| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,208,183 | A→T | 5.1% | M118L (ATG→TTG) | PP_1951 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,208,183 | 0 | A | T | 5.1% | 349.4 / 7.1 | 112 | M118L (ATG→TTG) | PP_1951 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (57/49); new base T (3/3); total (60/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TGACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTCGA > NC_002947/2208037‑2208332 | tgACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGc > 1:1873732/1‑150 (MQ=255) gACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCt > 1:2014235/1‑150 (MQ=255) gACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATACGCt < 2:179779/150‑1 (MQ=255) gACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATACGCt < 2:181950/150‑1 (MQ=255) aCGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTg > 2:2876518/1‑150 (MQ=255) aCGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTg > 2:1803088/1‑150 (MQ=255) cGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTgg < 2:1231172/150‑1 (MQ=255) ggACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGga > 1:2645487/1‑150 (MQ=255) gACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGAAGGGGAACGAGAACCAGCAAATATGCTGgaa < 1:2830392/150‑1 (MQ=255) agaTGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGGGGGC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATa < 1:191451/150‑1 (MQ=255) aTGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACt < 2:2204946/150‑1 (MQ=255) cTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCgg < 1:492095/150‑1 (MQ=255) cTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCgg < 1:1737019/150‑1 (MQ=255) atACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCt < 1:236347/150‑1 (MQ=255) gTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTggag > 1:2698525/1‑150 (MQ=255) tttAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTggagg > 2:831629/1‑150 (MQ=255) tttAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgga < 2:1337050/148‑1 (MQ=255) tttAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgga > 1:1337050/1‑148 (MQ=255) aaTGCTGTAGCAAAAGGGCTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCAGGGTCCACAGGGAACCGGGGGTCTCGTGACTCAATGCCGCACGGGCACGGGAAACCGCAAATTGGCGAGAAGGATACTCGGACCATCGCTGGAGGAAg < 1:2995694/150‑1 (MQ=255) gCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTc > 2:720383/1‑150 (MQ=255) gCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTT‑TCAAACAGTCGGGTTCGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTc > 1:534742/1‑150 (MQ=255) tGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCATATTTGCTgg < 1:1315564/116‑1 (MQ=255) tGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCATATTTGCTgg > 2:1315564/1‑116 (MQ=255) tGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAg < 2:670061/145‑1 (MQ=255) tGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAg > 1:670061/1‑145 (MQ=255) tGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCAt > 2:1851429/1‑150 (MQ=255) gcagGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTc > 2:991430/1‑150 (MQ=255) gCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGcc > 2:2171983/1‑150 (MQ=255) gCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGcc > 2:414358/1‑150 (MQ=255) tttGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTAGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTa > 2:2719909/1‑150 (MQ=255) tttGGTGGATTGGACATTGTATTGGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTa > 2:1655417/1‑150 (MQ=255) tggATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGc > 2:2132857/1‑150 (MQ=255) ttGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCtgtg < 1:1851429/150‑1 (MQ=255) ggACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGtt < 1:2876518/150‑1 (MQ=255) ttGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTAtt < 1:1309788/150‑1 (MQ=255) ttGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTAtt < 1:930013/150‑1 (MQ=255) tgtTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGa < 2:1873732/150‑1 (MQ=255) tgtTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGa > 1:1528354/1‑150 (MQ=255) gtTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgg > 2:1431884/1‑106 (MQ=255) gtTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgg < 1:1431884/106‑1 (MQ=255) ttCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCg > 1:420908/1‑93 (MQ=255) ttCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCg < 2:420908/93‑1 (MQ=255) ttCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATa > 1:1803313/1‑150 (MQ=255) tCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATaa < 1:831629/150‑1 (MQ=255) aC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCAt < 2:736529/92‑1 (MQ=255) aC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCAt > 1:736529/1‑92 (MQ=255) cGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCtgctgc > 2:1134893/1‑150 (MQ=255) tCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGcac > 1:845419/1‑148 (MQ=255) tCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGcac < 2:845419/148‑1 (MQ=255) ccAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCAt > 2:2431796/1‑95 (MQ=255) ccAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCAt < 1:2431796/95‑1 (MQ=255) aGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATgag > 2:916101/1‑150 (MQ=255) gcaCCTGGATTTGCTGCACTCAATGCCGCAGGGGAACGACTACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATgaga < 1:2806476/148‑1 (MQ=255) gACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCt < 2:2795442/117‑1 (MQ=255) gACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCt > 1:2795442/1‑117 (MQ=255) ccTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGgaa > 1:889349/1‑57 (MQ=255) ccTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGgaa < 2:889349/57‑1 (MQ=255) ccTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCt > 2:2604913/1‑150 (MQ=255) ggATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCg > 1:1865532/1‑71 (MQ=255) ggATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCg < 2:1865532/71‑1 (MQ=255) ggATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAAc > 2:1584491/1‑150 (MQ=255) aTTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATgaga < 2:1746720/142‑1 (MQ=255) aCTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATaa > 2:670310/1‑110 (MQ=255) aCTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAAc > 2:2305553/1‑139 (MQ=255) tCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCtg < 2:1470060/93‑1 (MQ=255) cAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAat < 1:2719909/150‑1 (MQ=255) aaTGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAatt > 1:1280732/1‑150 (MQ=255) aTGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgga > 2:2154169/1‑60 (MQ=255) aTGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTgga < 1:2154169/60‑1 (MQ=255) cAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTc < 2:1733046/94‑1 (MQ=255) cAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTc > 1:1733046/1‑94 (MQ=255) cAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGa > 2:683943/1‑150 (MQ=255) gAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGagag > 2:478538/1‑118 (MQ=255) gAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGagag < 1:478538/118‑1 (MQ=255) gAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGaccacc > 1:1554737/1‑150 (MQ=255) aCGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGc > 2:2289357/1‑107 (MQ=255) aCGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCAGCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGc < 1:2289357/107‑1 (MQ=255) agaACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGgt < 2:2698525/150‑1 (MQ=255) agaACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGgt > 1:1283866/1‑150 (MQ=255) ttccAGCATATTTGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGgtgt > 1:1679416/3‑150 (MQ=255) ttccAGCATATTTGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGgtgt > 1:2339559/3‑150 (MQ=255) ccAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCtg < 1:2107523/70‑1 (MQ=255) ccAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCtg > 2:2107523/1‑70 (MQ=255) ccAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATtgt > 1:2035053/1‑134 (MQ=255) ccAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATtgt < 2:2035053/134‑1 (MQ=255) ccAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCg > 2:1637671/1‑150 (MQ=255) cAGCATATTTGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCgg < 2:1679416/150‑1 (MQ=255) cAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTgcgc < 1:1397517/96‑1 (MQ=255) cAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTgcgc > 2:1397517/1‑96 (MQ=255) cAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCgg > 1:2238246/1‑150 (MQ=255) aGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGtt > 2:2722186/1‑72 (MQ=255) aGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGtt < 1:2722186/72‑1 (MQ=255) gCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAAc > 2:639502/1‑111 (MQ=255) gCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAAc < 1:639502/111‑1 (MQ=255) gCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGcc > 1:630033/1‑150 (MQ=255) cAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGccc < 1:1584491/150‑1 (MQ=255) atatGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTc > 2:990590/1‑150 (MQ=255) atatGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTc < 1:916101/150‑1 (MQ=255) tatGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTCg > 2:344452/1‑150 (MQ=255) atGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTCGa < 1:1803088/150‑1 (MQ=255) | TGACGGACCGAGATGCTGTAGATGATACGTTTAATGCTGTAGCAGCAGGCTTTGGTGGATTGGACATTGTGTTCGCCAAC‑GCCGGGATTGATCCAGGACCTGGATTCGCTGCACTCAATGCCGCAGGGGAACGAGAACCAGCAAATATGCTGGAAGAATACTCGGACCATCGCTGGAGGAAGGTCATCTCCGTCAGCCTAGATGCTGTGTTCTATTCGATAAGAGCTGCTGCGCGGCACATGAGAGCTAACCGATCTGGCTCAATTATTGTGACCACCTCGGTGTCGGCCCTTCGA > NC_002947/2208037‑2208332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |