| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,830,015 | T→G | 6.0% | H192Q (CAT→CAG) | PP_2482 → | molybdenum cofactor biosynthesis protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,830,015 | 0 | T | G | 6.0% | 367.2 / 12.4 | 127 | H192Q (CAT→CAG) | PP_2482 | molybdenum cofactor biosynthesis protein A |
| Reads supporting (aligned to +/- strand): ref base T (59/60); new base G (5/3); total (64/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
ATTGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGTT > NC_002947/2829866‑2830164 | aTTGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAt > 2:1470020/1‑150 (MQ=255) cAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGcc > 2:1997726/1‑150 (MQ=255) aGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGccc < 1:391401/150‑1 (MQ=255) gcCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATg > 1:2244791/1‑150 (MQ=255) ggCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTGTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCt > 2:852733/1‑150 (MQ=255) ggCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCt > 2:1737191/1‑150 (MQ=255) gCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCtt < 2:2512196/150‑1 (MQ=255) gCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCtt > 1:1180598/1‑150 (MQ=255) cATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCttt < 2:597771/150‑1 (MQ=255) cATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCttt < 1:1069345/150‑1 (MQ=255) tGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTc < 2:2045610/150‑1 (MQ=255) cATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAc < 2:2244791/150‑1 (MQ=255) tCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTAccc > 1:553416/1‑150 (MQ=255) aGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGcaca > 2:337546/1‑133 (MQ=255) aGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGt < 2:287417/150‑1 (MQ=255) aGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGt > 2:1802508/1‑150 (MQ=255) gATCAACATGGTGCCGATGCGTGGTAGCAACCTCGGTCAAGTTTTGCCGATGTTGGCGTTCTGCCTTCAGCAGCGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCGTTTCGTACCCAGtt > 1:1605975/1‑150 (MQ=255) aTCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatgc < 1:230011/125‑4 (MQ=255) aTCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatgc > 2:230011/1‑122 (MQ=255) tCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtc > 1:300476/1‑149 (MQ=255) tCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtc < 2:300476/149‑1 (MQ=255) aaCATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAAGTTATTCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtcgtc < 1:2677324/150‑1 (MQ=255) aaCATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGTATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtcgtc < 2:1201894/150‑1 (MQ=255) aTGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGc > 1:1895821/1‑150 (MQ=255) aTGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCAAATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGc > 2:564987/1‑150 (MQ=255) gTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCtttt < 1:2584879/119‑1 (MQ=255) tGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAgctgct > 1:555542/1‑150 (MQ=255) ggTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGctgctg < 1:1470020/150‑1 (MQ=255) aGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTtcgtc < 1:1460018/129‑1 (MQ=255) gCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGc < 2:2907353/150‑1 (MQ=255) gCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGc < 1:291162/150‑1 (MQ=255) aCCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGCCGTCCAGCGCGAGCTGCTGGAGCttt > 2:503500/1‑149 (MQ=255) ccTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTAt > 1:469944/1‑150 (MQ=255) cTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATc > 1:2295166/1‑150 (MQ=255) tCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCg > 2:1748720/1‑150 (MQ=255) cGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCgg > 1:845739/1‑150 (MQ=255) gATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGc < 2:2564503/86‑1 (MQ=255) tCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAAGTTATGCGCATGTGGCAGCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGa > 1:1147720/1‑150 (MQ=255) tCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGa > 2:2648110/1‑150 (MQ=255) gTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTgg < 1:71440/133‑1 (MQ=255) gTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGt < 2:1180598/150‑1 (MQ=255) ttttGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatg > 2:2741115/1‑82 (MQ=255) ttttGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatg < 1:2741133/84‑3 (MQ=255) ttttGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCAGATGGCCCatg < 1:2741115/84‑3 (MQ=255) ttggcggtGTTGGGTTTCTGGCTTAATCAGGGTTAGGAGTTGCGTTTTATTGAACGTATGGCTATGTGCAATCTTTAATAGCTTGCACAGGCTTTTGGTAGCTAGTTCGTTGGCCAGCGCGAGCTGCTAGTTCTTATCGGCGAGCGTTAt < 2:528585/143‑1 (MQ=255) ttGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTAt < 1:1000460/150‑1 (MQ=255) ttGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTAt < 1:2648110/150‑1 (MQ=255) gCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGcac < 1:1207149/86‑1 (MQ=255) gCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGcac > 2:1207149/1‑86 (MQ=255) gCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGc > 1:590862/1‑150 (MQ=255) cccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGcc > 1:944424/1‑150 (MQ=255) ccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCt > 1:1116944/1‑150 (MQ=255) ccATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCt > 1:262415/1‑150 (MQ=255) gTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCAc < 1:2878654/150‑1 (MQ=255) cTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGTGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGa < 1:2049752/150‑1 (MQ=255) cTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGa < 1:2374634/150‑1 (MQ=255) cTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGa < 1:2901026/150‑1 (MQ=255) tGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAg > 1:2876632/1‑150 (MQ=255) tGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAg < 2:197260/150‑1 (MQ=255) gCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAgg < 1:355791/150‑1 (MQ=255) gCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAgg < 1:1997726/150‑1 (MQ=255) gCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAgg > 1:1716867/1‑150 (MQ=255) ccTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCAcc < 2:1749911/139‑1 (MQ=255) ccTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGgc > 1:2116791/1‑150 (MQ=255) ccTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCGGTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCAcc > 1:1749911/1‑139 (MQ=255) ttCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCg > 1:2564048/1‑117 (MQ=255) ttCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCg < 2:2564048/117‑1 (MQ=255) ttCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGgcgc > 1:1944730/1‑150 (MQ=255) agGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCtt < 2:1477586/127‑1 (MQ=255) agGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCtt > 1:1477586/1‑127 (MQ=255) ggCTACGAGTTGCGTTTTATCGACCTTATGCGCATGGGCCATCTGGCCCAGCCTGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGAc < 1:2510538/150‑1 (MQ=255) cTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTc > 2:1824735/1‑150 (MQ=255) cGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAg < 2:2189358/97‑1 (MQ=255) gAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCAcc < 1:2538413/150‑1 (MQ=255) ttGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACcgcg < 1:565353/150‑1 (MQ=255) ttGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACcgcg > 1:2989992/1‑150 (MQ=255) gCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCt > 1:1538158/1‑150 (MQ=255) gTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAg < 2:1133335/119‑1 (MQ=255) gTTGTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGc < 2:555542/150‑1 (MQ=255) ttttATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCtttt > 2:2652688/1‑52 (MQ=255) ttttATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCg > 2:2870411/1‑150 (MQ=255) ttttATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCg > 2:290157/1‑150 (MQ=255) tCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTtata < 2:472384/150‑1 (MQ=255) tCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCCGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTtata < 2:1538158/150‑1 (MQ=255) gAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGc > 2:2433558/1‑150 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAg < 2:1694545/113‑1 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAg > 1:1694545/1‑113 (MQ=255) ttATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTg > 2:2695801/1‑150 (MQ=255) tATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTgg < 2:1895821/150‑1 (MQ=255) atgctGGGCCAGATGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAg > 1:2589528/5‑150 (MQ=255) ttggCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGcgcg > 2:519280/3‑150 (MQ=255) ggCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 2:845739/150‑1 (MQ=255) ggCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 1:1802508/150‑1 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGTTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg > 1:2933568/1‑149 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCggg < 2:2933568/149‑1 (MQ=255) gCCATCTGGCCCAGCATGCACAGGCTTTTCGTAACCCGTTCGTCGGCAAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCgggg > 1:1020841/1‑150 (MQ=255) ccATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGc > 2:276454/1‑133 (MQ=255) ccATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGc < 2:944424/150‑1 (MQ=255) aTCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGt > 2:392837/1‑150 (MQ=255) tCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCAAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGtt > 2:2928677/1‑150 (MQ=255) | ATTGAGCAGGCGCGCCGAGCCGGCATGAGCATCAAGATCAACATGGTGCCGATGCGTGGTAGCAACCTCGATCAAGTTTTGCCCATGTTGGCGTTCTGCCTTCAGCAGGGCTACGAGTTGCGTTTTATCGAACTTATGCGCATGGGCCATCTGGCCCAGCATGCACAGGCTTTTCGTACCCAGTTCGTCGGCCAGCGCGAGCTGCTGGAGCTTATCGGCGAGCGTTATGCCTTCACCCAGGCTGAGGCGCCGGTAGACTCCACCGCGCTGCGTTATAGCGTTGGCGAGCGCGGGGCGTT > NC_002947/2829866‑2830164 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |