| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,795,013 | A→G | 5.5% | intergenic (+78/+34) | PP_2447 → / ← puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,795,013 | 0 | A | G | 5.5% | 431.1 / 9.7 | 145 | intergenic (+78/+34) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
| Reads supporting (aligned to +/- strand): ref base A (71/66); new base G (3/5); total (74/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.19e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
GCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGA > NC_002947/2794864‑2795162 | gctgcGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCa > 2:943817/1‑150 (MQ=255) gcGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGCACGGGTGTACCGGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGt < 1:2491928/150‑1 (MQ=255) ggATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTtt > 1:2190507‑M2/1‑148 (MQ=255) gctgcgcgtacccttcagcgccatcggtgcctggtactacagcctgcgcgatcgcctgggcttctgattcaggcaggcctggccTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGGCCGTGTGGGCGCAGGttt > 2:443251‑M1/85‑150 (MQ=255) aTGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgc > 1:2701591‑M2/1‑146 (MQ=255) aTGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgc > 2:2663351‑M2/1‑146 (MQ=255) cgcgtacccttcagcgccatcggtgcctggtactacagcctgcgcgatcgcctgggcttctgattcaggcaggcctggccTCTTCGCCGGCAAACCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCg > 1:2767596‑M1/81‑150 (MQ=255) gCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaag < 1:2913829‑M2/150‑13 (MQ=255) cAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaag < 1:729173‑M2/148‑13 (MQ=255) cAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaag > 2:729173‑M2/1‑136 (MQ=255) aGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGaggc < 1:347904/150‑1 (MQ=255) gCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGgcct > 2:2591921/1‑150 (MQ=255) cAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCGGgcctg < 2:1787349/150‑1 (MQ=255) aaGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGgcctgc < 2:2913829/150‑1 (MQ=255) aaGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGgcctgc > 1:1816737/1‑150 (MQ=255) aaGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCACCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTCCCGGCGAAGAGGCCAGgcctgc > 1:1592369/1‑150 (MQ=255) aTTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGaa > 2:2133606/1‑150 (MQ=255) acagcctgcgcgatcgcctgggcttctgattcaggcaggcctggccTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAagag < 2:1812598‑M1/78‑1 (MQ=255) cAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAg < 1:2989699/150‑1 (MQ=255) ggTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCa > 1:2453212/1‑136 (MQ=255) gTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTACCTGAATCAGAAGCCCAG‑GCGATc < 1:946858/150‑1 (MQ=255) tCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCa > 1:2121000/1‑142 (MQ=255) tCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCa < 2:2121000/142‑1 (MQ=255) tCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATcg < 2:798061/150‑1 (MQ=255) aaTAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATcgcg < 2:1873252/150‑1 (MQ=255) gCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAgg < 1:2591921/150‑1 (MQ=255) ccTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaa < 1:927004‑M2/105‑12 (MQ=255) ccTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGc > 2:2888876/1‑150 (MQ=255) ccTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGc > 2:329315/1‑150 (MQ=255) cTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCt < 1:943817/150‑1 (MQ=255) cTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCt < 1:1093374/150‑1 (MQ=255) tGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTg < 1:2133606/150‑1 (MQ=255) gAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCCG‑GCGATCGCGCAGGCTgt > 1:3015305/1‑150 (MQ=255) gAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTTGGCGCAGGTTTGCCGGCGAAGAGGCCAGGGCAACAAGTAAAAGAAGCCCAG‑GCGATCGCGCAGGCTgtagta > 1:1735645/1‑150 (MQ=255) gAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAg < 2:816473/129‑1 (MQ=255) gAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAg > 1:816473/1‑129 (MQ=255) ccTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCgc < 2:2817712/150‑2 (MQ=255) cTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaaga > 2:1451476‑M2/1‑75 (MQ=255) cTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaaga < 1:1451476‑M2/88‑14 (MQ=255) cTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGAt > 1:2040259/1‑150 (MQ=255) cGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCt > 1:901265/1‑150 (MQ=255) cGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGGTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCt > 2:2402236/1‑150 (MQ=255) ggCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgcc < 1:946894‑M2/73‑6 (MQ=255) ggCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgcc > 2:946894‑M2/1‑68 (MQ=255) gCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGa < 1:1940905/150‑1 (MQ=255) ttcttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttg < 1:104441‑M2/150‑86 (MQ=255) CTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGTGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTgta > 1:1280382‑M1/1‑123 (MQ=255) CTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTgta < 2:1280382‑M1/123‑1 (MQ=255) CCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAg > 2:2232109‑M1/1‑100 (MQ=255) CCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAg < 1:2232109‑M1/100‑1 (MQ=255) aaGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgct > 1:2887824‑M2/1‑53 (MQ=255) AAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCgcagc > 2:1816737‑M1/1‑150 (MQ=255) AAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCgcagc < 1:2825573‑M1/150‑1 (MQ=255) aGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttgg > 1:582755‑M2/1‑52 (MQ=255) ccGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatccgcag < 1:1040546‑M2/150‑102 (MQ=255) ccGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCt > 1:202470/1‑150 (MQ=255) ccGCGCCCACAGGATTTGTGCTTATTGCACAGCCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCt > 1:2205457/1‑150 (MQ=255) gcgcCGACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTgg < 2:2867412/150‑1 (MQ=255) cccACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGaa < 1:2106008/128‑1 (MQ=255) ccACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCAc > 1:973299/1‑150 (MQ=255) ccACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCAc > 1:618659/1‑150 (MQ=255) cacaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCt > 1:1690225/1‑99 (MQ=255) cacaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCt < 2:1690225/99‑1 (MQ=255) acaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttgg < 1:826887‑M2/127‑87 (MQ=255) acaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgcc > 1:1388411‑M2/1‑41 (MQ=255) acaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgcc < 2:1388411‑M2/105‑65 (MQ=255) acaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCAccc > 1:1206497/1‑150 (MQ=255) acaGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCAccc < 2:2288127/150‑1 (MQ=255) caGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGaa > 1:1166903/1‑124 (MQ=255) caGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCg > 2:341581/1‑150 (MQ=255) aGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacagg < 2:1873740‑M2/64‑26 (MQ=255) aGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacagg > 1:1873740‑M2/1‑39 (MQ=255) aGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaggccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatccgc < 1:2817379‑M2/138‑100 (MQ=255) aGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatccgcagcatgcaacca < 1:717452‑M2/150‑112 (MQ=255) gactgtgCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTgta < 1:46746/93‑1 (MQ=255) gactgtgCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTgta > 2:46746/4‑96 (MQ=255) aTTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGaa < 2:2040259/150‑1 (MQ=255) tttGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTg > 2:1557471/1‑137 (MQ=255) tttGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTg < 1:1557471/137‑1 (MQ=255) gtgCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACggg < 2:901265/150‑1 (MQ=255) tgCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGt > 2:2346679/1‑150 (MQ=255) gCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCgca > 2:954249/1‑125 (MQ=255) gCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCTGGGAACGGGTa < 1:265543/150‑1 (MQ=255) gCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTa < 2:20898/150‑1 (MQ=255) gCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTa < 2:1592369/150‑1 (MQ=255) cTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATgg > 1:293724/1‑106 (MQ=255) cTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAg > 2:642709/1‑114 (MQ=255) ttATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGt > 2:2559251/1‑150 (MQ=255) tATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTg < 2:868930/150‑1 (MQ=255) ttGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCg > 1:295592/1‑150 (MQ=255) gCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGc > 2:1449575/1‑150 (MQ=255) acaGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCTGCGCGATcgcctg > 2:1117353/1‑72 (MQ=38) acaGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGa < 2:2378625/95‑1 (MQ=255) acaGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGa > 1:2378625/1‑95 (MQ=255) acaGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAg > 2:928443/1‑150 (MQ=255) aGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAg > 2:2925679/1‑86 (MQ=255) cGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGc > 2:2690975/1‑150 (MQ=255) gcgcAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCg < 2:2205457/150‑1 (MQ=255) gcgcAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCg > 2:2102110/1‑150 (MQ=255) gcAGGTTTGCTGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTc > 1:1441194/1‑150 (MQ=255) | GCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAG‑GCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGCATCTGGCCACCCGGGAACGGGTAGTGCGGCAGGCCGGCAAAGGCGTCGA > NC_002947/2794864‑2795162 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |