

                                                                                                                                     ctGGCCGTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                      >  1:229074/2‑92 (MQ=255)

                                                                                                                                     ctGGCCGTGCGGCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTtcgtc                                                                      <  2:229074/91‑1 (MQ=255)

                                                                                                                                       ggCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTc          <  1:288146/150‑1 (MQ=255)

                                                                                                                                       ggCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTc          <  2:1686417/150‑1 (MQ=255)

                                                                                                                                         ccGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCgg                                                      <  1:932323/104‑1 (MQ=255)

                                                                                                                                         ccGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCgg                                                      >  2:932323/1‑104 (MQ=255)

                                                                                                                                         ccGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCCCTCGCCCCCGGTGGCAGCGTGGCGTCGACGGCTCTGCGCTTCGa        >  2:26733/1‑150 (MQ=255)

                                                                                                                                          cGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGTTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGAt       <  1:819258/150‑1 (MQ=255)

                                                                                                                                           gTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATc      >  1:2690/1‑150 (MQ=255)

                                                                                                                                            tGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCa     >  2:2248012/1‑150 (MQ=255)

                                                                                                                                             gcgcCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCaa    <  2:1831358/150‑1 (MQ=255)

                                                                                                                                              cgccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTACAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAAc   >  2:2718402/1‑150 (MQ=255)

                                                                                                                                               gccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACt  >  2:1967986/1‑150 (MQ=255)

                                                                                                                                                ccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGtt                                                                           >  1:907204/1‑76 (MQ=255)

                                                                                                                                                ccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGtt                                                                           <  2:907204/76‑1 (MQ=255)

                                                                                                                                                ccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGc                                                        <  1:2114643/95‑1 (MQ=255)

                                                                                                                                                ccgcACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGc                                                        >  2:2114643/1‑95 (MQ=255)

CCCGGCATCACGCACCATGAAGTCCAGCCCCACCACCGGAATTTCCAGTGCCCGTGCCGCGCGCACGGCAGCATCGGCCAGCACCGGGTGCAGGCGTTCGGTGACGTCCTCCAGGGTGCCGCCGGTGTGCAGGTTGGCCGTGCGCCGCACGGCCAGGCGCTGGCCGGCCGGCAACACGTCGTCATAGCCAACGCCCGCTGCGCGCAAGGTGCGCTCGGTTTCGTCGTCCAGCGGAATGCGGCTCTCGCCACCGGTGGCAGCCTGGCGTCGACGGCTCTGCGCTTCGATCAACT  >  NC_002947/1948072‑1948364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`