| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 226,663 | G→A | 7.4% | intergenic (+70/‑63) | PP_0174 → / → PP_0175 | hypothetical protein/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 226,663 | 0 | G | A | 7.4% | 343.4 / 11.6 | 118 | intergenic (+70/‑63) | PP_0174/PP_0175 | hypothetical protein/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (61/48); new base A (4/5); total (65/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCATACCGCCTT > NC_002947/226515‑226811 | ggAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTgacga < 2:1066683/150‑1 (MQ=255) gAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTgacgac > 2:1378764/1‑150 (MQ=255) gTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAg < 2:780968/150‑1 (MQ=255) tGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAgg < 2:2675024/150‑1 (MQ=255) ggCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAggg < 2:784480/150‑1 (MQ=255) gCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAgggg < 1:604503/150‑1 (MQ=255) ggACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGAt > 1:2827719/1‑150 (MQ=255) ggACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGAt < 1:1512307/150‑1 (MQ=255) gggCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCgg < 1:264847/150‑1 (MQ=255) gTGCAGATGGGCAGCACATTGGCTTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGt > 2:599067/1‑150 (MQ=255) gcagcaCATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAg < 2:1307839/124‑1 (MQ=255) gcagcaCATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAg > 2:1051818/1‑150 (MQ=255) cagcaCATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGt < 1:956104/150‑1 (MQ=255) acaTTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTCTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGc > 2:629055/1‑150 (MQ=255) ccTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTatat > 1:2719445/1‑132 (MQ=255) ccTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTAt > 1:1445853/1‑150 (MQ=255) ccTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACAGTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTatat < 2:2719445/132‑1 (MQ=255) cTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAggg > 1:971971/1‑113 (MQ=255) cTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAggg < 2:971971/113‑1 (MQ=255) ttGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGa < 2:2929286/150‑1 (MQ=255) ttGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGa > 2:2791787/1‑150 (MQ=255) ccATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTTACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAatat < 2:2719677/150‑1 (MQ=255) cATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAAtata < 1:1051818/150‑1 (MQ=255) gAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCggg < 1:2544979/114‑1 (MQ=255) gAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACtt < 1:2791787/150‑1 (MQ=255) gAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACtt > 1:2803451/1‑150 (MQ=255) aaGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTg < 1:459632/150‑1 (MQ=255) ggAAGACCAGATCCATCCCTGAGAATTACTATTAAGTGCTAAATGAAAAATGAACAACAATTAACCAGGCTATCCGTCTCCCCCGGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtct > 2:2652394/1‑150 (MQ=255) gAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACtt > 1:1047858/1‑143 (MQ=255) gAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACtt < 2:1047858/143‑1 (MQ=255) gACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGtt > 1:290657/1‑144 (MQ=255) gACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGtt < 2:290657/144‑1 (MQ=255) gACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTc < 1:599067/150‑1 (MQ=255) cAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTAt < 2:1477820/127‑1 (MQ=255) cAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTAt > 1:1477820/1‑127 (MQ=255) cAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATg > 1:2087418/1‑150 (MQ=255) cAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATg > 2:2232934/1‑150 (MQ=255) catccCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCtt > 2:169588/1‑150 (MQ=255) ccTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtct < 2:1139979/133‑1 (MQ=255) ccTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTtct > 1:1139979/1‑133 (MQ=255) cTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTATCTTCATGTccc > 1:434219/1‑143 (MQ=255) tGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAg < 2:2999885/107‑1 (MQ=255) tGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAg > 1:2999885/1‑107 (MQ=255) gtctttCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTg < 2:2313487/147‑1 (MQ=255) tttCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTgcgc > 2:690351/1‑150 (MQ=255) ttCAGTGCTGACTGAAAAATGAACAACATTTACCGCGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCaa < 2:3022595/150‑1 (MQ=255) ttCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCaa > 2:846079/1‑150 (MQ=255) tCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAgggg > 1:366300/1‑67 (MQ=38) tCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTCGTCAACAgggg < 2:366300/67‑1 (MQ=38) tGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTcag > 2:579661/1‑150 (MQ=255) tGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTcag > 1:1820611/1‑150 (MQ=255) gCTGACTGAAAAATGAACAACATTTAACCAGGCTATCGGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTcagc > 1:2488803/1‑150 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc > 1:2699456/1‑150 (MQ=255) tgaAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGc < 2:1445853/150‑1 (MQ=255) aaaaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCt < 2:2622692/150‑1 (MQ=255) aaaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTgg > 2:3030673/1‑150 (MQ=255) aaTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCATTGGCCTGGt > 1:1241863/1‑150 (MQ=255) aTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTa > 2:1699149/1‑150 (MQ=255) aTGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTGGTCGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTa < 1:980060/150‑1 (MQ=255) acaacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCg > 1:802740/1‑150 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGt > 2:2973849/1‑57 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGt < 1:2973849/57‑1 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTccc < 2:982478/106‑1 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTccc > 1:982478/1‑106 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCt > 1:1013335/1‑122 (MQ=255) aacaTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCt < 2:1013335/122‑1 (MQ=255) aTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCg > 2:1975524/1‑145 (MQ=255) aTTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCg < 1:1975524/145‑1 (MQ=255) aaCCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCaa > 1:2996591/1‑119 (MQ=255) aaCCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCaa < 2:2996591/119‑1 (MQ=255) aCCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCa < 1:2695924/150‑1 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCa < 1:3010876/90‑1 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACt > 1:2845140/1‑150 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACt > 1:46462/1‑150 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACt > 2:1788570/1‑150 (MQ=255) cAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAAAAGACGTGGTTCTCTACATGGGGCTGGAGTTCCGGCTCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACt > 1:2219205/1‑150 (MQ=255) aggttgtCCATCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTATCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTg > 2:1653903/7‑150 (MQ=255) aGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTg > 2:1609005/1‑150 (MQ=255) aGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTg < 1:169588/150‑1 (MQ=255) gCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTggc < 1:3030673/150‑1 (MQ=255) gCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTggc > 1:820983/1‑150 (MQ=255) cTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCACCACTggcg > 2:410164/1‑150 (MQ=255) tATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTggcgg < 1:1813323/150‑1 (MQ=255) aTCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATGGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTggcggc < 2:435531/150‑1 (MQ=255) tCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGgcggcg < 2:2803451/150‑1 (MQ=255) ccGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTCCATGTCCCTAGAGTTTTTGGGTCTTCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGgcgc > 1:362412/1‑150 (MQ=255) gTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCAt > 1:318459/1‑150 (MQ=255) tcccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTgg < 1:821287/67‑1 (MQ=37) tcccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTgg > 2:821287/2‑68 (MQ=37) cccccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCGCCGCCAGTggcgggca < 1:764654/145‑4 (MQ=255) cccccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGCGCCGCCAGTggcgggca > 2:764654/1‑142 (MQ=255) cccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGa > 1:2348232/1‑86 (MQ=255) cccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGa < 2:2348232/86‑1 (MQ=255) cccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTg > 1:1851669/1‑112 (MQ=255) cccccTGTCGTCAACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTg < 2:1851669/112‑1 (MQ=255) ccccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTc > 2:2631890/1‑150 (MQ=255) cccTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCCAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCa > 1:740468/1‑150 (MQ=255) ccTGTTGACGACAGGGGGCTGTTGTGGCTGATTTTTATATTTATGATACTATTAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCAt > 1:1606967/1‑150 (MQ=255) gacgacAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGCCCCTTTATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCATACCGcc < 2:3024376/150‑1 (MQ=255) cgacAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCATACCGCCtt < 2:802740/150‑1 (MQ=255) | GGAGTGGCGGGACCGGGCGGTGCAGATGGGCAGCACATTGGCCTTGACCATGAAGCTGGAAGACCAGATCCATCCCTGAGTATTTCTCTTCAGTGCTGACTGAAAAATGAACAACATTTAACCAGGCTATCCGTCGCCCCCTGTTGACGACAGGGGGATGTCGGGGCGTATATTGATAGTTAGCAAACTATGAATATACTTGGTTCTCTTCATGTCCCTTGATTTCCTGCGCCTGCAAGTCAGCAGTGGCCTGGTAGTCGCTGC‑CCGCCACTGGCGGCGCATCTGTCATACCGCCTT > NC_002947/226515‑226811 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |