Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,204,793 G→A 5.4% P18P (CCG→CCA)  PP_2811 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,204,7930GA 5.4% 277.5 / 3.0 91P18P (CCG→CCA) PP_2811hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (48/38);  new base A (3/2);  total (51/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

ACAGTGGCAACCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTCCGGCTGC  >  NC_002947/3204644‑3204940
                                                                                                                                                     |                                                                                                                                                   
aCAGTGGCAACCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCg                                                                                                                                                     >  1:2377669/1‑150 (MQ=255)
 cAGTGGCAACCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGt                                                                                                                                                    <  1:2321536/150‑1 (MQ=255)
  aGTGGCAACCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGtt                                                                                                                                                   <  2:718281/150‑1 (MQ=255)
    tGGCAACCCTCGCCTGAAGCGCGACTTCTTCGCCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTgg                                                                                                                                                 >  2:1888851/1‑150 (MQ=255)
        aaCCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAAt                                                                                                                                             >  1:1020775/1‑150 (MQ=255)
        aaCCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAAt                                                                                                                                             >  1:869239/1‑150 (MQ=255)
        aaCCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAAt                                                                                                                                             >  2:2556399/1‑150 (MQ=255)
         aCCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATg                                                                                                                                            <  2:2096804/150‑1 (MQ=255)
          cccTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATgg                                                                                                                                           >  2:2811535/1‑150 (MQ=255)
           ccTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGCGCCAGGATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATggg                                                                                                                                          >  1:54158/1‑150 (MQ=255)
           ccTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATggg                                                                                                                                          >  2:2377992/1‑150 (MQ=255)
           ccTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTAAGGCCTTTTCATCGTGTGCGCAACACAGTTGATAATggg                                                                                                                                          >  1:757796/1‑150 (MQ=255)
            cTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATgggg                                                                                                                                         <  1:1858626/150‑1 (MQ=255)
                ccTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCa                                                                                                                                     <  2:1852954/150‑1 (MQ=255)
                ccTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCa                                                                                                                                     <  1:2858720/150‑1 (MQ=255)
                 cTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCAc                                                                                                                                    >  1:1965299/1‑150 (MQ=255)
                   gAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTc                                                                                                                                      >  2:1093202/1‑146 (MQ=255)
                   gAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTc                                                                                                                                      <  1:1093202/146‑1 (MQ=255)
                      gcgcGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTg                                                                                                                               >  2:446589/1‑150 (MQ=255)
                      gcgcGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCAAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTg                                                                                                                               >  2:732858/1‑150 (MQ=255)
                         cgACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTgaaa                                                                                                                            >  1:1088268/1‑150 (MQ=255)
                               cttcACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTgaaaccgaaa                                                                                                                      <  2:2377669/150‑1 (MQ=255)
                                    ccTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTc                                                                                                                 <  2:1059273/150‑1 (MQ=255)
                                     cTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCa                                                                                                                >  2:746631/1‑150 (MQ=255)
                                     cTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCa                                                                                                                >  1:792550/1‑150 (MQ=255)
                                      tCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCaa                                                                                                               >  2:45046/1‑150 (MQ=255)
                                      tCGGATAACCTGCGAGCCATCAGCGAGCGATAAATCCTACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCaa                                                                                                               <  2:1020775/150‑1 (MQ=255)
                                       cGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAAt                                                                                                              <  2:1958129/150‑1 (MQ=255)
                                       cGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAAt                                                                                                              <  1:2811535/150‑1 (MQ=255)
                                        ggATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATg                                                                                                             <  1:1888851/150‑1 (MQ=255)
                                         gATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATgg                                                                                                            >  2:777682/1‑150 (MQ=255)
                                          aTAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCATGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATg                                                                                                                                            >  1:819858/1‑117 (MQ=255)
                                          aTAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCATGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATg                                                                                                                                            <  2:819858/117‑1 (MQ=255)
                                            acccTTCGAGCCATAAGCGAGCGCTAAACCCGACCTCAGATGGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTc                                                                                                         <  1:2160564/148‑1 (MQ=255)
                                            aaCCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTc                                                                                                         <  1:45046/150‑1 (MQ=255)
                                             aCCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTcc                                                                                                        <  2:1965299/150‑1 (MQ=255)
                                              ccTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCt                                                                                                       <  2:792550/150‑1 (MQ=255)
                                                  cGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGa                                                                                                   <  1:777682/150‑1 (MQ=255)
                                                   gAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGa                                                                                                   <  1:821947/149‑1 (MQ=255)
                                                   gAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGa                                                                                                   >  2:821947/1‑149 (MQ=255)
                                                      ccATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTgaaaccgaaac                                                                                                                     >  1:1935877/1‑128 (MQ=255)
                                                      ccATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTgaaaccgaaac                                                                                                                     <  2:1935877/128‑1 (MQ=255)
                                                        aTCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTccac                                                                                             >  1:2606157/1‑150 (MQ=255)
                                                        aTCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTccac                                                                                             >  1:2401008/1‑150 (MQ=255)
                                                         tCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAGTGGTTCCTTCGACTccacc                                                                                            >  2:2016607/1‑150 (MQ=255)
                                                             cgagcgCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCa                                                                                        <  1:746631/150‑1 (MQ=255)
                                                                                   aTCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTAc                                                                  >  2:846914/1‑150 (MQ=255)
                                                                                   aTCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTAc                                                                  <  1:2377992/150‑1 (MQ=255)
                                                                                               cATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACgg                                                                >  1:2629635/1‑140 (MQ=255)
                                                                                               cATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACgg                                                                <  2:2629635/140‑1 (MQ=255)
                                                                                               cATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgggg                                                      <  1:2556399/150‑1 (MQ=255)
                                                                                               cATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgggg                                                      >  2:1524192/1‑150 (MQ=255)
                                                                                                aTGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGc                                                     >  2:874833/1‑150 (MQ=255)
                                                                                                  gAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTg                                                   >  1:745122/1‑150 (MQ=255)
                                                                                                   aaaaaaaTAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGc                                                  >  2:1268716/1‑150 (MQ=255)
                                                                                                   aaaaaaaTAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGc                                                  >  1:1093708/1‑150 (MQ=255)
                                                                                                     aaaaaTAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCaa                                                <  1:105109/150‑1 (MQ=255)
                                                                                                         ataatTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTg                                            <  1:1268716/150‑1 (MQ=255)
                                                                                                          taatTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGa                                           <  1:2016607/150‑1 (MQ=255)
                                                                                                           aatTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGAt                                          <  2:54158/150‑1 (MQ=255)
                                                                                                             ttACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCa                                        >  1:2269274/1‑150 (MQ=255)
                                                                                                             ttACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCa                                        >  2:2773492/1‑150 (MQ=255)
                                                                                                                  aaaGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAg                                   >  2:1997653/1‑150 (MQ=255)
                                                                                                                     gCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAgggg                                <  1:1997653/150‑1 (MQ=255)
                                                                                                                       gTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgg                                                        >  2:1648833/1‑124 (MQ=255)
                                                                                                                       gTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgg                                                        <  1:1648833/124‑1 (MQ=255)
                                                                                                                        tCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTcc                                                                                                        >  2:342596/1‑75 (MQ=255)
                                                                                                                        tCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTcc                                                                                                        <  1:342596/75‑1 (MQ=255)
                                                                                                                          aGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGt                                                                    >  1:2160996/1‑109 (MQ=255)
                                                                                                                          aGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGt                                                                    <  2:2160996/109‑1 (MQ=255)
                                                                                                                            gCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGa                                           >  2:2267206/1‑132 (MQ=255)
                                                                                                                            gCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGa                                           <  1:2267206/132‑1 (MQ=255)
                                                                                                                            gCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCg                         >  2:2062624/1‑150 (MQ=255)
                                                                                                                             ccTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCgg                        >  1:1564127/1‑150 (MQ=255)
                                                                                                                             ccTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCgg                        >  2:107330/1‑150 (MQ=255)
                                                                                                                              cTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCggg                       >  2:2798802/1‑150 (MQ=255)
                                                                                                                              cTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCggg                       <  2:869239/150‑1 (MQ=255)
                                                                                                                              cTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCggg                       >  2:453428/1‑150 (MQ=255)
                                                                                                                                tGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgg                                                        >  1:186303/1‑115 (MQ=255)
                                                                                                                                tGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCgg                                                        <  2:186303/115‑1 (MQ=255)
                                                                                                                                 gTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGcac                    >  1:794731/1‑150 (MQ=255)
                                                                                                                                        aaaggtgaaCCCCATTGCCAACGGGGTNCACCTTTGAAACNGAAACCNTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGc             >  1:2759517/8‑150 (MQ=255)
                                                                                                                                          tgCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGccc           >  1:1647626/1‑150 (MQ=255)
                                                                                                                                          aggtgaaCCCCATTGCCAACGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAAc                                      <  1:2033801/118‑1 (MQ=255)
                                                                                                                                          aggtgaaCCCCATTGCCAACGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAAc                                      >  2:2033801/6‑123 (MQ=255)
                                                                                                                                            gtgaaCCCCATTGCCAACGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGAcc                          >  2:817122/4‑133 (MQ=255)
                                                                                                                                            gtgaaCCCCATTGCCAACGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGAcc                          <  1:817122/130‑1 (MQ=255)
                                                                                                                                             gcAACCCCGTTGGCCATGGGGGTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTcc        >  2:2575347/1‑150 (MQ=255)
                                                                                                                                             gcAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTcc        >  1:993033/1‑150 (MQ=255)
                                                                                                                                               aaCCCCGTTGGCAATGGCGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGCCTGCAACCTGATAAACCAGGTGCCGACCGGGCACGTTGTGcccggtcg      <  2:757796/150‑6 (MQ=255)
                                                                                                                                                  cccGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTCCGGATg   >  2:2805861/1‑150 (MQ=255)
                                                                                                                                                   ccGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTCCGGCTGc  <  1:2062624/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                   
ACAGTGGCAACCCTCGCCTGAAGCGCGACTTCTTCACCTCGGATAACCTGCGAGCCATCAGCGAGCGCTAAAACCGACGTCAGATCGAGAGCCAGCATGAAAAAAATAATTACGAAAGCGTCAGGCCTTGTCATCGTGTGCGCAACCCCGTTGGCAATGGGGTTCACCTTTGAAACCGAAACCCTCAATGGTTCCTTCGACTCCACCATCACCGCAGGCATGGGCCTGCGTACGGAGTCGCGGGGCTGCAACCTGATCAACCAGGGGCCGACCGGGCACAACGTGCCCTCCGGCTGC  >  NC_002947/3204644‑3204940

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑