| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,899,279 | A→T | 5.0% | intergenic (+48/+20) | PP_2552 → / ← PP_2553 | DOPA decarboxylase/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,899,279 | 0 | A | T | 5.0% | 434.6 / 10.4 | 139 | intergenic (+48/+20) | PP_2552/PP_2553 | DOPA decarboxylase/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (62/69); new base T (2/5); total (65/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.40e-01 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GACGGGCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCC > NC_002947/2899130‑2899428 | gACGGGCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCa > 1:309188/1‑150 (MQ=255) cGGGCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCaaa < 1:650977/150‑1 (MQ=255) gCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAagca < 2:309188/150‑1 (MQ=255) gCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAagca > 2:546377/1‑150 (MQ=255) ttGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGTCTGTACTTTACCTTTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTg < 1:2522484/149‑1 (MQ=255) tGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCTTTGCAGCCCCttcgcg < 2:2768040/150‑6 (MQ=255) gTTTCGATTAGTGAGCTGCAGACGGAGCGGGGAGGTGTGCAGCGACTGTGGGCCCGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACGTGTATGAGCGGGCTTGTCAGCGAAGGGGCTGCAAAGCAGCCGCTGCAATCTATc > 2:825960/1‑150 (MQ=255) tttCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAagcagc < 2:1612003/135‑1 (MQ=255) tttCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAagcagc > 1:1612003/1‑135 (MQ=255) tttCGAGTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCa < 1:2440435/150‑1 (MQ=255) gCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGa > 1:1090644/1‑150 (MQ=255) ccgagcgaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGaa > 1:2529472/1‑150 (MQ=255) cgaccgaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGaaa < 1:1036696/150‑1 (MQ=255) cgaccgaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCACGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGaaa < 2:1007449/150‑1 (MQ=255) accgaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGc < 2:1798211/150‑1 (MQ=255) accgaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGc > 1:2651784/1‑150 (MQ=255) gaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAc > 1:354501/1‑150 (MQ=255) gaGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAc > 1:951016/1‑150 (MQ=255) gaGCGGGGGCATGGGCAGCGGCTGGGGGCACGTCTGTAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGAAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAc < 2:600634/150‑1 (MQ=255) aGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAcc < 2:620762/150‑1 (MQ=255) gCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCt < 1:339159/150‑1 (MQ=255) ggggggATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCttt > 1:1607354/1‑150 (MQ=255) gggggATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGCCTGCAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTa > 1:561647/1‑150 (MQ=255) gtgCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCAc > 1:2097559/1‑124 (MQ=255) gtgCAGCGGCTGTGGCCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCAc < 2:2097559/124‑1 (MQ=255) gCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACggctggct > 2:833791/1‑150 (MQ=255) cAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCtt > 2:2795448/1‑150 (MQ=255) cGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCAt < 2:2529472/150‑1 (MQ=255) gCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTAAGGTACCTGTATGAGCGGGCTTGCCCGCGAATGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAg < 1:825960/150‑1 (MQ=255) tgtgGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGc < 1:2795448/150‑1 (MQ=255) gtgGGCACGTCTGTAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCt > 1:1821428/1‑150 (MQ=255) gtgGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCt < 2:1607354/150‑1 (MQ=255) aCGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACggctggc > 1:796546/1‑134 (MQ=255) aCGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCttt < 1:589131/150‑1 (MQ=255) gTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACggct > 2:354025/1‑129 (MQ=255) tCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTcc < 2:1343273/150‑1 (MQ=255) cTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCa < 2:2045138/150‑1 (MQ=255) tGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCAt > 2:1502202/1‑150 (MQ=255) aGGACGTGATCGAGGGTTGAAGTCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCgg < 2:561647/150‑1 (MQ=255) aGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACATTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCgg > 1:431401/1‑150 (MQ=255) ggACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCGCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACggctggc < 2:248322/125‑1 (MQ=255) ggACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCGCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACggctggc > 1:248322/1‑125 (MQ=255) gACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCttt < 1:950886/115‑1 (MQ=255) gACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCttt > 2:950886/1‑115 (MQ=255) gACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCt > 2:347842/1‑150 (MQ=255) gTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTgg < 2:1394397/150‑1 (MQ=255) tGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAACGTAGCTGATCGTCGAGCTGTTGAGGCTGCCTTTTCCATCGGCTTGGc > 1:2214532/1‑150 (MQ=255) gATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCa < 2:2551157/123‑1 (MQ=255) aTCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGt > 1:680007/1‑150 (MQ=255) aTCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGAACGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGt < 1:333114/150‑1 (MQ=255) tCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTc > 2:2680348/1‑150 (MQ=255) aaGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTa > 2:125850/1‑101 (MQ=255) aGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAc > 1:1274919/1‑101 (MQ=255) aGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCt < 1:3050754/103‑1 (MQ=255) aGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGATGCAAAGCAGCAGTTGTTAACGATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCgg < 1:833791/150‑1 (MQ=255) aGGGCTGAAGCCTGTACAGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAcc < 1:2076752/102‑1 (MQ=255) aGGGCTGAAGCCTGTACAGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTAcc > 2:2076752/1‑102 (MQ=255) aGGGCTGAAGCATGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCt > 2:3050754/1‑103 (MQ=255) cTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTg > 1:2599166/1‑150 (MQ=255) aaGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGccc < 2:1821428/150‑1 (MQ=255) tGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGATGCCTTTTCCATCGGCTTg < 2:1141578/130‑1 (MQ=255) tGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGATGCCTTTTCCATCGGCTTg > 1:1141578/1‑130 (MQ=255) tACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCtt < 1:2680348/150‑1 (MQ=255) tACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCtt < 1:1222858/150‑1 (MQ=255) gTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCAt < 2:310915/150‑1 (MQ=255) aCCTTTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTg > 1:2472502/1‑122 (MQ=255) aCCTTTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTg < 2:2472502/122‑1 (MQ=255) ccTGTATGAGCGGGCTTGCCCGCGACGGGGCTACAAAGCAGCGCCTGCAATCTATCAGTGGCTCACCGCATGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGACTTGGCGTCCGGGTTGCCCAGGTCTTCCTTCGc > 2:1034943/1‑150 (MQ=255) ccTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCg > 1:1087639/1‑128 (MQ=255) ccTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCg < 2:1087639/128‑1 (MQ=255) ccTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCAGGGTTGCCCAGGTCTTCCATCGc < 1:347842/150‑1 (MQ=255) tGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAg > 2:2094211/1‑136 (MQ=255) tGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCa > 1:2046704/1‑150 (MQ=255) tATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATc < 2:1150184/111‑1 (MQ=255) tATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATc > 1:1150184/1‑111 (MQ=255) aTGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGc < 2:2694447/150‑1 (MQ=255) ttcgCGGGCAAGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCATGCg > 2:2254012/4‑150 (MQ=255) gCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACATCTGCTGCTGGCCTCATAGCCTGACTTTGCCAGCTTCTGGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTg > 1:1455355/1‑150 (MQ=255) gCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCACAGGCGCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTg > 1:1615674/1‑150 (MQ=255) cGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTgg < 2:951016/150‑1 (MQ=255) cGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTgg < 1:1502202/150‑1 (MQ=255) cGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCGGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTGGCCCAGGTCATCCATCGCCAGGCGGTgg < 2:2349793/150‑1 (MQ=255) cGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACATTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTgg < 2:431401/150‑1 (MQ=255) ttGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCtttt < 1:2657349/95‑1 (MQ=255) ttGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCtttt > 2:2657349/1‑95 (MQ=255) ttGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTc > 1:349798/1‑150 (MQ=255) gCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGACTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCg > 1:1686128/1‑150 (MQ=255) ccGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCAt < 1:2314530/128‑1 (MQ=255) ccGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCAt > 2:2314530/1‑128 (MQ=255) ccGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCggg > 1:3060056/1‑150 (MQ=255) ccGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCggg > 1:1369609/1‑150 (MQ=255) gcgAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGc > 2:1854961/1‑150 (MQ=255) gcaGGGGCTGCTTTGCAGCCCCTGCAAGCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTcc < 1:2082699/120‑1 (MQ=255) gggCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTa > 1:2592967/1‑150 (MQ=255) gCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAgg > 1:459311/1‑150 (MQ=255) tGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCggg < 1:1243671/138‑1 (MQ=255) tGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCggg > 2:1243671/1‑138 (MQ=255) tGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCt > 1:2369801/1‑150 (MQ=255) gCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGt > 1:2726225/1‑126 (MQ=255) aaaGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGcc > 1:1217007/1‑150 (MQ=255) | GACGGGCGGTGGATGGTGCGGGTTTCGATTGGTGCGCTGCCGACCGAGCGGGGGGATGTGCAGCGGCTGTGGGCACGTCTGCAGGACGTGATCAAGGGCTGAAGCCTGTACGGTACCTGTATGAGCGGGCTTGCCCGCGAAGGGGCTGCAAAGCAGCCCCTGCAATCTATCAGTGGCTCACCGCCTGAAAGCTACCTTTACGGCTGGCTTCATAGGCTGCCTTTTCCATCGGCTTGGCGTCCGGGTTGCCCAGGTCTTCCATCGCCAGGCGGTGGGTTTCCGGGGCAATGTAGGCTGCC > NC_002947/2899130‑2899428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |