| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,470 | T→A | 5.7% | intergenic (+73/+18) | deaD → / ← ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,470 | 0 | T | A | 5.7% | 419.5 / 10.7 | 139 | intergenic (+73/+18) | deaD/ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (60/71); new base A (4/4); total (64/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 143 total aligned reads displayed.
GAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCA > NC_002947/2092322‑2092618 | gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGACAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTg > 2:1773115/1‑150 (MQ=255) gctgctGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGccc < 1:2232706/150‑1 (MQ=255) gctgctGTCCAAGCTCAAAGACTCTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACTAAAAATTCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGccc < 2:1269661/150‑1 (MQ=255) tgctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCGAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc > 1:1605190/1‑150 (MQ=255) tgctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc < 1:1235966/150‑1 (MQ=255) tgctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgc > 2:1680931/1‑150 (MQ=255) gctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCCTTCGCGGGCAAGCCcgcg > 1:427268/1‑150 (MQ=255) tgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGaa > 2:1115254/1‑150 (MQ=255) tgTCAAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCGTTTCGCGGGCTTGCCTGCGaa > 2:1115304/1‑150 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTGGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAaga > 1:2474281/1‑150 (MQ=255) ccAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAagag < 1:1759993/150‑1 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg > 2:1907376/1‑150 (MQ=255) cAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCCTTCGCGGGCAAGCCCGCGaaaggg < 2:427268/150‑5 (MQ=255) aaGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGc > 2:2728351/1‑150 (MQ=255) gCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCTCTTCGCGGGCAAGCCCGCGaaagggccg < 1:1520840/150‑8 (MQ=255) tCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCtt > 2:1558617/1‑150 (MQ=255) tCAAGGACACTCGCGTGGCAGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGCAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGGTTGCCCGCGCAGAGGCCCtt > 1:577754/1‑150 (MQ=255) aacgACTCTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTCCGCGGGCTTGCCCGCTAAGAGGCCCTT‑Ca < 2:778678/147‑1 (MQ=255) aGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCTTTTCGCGGGCTTGCCCGCGACGAGGCCCTT‑CAg > 2:513583/1‑150 (MQ=255) aGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGaaagggc < 2:26446/143‑6 (MQ=255) ggACACTCGCGTGGCTGGCGAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTTACCCTGGCTTAACCAAAAAATCCCCGGCTTAGGTCGGCGATTGTTTCTACCTGTACCTGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGt < 2:1408872/150‑1 (MQ=255) ggACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGt < 1:2671947/150‑1 (MQ=255) ggACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGt < 2:472615/150‑1 (MQ=255) ggACACTCGCGTGGATGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGt < 2:2544978/150‑1 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCTGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGaa > 2:2371849/1‑150 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGaa > 1:1417936/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 2:2287350/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 1:2991929/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 1:1012545/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 2:918731/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 1:1981158/1‑150 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 1:2467858/1‑150 (MQ=255) gcgTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCCTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGa < 2:1893529/150‑1 (MQ=255) tggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAagag > 1:35352/1‑129 (MQ=255) tggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAagag < 2:35352/129‑1 (MQ=255) tggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAg < 1:1773115/150‑1 (MQ=255) ggctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGa < 2:2730964/150‑1 (MQ=255) gctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGAt < 2:365333/150‑1 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTTATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGt < 1:10016/150‑1 (MQ=255) tggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGt > 2:64222/1‑150 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTcc < 2:2564520/150‑1 (MQ=255) aaGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGc < 1:2577935/123‑1 (MQ=255) agcagcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATc < 2:2748740/150‑1 (MQ=255) cagcTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATccc < 1:73446/150‑1 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAg > 1:1093482/1‑150 (MQ=255) tGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGTCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAgc < 1:3005427/150‑1 (MQ=255) gCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTGGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAgcgcgc < 2:2474281/150‑1 (MQ=255) cTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTAACTGGACCGGCCCTTGCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGcc < 1:1907376/150‑1 (MQ=255) tGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCTCTTCGCGGGCAAGCCCGCGaaagggc > 1:635948/1‑105 (MQ=37) cGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAg > 1:2914710/1‑150 (MQ=255) gTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGAACAgg > 2:849589/1‑150 (MQ=255) gcgAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAcccc < 1:2728351/150‑1 (MQ=255) gcgAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAcccc > 1:126306/1‑150 (MQ=255) aTTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc < 2:926670/106‑1 (MQ=255) aTTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAAcc > 1:926670/1‑106 (MQ=255) aTCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcacca > 1:2197760/1‑150 (MQ=255) tCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcaccac < 2:1093482/150‑1 (MQ=255) ccTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACg < 1:64222/150‑1 (MQ=255) cTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATATCTGTTCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGc > 1:1570171/1‑150 (MQ=255) cGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGaa < 2:1611552/150‑1 (MQ=255) tAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCTGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACt > 2:220523/1‑150 (MQ=255) tAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGa > 2:1523631/1‑134 (MQ=255) tAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGa < 1:1523631/134‑1 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCt > 1:1901345/1‑150 (MQ=255) gAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCAAACCGATAGATGTTCCACCCCAGCACTCTCAGGGTAAACCCCTGATGCACCACTCCGAACTTGCt > 1:808289/1‑150 (MQ=255) aaaaaaTCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTc > 1:2888413/1‑150 (MQ=255) aTCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGc < 1:1115254/150‑1 (MQ=255) aTCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGc < 1:90408/150‑1 (MQ=255) ccctGGCGTAGATCGCGGATTTTTAAAACCTGAGCCGGCCCTGTCCCGGGCTTGCCCTCGAAGATTCCCTG‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGccc < 2:577754/150‑1 (MQ=255) ccGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCa > 1:984897/1‑150 (MQ=255) ccGGCTTAGGTCGGGGATTTTTTTTACCTGTACCCGAAAATTC‑CGGGGTTGGCCGGGCGACGGTTCTTCCGGTCGAACCGATAGATATCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCa > 1:56546/1‑150 (MQ=255) cGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 2:2992786/150‑1 (MQ=255) cGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 1:1030751/150‑1 (MQ=255) cGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 2:2994622/150‑1 (MQ=255) gCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCTTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAgg < 1:513583/150‑1 (MQ=255) aGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGTCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCaa < 1:849589/150‑1 (MQ=255) gTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 1:2586410/142‑1 (MQ=255) gTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa > 2:2586410/1‑142 (MQ=255) ggggATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAc > 2:681247/1‑102 (MQ=255) aTTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTcc < 2:3036332/126‑1 (MQ=255) tttttttACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGgc < 2:1981158/150‑1 (MQ=255) ttttttACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGgca < 2:2467858/150‑1 (MQ=255) tACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCaaa < 1:2287350/150‑1 (MQ=255) ccTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATg < 2:2197760/150‑1 (MQ=255) cTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAcccc > 1:2543076/1‑90 (MQ=255) cTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGc > 1:322914/1‑150 (MQ=255) cGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCtcatca < 2:1683365/150‑1 (MQ=255) gCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCa > 1:2172123/1‑71 (MQ=255) gCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCa < 2:2172123/71‑1 (MQ=255) gCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCGCCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACt < 2:2559570/150‑1 (MQ=255) cccTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTg < 2:2914710/150‑1 (MQ=255) ccTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTgg > 2:3046008/1‑150 (MQ=255) tcttCGCGGGCAAGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACACGGGATGAACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTggg > 1:2831341/3‑150 (MQ=255) tttCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAAc < 2:601441/123‑1 (MQ=255) gcgGGCAAGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGt > 1:697669/1‑150 (MQ=255) cgGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGtt < 2:56546/150‑1 (MQ=255) cgGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGtt < 1:3046008/150‑1 (MQ=255) ttGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCGCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCa > 2:403262/1‑150 (MQ=255) ttGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCa < 2:2888443/150‑1 (MQ=255) ttGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCa < 2:322914/150‑1 (MQ=255) | GAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGATTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTT‑CAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCAAAGAACAGCGGCAGCAAATGCTCATCACTGGGATGGTTACGCA > NC_002947/2092322‑2092618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |