Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,198,949 A→T 5.8% intergenic (‑250/+27) ethA ← / ← PP_2806 FAD‑containing monooxygenase EthA/TetR family transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,198,9490AT 5.8% 338.0 / 9.1 118intergenic (‑250/+27)ethA/PP_2806FAD‑containing monooxygenase EthA/TetR family transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base A (53/57);  new base T (4/3);  total (58/60)
Fisher's exact test for biased strand distribution p-value = 7.12e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01

Only 100 of 120 total aligned reads displayed.

ACGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCA  >  NC_002947/3198800‑3199094
                                                                                                                                                     |                                                                                                                                                 
acGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGa                                                                                                                                                   >  1:505017/1‑150 (MQ=255)
acGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGa                                                                                                                                                   <  1:1076384/150‑1 (MQ=255)
       tGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACgcagca                                                                                                                                            >  2:2561044/1‑150 (MQ=255)
       tGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTGCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACgcagca                                                                                                                                            >  1:2506222/1‑150 (MQ=255)
                aGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAAta                                                                                                                                   >  1:1202578/1‑149 (MQ=255)
                    tgatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgt                                                                                                                               <  2:783435/150‑1 (MQ=255)
                     gatTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgtg                                                                                                                              <  1:1880875/150‑1 (MQ=255)
                      atTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTgg                                                                                                                             <  2:2885454/150‑1 (MQ=255)
                           cACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTATGGTAGATATCGTCATCGGAACGTTCGAAGATTTGTGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCt                                                                                                                        >  1:2677770/1‑150 (MQ=255)
                           cACCTGTTACTTAGCCGATCAACGATCAGATTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCt                                                                                                                        <  2:718593/150‑1 (MQ=255)
                              cTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGCTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAg                                                                                                                     >  1:1535878/1‑150 (MQ=255)
                              cTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAg                                                                                                                     >  1:3051498/1‑150 (MQ=255)
                                gTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTa                                                                                                                   >  1:2368772/1‑150 (MQ=255)
                                    cTTCTCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTg                                                                                                               <  2:1318074/150‑1 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              <  2:2042585/150‑1 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              <  1:2721770/150‑1 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              >  1:451942/1‑150 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              >  1:62049/1‑150 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              >  2:3015670/1‑150 (MQ=255)
                                     ttCGCCGATCAACGATCAGACTGAGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCGGCGGCTTGCAGAGCCGGAGGGGGAGGAGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTgg                                                                                                              <  1:546649/150‑1 (MQ=255)
                                             tCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGc                                                                                                      <  2:1846691/150‑1 (MQ=255)
                                              cAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCa                                                                                                     >  1:1161503/1‑150 (MQ=255)
                                               aaCGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACgcagca                                                                                                                                            <  2:1283882/110‑1 (MQ=255)
                                               aaCGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACgcagca                                                                                                                                            >  1:1283882/1‑110 (MQ=255)
                                                aCGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAAc                                                                                                   <  2:2530780/150‑1 (MQ=255)
                                                 cGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTg                                                                                                               >  2:669613/1‑137 (MQ=255)
                                                 cGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTg                                                                                                               <  1:669613/137‑1 (MQ=255)
                                                 cGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACt                                                                                                  <  2:2231143/150‑1 (MQ=255)
                                                      aGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACt                                                                                             <  1:1761847/150‑1 (MQ=255)
                                                             gTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGccac                                                                                                          <  1:2563389/130‑1 (MQ=255)
                                                             gTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGccac                                                                                                          >  2:2563389/1‑130 (MQ=255)
                                                             gTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGc                                                                                      <  1:1861663/150‑1 (MQ=255)
                                                              tCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTggg                                                                                                                            <  2:1239055/111‑1 (MQ=255)
                                                              tCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTggg                                                                                                                            >  1:1239055/1‑111 (MQ=255)
                                                                aGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAgg                                                                                   >  1:2978319/1‑150 (MQ=255)
                                                                 gTCTGGTAGATATCGTCATCGGAACGGTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCCACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGc                                                                                  <  2:586618/150‑1 (MQ=255)
                                                                  tCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGc                                                                                                                                        >  2:1539077/1‑95 (MQ=255)
                                                                  tCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGc                                                                                                                                        <  1:1539077/95‑1 (MQ=255)
                                                                   cTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcgg                                                                                <  2:1161503/150‑1 (MQ=255)
                                                                    tGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTaa                                                                                                                  >  1:1447173/1‑115 (MQ=255)
                                                                    tGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTaa                                                                                                                  <  2:1447173/115‑1 (MQ=255)
                                                                    tGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTaa                                                                                                                  <  2:2977234/115‑1 (MQ=255)
                                                                    tGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTaa                                                                                                                  >  1:2977234/1‑115 (MQ=255)
                                                                     ggTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtc                                                                              >  2:1285004/1‑150 (MQ=255)
                                                                      gTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgtg                                                                                                                              <  1:2633578/101‑1 (MQ=255)
                                                                      gTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgtg                                                                                                                              >  2:2633578/1‑101 (MQ=255)
                                                                      gTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACAAGCAACTTGACTGCCTGGCAGGcggtct                                                                             >  1:1297125/1‑150 (MQ=255)
                                                                           tatCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGCGGGGGCGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGcggtctcgggc                                                                        >  1:2760458/1‑148 (MQ=255)
                                                                             tCGTCATCGGAACGTTCGAAGGGGGGCGCTGAGGCTTTCAGCGCCGGAGGGGGAGTGGAACGCCGTGCAGCGGCGCAGCGCGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACAAGCAACTTGACTGCCTGGCAGGCggtctcggtctc                                                                      >  1:1306741/1‑150 (MQ=255)
                                                                              cGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGgtctcggtctcg                                                                     <  1:2590540/150‑1 (MQ=255)
                                                                               gTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCTGCGTCGCTGCACGGCGat                                                                                                                                     <  2:1955616/85‑2 (MQ=38)
                                                                               gTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCTGCGTCGCTGCACGGCGat                                                                                                                                     >  1:1955616/1‑84 (MQ=38)
                                                                               gTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgt                                                                                                                               >  1:496709/1‑91 (MQ=255)
                                                                               gTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCtgt                                                                                                                               <  2:496709/91‑1 (MQ=255)
                                                                               gTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGtctcggtctcgg                                                                    >  1:1511983/1‑150 (MQ=255)
                                                                                tCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGgtctcggtctcg                                                                     >  1:2495165/1‑148 (MQ=255)
                                                                                tCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGc                                                                   <  1:1285004/150‑1 (MQ=255)
                                                                                     ggAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCa                                                              <  2:1511983/150‑1 (MQ=255)
                                                                                      gAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAg                                                             >  1:869080/1‑150 (MQ=255)
                                                                                       aaCGTTCGCAGTGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGTGGTCGCCGTGCAGCGACGCAGCACGGGGAATCCTGTGCGGCCTCACTAACTGGCCACCAACAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAgg                                                            >  2:1326100/1‑150 (MQ=255)
                                                                                       aaCGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACg                                                                                                                                          <  2:499219/72‑1 (MQ=255)
                                                                                       aaCGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACg                                                                                                                                          >  1:499219/1‑72 (MQ=255)
                                                                                          gtgcGAAGGGGGGAGCGGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCGCGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACGGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGt                                                         <  2:1306741/147‑1 (MQ=255)
                                                                                           ttCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGGCTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTg                                                        >  1:805122/1‑150 (MQ=255)
                                                                                              gAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCAc                                                     >  2:1511645/1‑150 (MQ=255)
                                                                                                      gcgcTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGc                                                                                                                          >  2:839189/1‑73 (MQ=255)
                                                                                                      gcgcTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCg                                             >  1:1310896/1‑150 (MQ=255)
                                                                                                        gcTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTTGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTg                                           >  2:1465811/1‑150 (MQ=255)
                                                                                                        gcTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGccacc                                                                                                         >  1:1130881/1‑88 (MQ=255)
                                                                                                         cTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACt                                                                                                                >  2:1360747/1‑80 (MQ=255)
                                                                                                         cTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACt                                                                                                                <  1:1360747/80‑1 (MQ=255)
                                                                                                         cTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGa                                          <  1:2499172/150‑1 (MQ=255)
                                                                                                         cTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGa                                          <  1:3015670/150‑1 (MQ=255)
                                                                                                          tGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAg                                         >  2:1508988/1‑150 (MQ=255)
                                                                                                           gCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGc                                        <  2:2014086/150‑1 (MQ=255)
                                                                                                            cGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCg                                       >  2:2161221/1‑150 (MQ=255)
                                                                                                              gCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGa                                     <  2:2741648/150‑1 (MQ=255)
                                                                                                              gCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGa                                     <  2:2360747/150‑1 (MQ=255)
                                                                                                               cTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGAc                                    >  1:866188/1‑150 (MQ=255)
                                                                                                               cTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGAc                                    <  1:1511645/150‑1 (MQ=255)
                                                                                                                 ttCAGCGGCGGAGGGGGAGGGGATCGACGTGCAGGGACGCAGCACGGTGAATCCTGTGGGGCGTCAGTAACTGGCCAACAGCAACTTGACTGCCTCGCGGCCGATCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCa                                  <  2:1202578/150‑1 (MQ=255)
                                                                                                                 ttCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACCGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCa                                  <  2:505017/150‑1 (MQ=255)
                                                                                                                   cAGAGCCGGAGGGGGAGGGGATCGCCGTGCTGCGTCGCTGCACg                                                                                                                                          <  2:1662600/44‑1 (MQ=18)
                                                                                                                   cAGAGCCGGAGGGGGAGGGGATCGCCGTGCTGCGTCGCTGCACg                                                                                                                                          >  1:1662600/1‑44 (MQ=18)
                                                                                                                     gagCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCg                              >  1:926387/1‑150 (MQ=255)
                                                                                                                     gagCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCg                              <  1:1508988/150‑1 (MQ=255)
                                                                                                                             gggggaggggATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAg                      <  1:876260/150‑1 (MQ=255)
                                                                                                                                ggaggggaTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGcc                   >  1:1414178/1‑150 (MQ=255)
                                                                                                                                  aggggaTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGt                 >  1:232735/1‑150 (MQ=255)
                                                                                                                                   ggggaTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTc                <  2:2506222/150‑1 (MQ=255)
                                                                                                                                    gggaTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCg               >  2:1317256/1‑150 (MQ=255)
                                                                                                                                      gaTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGaa             >  1:874743/1‑150 (MQ=255)
                                                                                                                                       aTCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAAc            <  2:451942/150‑1 (MQ=255)
                                                                                                                                          gCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGa         >  1:639105/1‑150 (MQ=255)
                                                                                                                                           ccGTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGAt        >  1:1124369/1‑150 (MQ=255)
                                                                                                                                             gTGCTGCGTCGCTGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCg                                       <  1:1286696/117‑1 (MQ=255)
                                                                                                                                                 aGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGc                                                                                           <  1:720666/61‑1 (MQ=255)
                                                                                                                                                 aGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGc                                                                                           >  2:720666/1‑61 (MQ=255)
                                                                                                                                                 aGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCa  <  2:2978319/150‑1 (MQ=255)
                                                                                                                                                 aGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGCCGGTCTAGGTCTTGGCCTCCAGGCGTACATGTGGGTCGTGGGCGTACCATTCGAGCAGCAGGCCGTCGAACAGATTGATCa  >  2:189711/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
ACGTCACTGCTATTTCAGGATGATTTGCACCTGTTACTTCGCCGATCAACGATCAGACTGGGTCAGTCTGGTAGATATCGTCATCGGAACGTTCGAAGGGGGGCGCTGCGGCTTTCAGAGCCGGAGGGGGAGGGGATCGCCGTGCAGCGACGCAGCACGGCGAATCCTGTGGGGCCTCAGTAACTGGCCACCAGCAACTTGACTGCCTGGCAGGCGGTCTCGGTCTCGGCCTCCAGGCGTGCACGGTCGCCGTGAGCGGACCAGGCGAGCATCAGGCCGTCGAACAGATTGATCA  >  NC_002947/3198800‑3199094

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑