| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,109,062 | A→T | 5.1% | I104N (ATT→AAT) | PP_1881 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,109,062 | 0 | A | T | 5.1% | 475.9 / 10.7 | 151 | I104N (ATT→AAT) | PP_1881 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (72/71); new base T (4/4); total (76/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
GTGTGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGCG > NC_002947/2108914‑2109206 | gtgtGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAAt > 2:1299639/1‑150 (MQ=255) taaaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc < 1:265276/149‑1 (MQ=255) aaaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGccc > 1:1337156/1‑150 (MQ=255) aaaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCAGTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGccc > 1:1158542/1‑150 (MQ=255) tCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGttt > 2:1344445/1‑150 (MQ=255) gCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGgtg > 1:2757940/1‑145 (MQ=255) gCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTc > 1:1202436/1‑150 (MQ=255) ccTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCgg > 1:1004599/1‑150 (MQ=255) gtgGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGcc > 1:2210611/1‑150 (MQ=255) gTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCTACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGt > 1:807761/1‑150 (MQ=255) tCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTc > 1:622004/1‑150 (MQ=255) tCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTc > 1:2659373/1‑150 (MQ=255) gACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCaa < 2:957887/150‑1 (MQ=255) ccAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAgg > 2:1546704/1‑150 (MQ=255) ccAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAgg < 2:710916/150‑1 (MQ=255) ccAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGACTGGGCAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAgg > 2:1962658/1‑150 (MQ=255) cGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACt < 2:738911/150‑1 (MQ=255) gCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAg > 2:402549/1‑150 (MQ=255) tCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTa > 2:1827902/1‑150 (MQ=255) cacaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGtccc < 1:886749/150‑4 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc < 1:2877922/104‑1 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc > 2:2877922/1‑104 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGttt < 2:270723/116‑1 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGaa < 2:610280/136‑1 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAg < 1:696813/142‑1 (MQ=255) acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACg > 1:1283237/1‑150 (MQ=255) aGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGgcgc < 2:2634494/121‑1 (MQ=255) tttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAAc < 1:1448490/133‑1 (MQ=255) tttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa > 2:2894044/1‑150 (MQ=255) tttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa < 2:622004/150‑1 (MQ=255) tttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa < 1:2894044/150‑1 (MQ=255) ttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGag < 2:2659373/150‑1 (MQ=255) aTTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTc > 2:283280/1‑150 (MQ=255) gTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTg < 2:1202436/150‑1 (MQ=255) gCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAg < 1:1812251/84‑1 (MQ=255) cTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAg > 2:1967868/1‑82 (MQ=255) cTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAg < 1:1967868/82‑1 (MQ=255) tGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGt > 2:1055925/1‑150 (MQ=255) tGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCAAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGt > 1:364399/1‑150 (MQ=255) tGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGACCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTc < 2:166629/123‑1 (MQ=255) tGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGACCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTc > 1:166629/1‑123 (MQ=255) gggAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTgg > 1:2844012/1‑150 (MQ=255) aaaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGcc > 2:1416999/1‑69 (MQ=255) aaaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGa > 1:2353120/1‑132 (MQ=255) aaaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGa < 2:2353120/132‑1 (MQ=255) aaaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAgg > 1:2896498/1‑150 (MQ=255) aaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGACACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGGGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGt < 2:2210611/150‑1 (MQ=255) aGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGTAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTc < 2:2844012/150‑1 (MQ=255) aGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGag > 1:960273/1‑118 (MQ=255) aGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGag < 2:960273/118‑1 (MQ=255) aGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTc < 2:1158542/150‑1 (MQ=255) gCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAAc < 2:2368730/111‑1 (MQ=255) gCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCa < 1:1546704/150‑1 (MQ=255) ccAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCaa < 1:2399406/91‑1 (MQ=255) ccAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAg > 2:2776528/1‑150 (MQ=255) aGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCa > 1:977429/1‑142 (MQ=255) gCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCAAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCAt < 2:364399/150‑1 (MQ=255) tAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACt > 1:2181629/1‑126 (MQ=255) tAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACt < 2:2181629/126‑1 (MQ=255) tAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCCTgg > 2:2619229/1‑149 (MQ=255) aaCGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCACTGGAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCg > 2:156490/1‑150 (MQ=255) aCGGAAAGTCTCCTGGCAGGAGGGCCGTGAGGAAGTTTTGTTCTGGGCCAATGGGCCTGAATGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTTTATCGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCgg < 2:1283237/150‑1 (MQ=255) aCGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCAttt > 1:745071/1‑116 (MQ=255) aCGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCAttt < 2:745071/116‑1 (MQ=255) cGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCggg < 1:1962658/150‑1 (MQ=255) ggAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCa < 1:1008116/133‑1 (MQ=255) ggAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCa > 2:1008116/1‑133 (MQ=255) aaaGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGAt > 1:490490/1‑150 (MQ=255) tcCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa < 2:826836/96‑1 (MQ=255) tcCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGAc > 1:236515/1‑150 (MQ=255) tcCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGAc < 1:283280/150‑1 (MQ=255) tcCTGGCACGAGAGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGAc > 2:1670814/1‑150 (MQ=255) tGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGc > 1:2151577/1‑113 (MQ=255) tGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGc < 2:2151577/113‑1 (MQ=255) tGGCACGAGAGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGt < 1:1670814/150‑1 (MQ=255) gCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCCAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTcg > 2:433610/1‑149 (MQ=255) gAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTc < 1:433610/150‑1 (MQ=255) ggCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGtt < 1:1344445/150‑1 (MQ=255) ggAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGtt < 1:99558/69‑1 (MQ=255) agaAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAgg > 2:2727713/1‑150 (MQ=255) gaAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTc > 1:3059228/1‑82 (MQ=255) gaAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTc < 2:3059228/82‑1 (MQ=255) aaCTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCgg < 2:2460778/150‑1 (MQ=255) cTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCa > 2:1126731/1‑88 (MQ=255) cTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCa < 1:1126731/88‑1 (MQ=255) ttttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCt > 2:1732655/1‑150 (MQ=255) ttCGACAGGGCCAATGGCCCTGAAGGTTTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt < 1:2620885/150‑1 (MQ=255) ttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt < 2:1743554/150‑1 (MQ=255) ttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt < 1:1827902/150‑1 (MQ=255) tCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGa > 2:1836969/1‑121 (MQ=255) cttcAGGGCCATTGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACt < 1:1257684/82‑1 (MQ=255) cGACAGGGCCAATGGCCCTGAAGGTGTGTTCGGCGCCAGTCAAGGTGACCTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGGAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtgt < 1:2619229/150‑1 (MQ=255) tcAGGGCCATTGGCCCTGTAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCg < 1:2236457/128‑1 (MQ=255) tcAGGGCCATTGGCCCTGTAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCg > 2:2236457/2‑129 (MQ=255) aCAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa > 2:1178089/1‑65 (MQ=255) aCAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa < 1:1178089/65‑1 (MQ=255) aCAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGTCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGtt > 2:990396/1‑132 (MQ=255) aGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACg < 1:828418/118‑1 (MQ=255) gggCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGc < 2:2896498/150‑1 (MQ=255) ggCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGCg > 1:2423989/1‑150 (MQ=255) | GTGTGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGCG > NC_002947/2108914‑2109206 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |