| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,068,195 | A→T | 7.1% | intergenic (‑97/+24) | plsC ← / ← PP_1845 | 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,068,195 | 0 | A | T | 7.1% | 284.9 / 9.6 | 95 | intergenic (‑97/+24) | plsC/PP_1845 | 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein |
| Reads supporting (aligned to +/- strand): ref base A (40/48); new base T (4/3); total (44/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCGG > NC_002947/2068046‑2068343 | ccAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCaa < 2:433850/150‑1 (MQ=255) aaCGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGc < 2:2682450/150‑1 (MQ=255) ggCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTCCGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCcg < 1:668584/150‑1 (MQ=255) gCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCcgc < 1:1383108/150‑1 (MQ=255) cAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCcgcg > 2:1176952/1‑150 (MQ=255) aaGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGa < 2:2619745/150‑1 (MQ=255) gAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCTTGCCCGCGaaa < 1:734522/150‑1 (MQ=255) gAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGaaa < 1:1621342/150‑1 (MQ=255) aaaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGaaaa < 1:1783961/150‑1 (MQ=255) aaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTTCGCGGGCTTGCCCGCGaaag < 1:1159222/150‑2 (MQ=255) aTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTAGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAggg < 1:433186/150‑1 (MQ=255) tGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGc < 1:1619815/150‑1 (MQ=255) tGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGGGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGc < 2:2626348/150‑1 (MQ=255) gCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg > 1:2792039/1‑147 (MQ=255) gCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg < 2:2792039/147‑1 (MQ=255) gCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTT‑GGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGACCGCGAAAAGGGGCCgg > 1:2218731/1‑149 (MQ=255) aCATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg > 2:1487018/1‑132 (MQ=255) aCATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg < 1:1487018/132‑1 (MQ=255) cATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAat < 1:1176952/150‑1 (MQ=255) cATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTATTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAat < 2:1090973/150‑1 (MQ=255) gCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGACGTGGCCC‑TTTCGCGGGCAAGCCCGCGGAAAGGGCCCGTGCGGCTAGCCAATAtgct > 1:31665/1‑150 (MQ=255) aaTGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg < 1:943287/124‑1 (MQ=255) aaTGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAgg > 2:943287/1‑124 (MQ=255) aaTGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctgc > 1:404236/1‑150 (MQ=255) aTGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAata < 1:1369220/143‑1 (MQ=255) aTGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAata > 2:1369220/1‑143 (MQ=255) gAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGa < 1:3062031/150‑1 (MQ=255) aaTAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGAt > 1:1563199/1‑150 (MQ=255) aTAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATc < 1:154516/150‑1 (MQ=255) tAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg > 1:2045418/1‑143 (MQ=255) tAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg < 2:2045418/143‑1 (MQ=255) gTACGACTCACACCAGACAGTCGCGGGTCAGTGTACGGGTG‑TGCACTCGCTGGCGCAAACTTTGGTGTAGGCCTGTTACGGCCA‑TTTCGCGAGAAAGCCCGCTAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCGGAACAAACTCGATc < 2:1058799/150‑1 (MQ=255) tACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCg > 2:2992487/1‑150 (MQ=255) cGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGCTGC‑CTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGcc < 1:809044/150‑1 (MQ=255) cgtaaaacCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCtt < 2:1450728/144‑1 (MQ=255) tCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGt > 1:502399/1‑150 (MQ=255) tCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGt > 1:1233332/1‑150 (MQ=255) ccAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAgc < 2:1563199/150‑1 (MQ=255) ccAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAgc > 1:2389267/1‑150 (MQ=255) ccAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGACCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAgc < 1:1754491/150‑1 (MQ=255) aCGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTa > 2:1438443/1‑106 (MQ=255) aCGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTa < 1:1438443/106‑1 (MQ=255) gggtgggggggAAGTGAACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTAACGGCAA‑ATTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTATCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTc < 2:632320/143‑1 (MQ=255) gTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCca < 2:1233332/150‑1 (MQ=255) gcgGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCCGCTCGATCGCCTTGTCCAGCG‑CCTCcagca < 2:1725448/150‑1 (MQ=255) gcgGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACC‑TGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGa < 1:1562406/115‑1 (MQ=255) gcgGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACC‑TGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGa > 2:1562406/1‑115 (MQ=255) tgtACGGGTG‑TGCACTGGCTGGGGCAACCCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCTTTTTGCGGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTgc < 1:534444/150‑1 (MQ=255) aCGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTa < 1:984663/88‑1 (MQ=255) aCGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTa > 2:984663/1‑88 (MQ=255) gtg‑tGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACttt < 2:404236/150‑1 (MQ=255) gtg‑tGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACttt > 2:2418447/1‑150 (MQ=255) aCTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTg > 2:413868/1‑136 (MQ=255) aCTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTg < 1:413868/136‑1 (MQ=255) aCTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCtt < 2:2389267/150‑1 (MQ=255) aCTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCACACTTTCAGCtt > 1:2125975/1‑150 (MQ=255) cgggctggGGCAAACCTTGGTGCCGGCATGTTACGGCCC‑TTTCGCGTGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg < 2:502399/148‑1 (MQ=255) tggGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGtt < 1:374009/150‑1 (MQ=255) tggGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGtt > 2:374009/1‑150 (MQ=255) tggGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGtt > 1:230008/1‑150 (MQ=255) gCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTtg > 1:2127571/1‑150 (MQ=255) aCCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCTGCTAGCCAATATGCTGCTGATCCAGGTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTgcg > 1:243011/1‑150 (MQ=255) aCCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTgcg > 1:244066/1‑150 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg > 2:1899830/1‑74 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg < 1:1899830/74‑1 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTTAACAG‑CCTCCAGCAGCCCTGTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc > 2:82269/1‑150 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg > 1:750699/1‑135 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg < 2:750699/135‑1 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc > 1:3038869/1‑150 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc > 1:1704761/1‑150 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGAATTAT‑GGGCGCCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc > 2:81276/1‑150 (MQ=255) cTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCACGTGCAGCTAGCCAATCTGCGGTCGAACCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc > 1:2675535/1‑150 (MQ=255) ggCCTGTTACGGCCC‑GTTCGCGGGCAAGCCCGCGAAAAGGGCCGGTGCGGCCAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTc > 2:886194/1‑150 (MQ=255) gCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGa < 1:760713/68‑1 (MQ=255) gCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGa > 2:760713/1‑68 (MQ=255) ccTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGGCTGTTCAg > 1:635650/1‑150 (MQ=255) cTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCACACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGc < 2:2125975/150‑1 (MQ=255) ttACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAATGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGcttc > 1:228473/1‑150 (MQ=255) tACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGcttct < 2:3038869/150‑1 (MQ=255) aCGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTTTTCTTGTGCGCCAGCATGTTCAGcttctt < 1:81276/150‑1 (MQ=255) aCGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTTTTCTTGTGCGCCAGCATGTTCAGcttctt < 1:82269/150‑1 (MQ=255) gggCCCTTTTCGCGGGCTTGCCCGCGAAAGGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCCTGTCCCCAG‑TCGCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGACATTGTGCGAAAGGATGTTCTGcttctt > 1:189862/2‑150 (MQ=255) ggCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCa < 2:2675535/150‑1 (MQ=255) ggCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCa < 2:2218731/150‑1 (MQ=255) ggCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCa < 2:2127571/150‑1 (MQ=255) ggCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCACCTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCa < 1:78811/150‑1 (MQ=255) gcccttttCGCGGGCTTGCCCGCG‑AAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAg > 1:1172635/6‑150 (MQ=255) ccttttCGCGGGCTTGCCCGCG‑AAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCt > 1:1288291/4‑150 (MQ=255) ttttCGCGGGCTTGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTgc < 2:260600/123‑1 (MQ=255) ttttCGCGGGCTTGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTgc > 1:260600/2‑124 (MQ=255) tttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg > 1:1805132/1‑111 (MQ=255) tttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg < 2:1805132/111‑1 (MQ=255) gcgGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGc < 2:847520/134‑1 (MQ=255) gcgGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGc > 1:847520/1‑134 (MQ=255) gcgGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCcgcg > 2:2737771/1‑150 (MQ=255) gcgGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCcgcg > 1:2275777/1‑150 (MQ=255) aaGCCCGCGAAAATGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCgg < 2:228473/150‑1 (MQ=255) | CCAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTG‑TGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCC‑TTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCG‑CCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCGG > NC_002947/2068046‑2068343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |