Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 2,461,750 | C→A | 5.2% | P236T (CCG→ACG) | lolC → | lipoprotein releasing system transmembrane protein LolC |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 2,461,750 | 0 | C | A | 5.2% | 422.1 / 5.1 | 131 | P236T (CCG→ACG) | lolC | lipoprotein releasing system transmembrane protein LolC |
Reads supporting (aligned to +/- strand): ref base C (63/61); new base A (3/4); total (66/65) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 |
Only 100 of 132 total aligned reads displayed.
GTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTG > NC_002947/2461609‑2461896 | gTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATGAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa < 2:2257742/150‑1 (MQ=255) gTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa > 2:1017346/1‑150 (MQ=255) cccTTCCGGGTTGGCG‑TGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 2:1421764/149‑1 (MQ=255) aCCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 1:2149772/1‑150 (MQ=255) aCCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:404091/1‑150 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:569502/150‑1 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1401684/150‑1 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1545871/150‑1 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1670075/150‑1 (MQ=255) cTTCCACGTTGGCGCGGGGGCGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAg > 1:2397330/1‑150 (MQ=255) ttCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACAGCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGc > 2:432281/1‑150 (MQ=255) aCGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCAGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCg > 1:2201902/1‑150 (MQ=255) cGTTGGCGCGGGGGAGACCGCCGGCTACCTGGGCCTGAGCAACAGCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGCTCCAGGCTACGCGCGGCGCCTGGaacaggtc < 2:1111654/150‑8 (MQ=255) gcgcGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCcagc < 2:175273/150‑1 (MQ=255) gggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCTACGCGCGGCGCCTGGaa < 1:1924754/133‑2 (MQ=255) gggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCTACGCGCGGCGCCTGGaa > 2:1924754/1‑132 (MQ=255) ggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTggg > 1:2670510/1‑150 (MQ=255) gaTCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGa > 2:42574/1‑150 (MQ=255) tCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGAcc > 2:353625/1‑150 (MQ=255) cGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCa > 2:1696061/1‑150 (MQ=255) cGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCa < 2:2149772/150‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 2:1223746/119‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa > 1:1223746/1‑119 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt < 2:2842210/150‑1 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCta < 2:2261579/150‑1 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCta < 1:1420956/150‑1 (MQ=255) cTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtat > 2:2403477/1‑150 (MQ=255) tGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtata < 2:2670510/150‑1 (MQ=255) gggCCTGCCCAACATCCGCGACATGTCACGCATGCCCCGTTGGCCGTCACCTCACTGGCAGATCCTGCGCCGGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGAATCGATCAGCAGCTGGGCTACCATGAATTCTATAg < 2:2201902/150‑1 (MQ=255) gggCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAg < 2:1168687/150‑1 (MQ=255) gCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGAGCCAGCGTCTGCATCACCTGGTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGcc < 2:1642520/150‑1 (MQ=255) cAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGTGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTg > 2:388542/1‑150 (MQ=255) cAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTg > 1:1467996/1‑150 (MQ=255) cATCCGCGACCGGGCCCGCCTGCACCGCTGGACGCCCGACCCGGTCCAGGGCCTGCGCCTGAAGTTTGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCACGAATTCTATAGCCGTGACTGGAc < 1:357009/150‑1 (MQ=255) cATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGc > 1:42520/1‑96 (MQ=255) tCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGAccc > 2:911778/1‑150 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg < 1:2182780/97‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:2182780/1‑97 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCg < 2:2450795/150‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCg > 2:451306/1‑150 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCg < 2:367691/150‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAACCGTGACTGGACCCg > 1:2820417/1‑150 (MQ=255) aGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt < 1:404091/150‑1 (MQ=255) cGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc < 1:432281/150‑1 (MQ=255) aCCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAccc > 1:2902899/1‑150 (MQ=255) tGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGa > 2:2195794/1‑112 (MQ=255) tGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACg > 2:2097895/1‑150 (MQ=255) tGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt > 1:2746771/1‑134 (MQ=255) aCCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCGCGGCAACCTg < 1:744732/146‑1 (MQ=255) aCCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTg > 2:744732/1‑146 (MQ=255) ccGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:1424700/1‑76 (MQ=255) cTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc < 1:181135/129‑1 (MQ=255) cTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc > 2:181135/1‑129 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1433616/68‑1 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCt < 1:740116/84‑1 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATcc > 2:2597040/1‑145 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATcc < 1:2597040/145‑1 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATg > 1:1540809/1‑150 (MQ=255) ccAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGaa < 1:2421023/91‑1 (MQ=255) caaGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGaa > 2:2421023/3‑91 (MQ=255) ggTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa > 2:2433086/1‑150 (MQ=255) gTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAg > 2:1539076/1‑150 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc < 1:2403477/150‑1 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc > 1:351555/1‑150 (MQ=255) aaGGGACTGCCCATGAAGTTCGACGACCTGTTCCAGACGCAGCCCGACGCTCGGAATATCGCCCAGCAGCTGGACGACCAGGAATCCTATAGCCGTAACTGGACCCGTACCCACAGCAACATGTAACAGGAAATCCAGATGGAAAAGGcc > 2:1201242/2‑150 (MQ=255) aGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAg < 1:960560/128‑1 (MQ=255) aGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGGACCAGGCGATCCTTATGGAAAAGGCCa < 2:1887741/150‑1 (MQ=255) gggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGTGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCAt < 1:388542/150‑1 (MQ=255) gggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCGTCGCCCAGCTGCTGGGCGatg < 2:2004073/77‑3 (MQ=39) gggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCGTCGCCCAGCTGCTGGGCGatg > 1:2004073/1‑75 (MQ=39) gCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGa > 1:66487/1‑150 (MQ=255) ccTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGAt < 2:1467996/150‑1 (MQ=255) ccTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGAt < 2:66487/150‑1 (MQ=255) gcgcCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCgg > 2:2317008/1‑150 (MQ=255) cgcCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGc < 1:1778343/150‑1 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAgg > 2:1499963/1‑118 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAgg < 1:1499963/118‑1 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCctg > 1:2288327/1‑150 (MQ=255) tGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCGGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGTCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCctgc < 2:614636/150‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa > 2:3014669/1‑129 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 1:3014669/129‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt < 1:2210712/149‑1 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtg < 1:2134225/150‑1 (MQ=255) acgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgctgc < 1:353625/150‑1 (MQ=255) acgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgctgc < 2:351555/150‑1 (MQ=255) cgacCTGTTCCAGGCGCCGCGCGTAGCGTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTgctgct < 2:2818427/150‑1 (MQ=255) acCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGa < 1:1937923/150‑1 (MQ=255) gatgctCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTAc > 1:577142/6‑100 (MQ=38) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGtt > 2:2830945/1‑140 (MQ=255) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGtt < 1:2830945/140‑1 (MQ=255) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATc > 1:268146/1‑150 (MQ=255) atgatCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGGTCCGTATGGAAAAGGGCATGATCGCCCTGCGGTTGGTGCTGacc > 1:886360/5‑148 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt > 2:76143/1‑136 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtg > 1:1745864/1‑150 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAACATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGGAAAGGCCATGATCGGCCTGCTGTtgctg < 2:1323798/140‑1 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAACATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGGAAAGGCCATGATCGGCCTGCTGTtgctg > 1:1323798/1‑140 (MQ=255) cAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa > 1:2725698/1‑113 (MQ=255) cAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 2:2725698/113‑1 (MQ=255) aGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtata < 1:3002080/57‑1 (MQ=255) gcgcCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcggtg > 2:602225/1‑150 (MQ=255) | GTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTG > NC_002947/2461609‑2461896 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |