| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,461,758 | A→C | 5.7% | V238V (GTA→GTC) ‡ | lolC → | lipoprotein releasing system transmembrane protein LolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,461,758 | 0 | A | C | 5.7% | 382.2 / 10.2 | 132 | V238V (GTA→GTC) ‡ | lolC | lipoprotein releasing system transmembrane protein LolC |
| Reads supporting (aligned to +/- strand): ref base A (63/61); new base C (4/4); total (67/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
GTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTGGCGGCGTTCAA > NC_002947/2461609‑2461907 | gTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATGAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa < 2:2257742/150‑1 (MQ=255)gTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa > 2:1017346/1‑150 (MQ=255) gCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCt > 1:2842210/1‑150 (MQ=255) cACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCCCCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTg < 2:2172284/150‑1 (MQ=255) cccTTCCGGGTTGGCG‑TGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 2:1421764/149‑1 (MQ=255) aCCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:404091/1‑150 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:569502/150‑1 (MQ=255) ccTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1670075/150‑1 (MQ=255) cTTCCACGTTGGCGCGGGGGCGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAg > 1:2397330/1‑150 (MQ=255) ttCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACAGCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGc > 2:432281/1‑150 (MQ=255) gTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGCCCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGcc > 1:614636/1‑150 (MQ=255) ggggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTg > 1:367691/1‑150 (MQ=255) gggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCTACGCGCGGCGCCTGGaa < 1:1924754/133‑2 (MQ=255) ggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTggg > 1:2670510/1‑150 (MQ=255) tCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGAcc > 2:353625/1‑150 (MQ=255) cGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCa > 2:1696061/1‑150 (MQ=255) gACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTACAGGGCCTGCGCCTGAAGTTCGACGACCTGTTGCATGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAg > 1:274053/1‑150 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 2:1223746/119‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa > 1:1223746/1‑119 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt < 2:2842210/150‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt > 1:1887741/1‑150 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCta < 2:2261579/150‑1 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCta < 1:1420956/150‑1 (MQ=255) cTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtat > 2:2403477/1‑150 (MQ=255) tGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtata < 2:2670510/150‑1 (MQ=255) gggCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAg < 2:1168687/150‑1 (MQ=255) gCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGAGCCAGCGTCTGCATCACCTGGTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGcc < 2:1642520/150‑1 (MQ=255) ccAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACt < 2:2537256/150‑1 (MQ=255) cAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGTGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTg > 2:388542/1‑150 (MQ=255) cATCCGCGACCGGGCCCGCCTGCACCGCTGGACGCCCGACCCGGTCCAGGGCCTGCGCCTGAAGTTTGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCACGAATTCTATAGCCGTGACTGGAc < 1:357009/150‑1 (MQ=255) cATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGc < 2:42520/96‑1 (MQ=255) cATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGc > 1:42520/1‑96 (MQ=255) tCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGAccc > 2:911778/1‑150 (MQ=255) gcAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGAccc < 1:42574/149‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:2182780/1‑97 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg < 1:2182780/97‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCg < 2:2450795/150‑1 (MQ=255) cAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCg > 2:451306/1‑150 (MQ=255) aGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt < 1:404091/150‑1 (MQ=255) aCCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAccc > 1:2902899/1‑150 (MQ=255) tGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGa < 1:2195794/112‑1 (MQ=255) tGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGa > 2:2195794/1‑112 (MQ=255) tGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACg > 2:2097895/1‑150 (MQ=255) ccGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGCGCATCGCCCAGCAGCTGGGCGACCCGGAATTCTATAGCCGTGACTGGACCCGTACCCGCGGCaa > 1:337325/1‑150 (MQ=255) ccGCCTGCACCGCTGGAAGCCCGACAAGCGCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGAGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCaa < 1:2007700/150‑1 (MQ=255) tGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt > 1:2746771/1‑134 (MQ=255) tGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt < 2:2746771/134‑1 (MQ=255) aCCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCGCGGCAACCTg < 1:744732/146‑1 (MQ=255) ccGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg > 2:1424700/1‑76 (MQ=255) ccGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTgg < 1:1424700/76‑1 (MQ=255) cTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc > 2:181135/1‑129 (MQ=255) cTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc < 1:181135/129‑1 (MQ=255) gAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGAt > 2:1937923/1‑150 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGa < 1:1433616/68‑1 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCt < 1:740116/84‑1 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCt > 2:740116/1‑84 (MQ=255) ccGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCACCGCGGAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTa > 2:1049161/1‑150 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATcc < 1:2597040/145‑1 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATg > 1:1540809/1‑150 (MQ=255) ccAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGaa < 1:2421023/91‑1 (MQ=255) caaGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGaa > 2:2421023/3‑91 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc > 1:351555/1‑150 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc < 2:1540809/150‑1 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc < 1:2403477/150‑1 (MQ=255) aaGGGACTGCCCATGAAGTTCGACGACCTGTTCCAGACGCAGCCCGACGCTCGGAATATCGCCCAGCAGCTGGACGACCAGGAATCCTATAGCCGTAACTGGACCCGTACCCACAGCAACATGTAACAGGAAATCCAGATGGAAAAGGcc > 2:1201242/2‑150 (MQ=255) aGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAg < 1:960560/128‑1 (MQ=255) aGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGGACCAGGCGATCCTTATGGAAAAGGCCa < 2:1887741/150‑1 (MQ=255) gggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCGTCGCCCAGCTGCTGGGCGatg > 1:2004073/1‑75 (MQ=39) gggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCGTCGCCCAGCTGCTGGGCGatg < 2:2004073/77‑3 (MQ=39) ccTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGAt < 2:1467996/150‑1 (MQ=255) ccTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGAt < 2:66487/150‑1 (MQ=255) cTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATc > 2:1778343/1‑150 (MQ=255) tGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCg < 1:1539076/150‑1 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAgg > 2:1499963/1‑118 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAgg < 1:1499963/118‑1 (MQ=255) cTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCctg > 1:2288327/1‑150 (MQ=255) tGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCGGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGTCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCctgc < 2:614636/150‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 1:3014669/129‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt < 1:2210712/149‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt > 2:2210712/1‑149 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtg < 1:2134225/150‑1 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGCAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGttt > 2:3647/1‑149 (MQ=255) acgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgctgc < 2:351555/150‑1 (MQ=255) gatgctCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTAc < 2:577142/95‑1 (MQ=37) gatgctCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTAc > 1:577142/6‑100 (MQ=38) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCCGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATc < 1:1696061/150‑1 (MQ=255) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGtt < 1:2830945/140‑1 (MQ=255) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGtt > 2:2830945/1‑140 (MQ=255) cTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATc > 1:268146/1‑150 (MQ=255) gTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTCTAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgt < 2:2397330/150‑1 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt < 1:76143/136‑1 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGt > 2:76143/1‑136 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtg > 1:1745864/1‑150 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAACATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGGAAAGGCCATGATCGGCCTGCTGTtgctg > 1:1323798/1‑140 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAACATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGGAAAGGCCATGATCGGCCTGCTGTtgctg < 2:1323798/140‑1 (MQ=255) cAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 2:2725698/113‑1 (MQ=255) aGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtata > 2:3002080/1‑57 (MQ=255) gcgTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTGGCGGCGt < 1:2317008/150‑1 (MQ=255) tAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTGGCGGCGTTCa > 1:2796443/1‑150 (MQ=255) aGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTGGCGGCGTTCaa < 1:1017346/150‑1 (MQ=255) | GTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTGGCGGCGTTCAA > NC_002947/2461609‑2461907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |