Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,337,829 G→C 8.7% S330S (TCG→TCC) ‡ PP_2934 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,337,8290GC 8.7% 396.7 / 24.1 127S330S (TCG→TCC) ‡PP_2934hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (62/54);  new base C (6/5);  total (68/59)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01

Only 100 of 133 total aligned reads displayed.

GGGCATTTCGTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCGGCAA  >  NC_002947/3337680‑3337978
                                                                                                                                                      |                                                                                                                                                      
gggCATTTCGTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCg                                                                                                                                                        >  1:459767/1‑150 (MQ=255)
gggCATTTCGTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCg                                                                                                                                                        >  2:1090836/1‑150 (MQ=255)
      ttCGTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAgcg                                                                                                                                                  <  2:291682/150‑1 (MQ=255)
         gTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCC‑GGC‑GCTGGCGACCCCAGCGcctg                                                                                                                                              <  2:971690/150‑3 (MQ=255)
          tATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑gg                                                                                                                                             >  2:1080938/1‑150 (MQ=255)
           aTTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGc                                                                                                                                            <  2:385714/150‑1 (MQ=255)
                  gCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGt                                                                                                                                     >  1:2897353/1‑150 (MQ=255)
                    ccACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTc                                                                                                                                   >  2:2723758/1‑150 (MQ=255)
                    ccACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCC‑GGC‑GCTGGCGACCCCAGCGCCTGGCTGaa                                                                                                                                        <  2:2192739/145‑2 (MQ=38)
                     cACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCa                                                                                                                                  <  1:510090/150‑1 (MQ=255)
                     cACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCa                                                                                                                                  >  2:2394618/1‑150 (MQ=255)
                     cACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCa                                                                                                                                  >  2:2579541/1‑150 (MQ=255)
                      aCTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAg                                                                                                                                 >  1:1475129/1‑150 (MQ=255)
                          cGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGc                                                                                                                             <  2:337927/150‑1 (MQ=255)
                            aTGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGa                                                                                                                           <  2:2529574/150‑1 (MQ=255)
                             tGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGAc                                                                                                                          <  1:632378/150‑1 (MQ=255)
                             tGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCCAc                                                                                                                          >  2:226635/1‑150 (MQ=255)
                              gCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGcc                                                                                                                                                      >  1:1064035/1‑122 (MQ=255)
                               ccGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACgg                                                                                                                        <  1:1080938/150‑1 (MQ=255)
                                       tACGCGCGAATACCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACggg                                                                                                                       <  1:2095640/143‑1 (MQ=255)
                                       tACGCGCGAATACCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACggg                                                                                                                       >  2:2095640/1‑143 (MQ=255)
                                          gcgcgAATGCCGGCGGTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGcgcgccgcga                                                                                                             <  2:493716/150‑2 (MQ=255)
                                          gcgcgAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTc                                                                                                                                   <  1:255883/128‑1 (MQ=255)
                                          gcgcgAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGcgcgccgcgc                                                                                                             >  2:253321/1‑150 (MQ=255)
                                            gcgAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACgg                                                                                                                        <  2:1273751/137‑1 (MQ=255)
                                            gcgAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCAAGCGCC‑GGCTGAGCGTTCAGCTGCGACgg                                                                                                                        >  1:1273751/1‑137 (MQ=255)
                                                 tGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCgcgccgcgcccaggaa                                                                                                      <  2:976978/150‑7 (MQ=255)
                                                        gcTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTa                                                                                               <  1:2399442/150‑1 (MQ=255)
                                                          tgtgCAAGGGCGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCGGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAgg                                                                                             <  1:2736443/150‑1 (MQ=255)
                                                          tgtgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGc                                                                                                                                       >  1:1324179/1‑108 (MQ=255)
                                                          tgtgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGc                                                                                                                                       <  2:1324179/108‑1 (MQ=255)
                                                          tgtgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAgg                                                                                             >  1:394400/1‑150 (MQ=255)
                                                          tgtgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAgg                                                                                             <  2:2787784/150‑1 (MQ=255)
                                                           gtgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGc                                                                                            >  2:955778/1‑150 (MQ=255)
                                                            tgCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGcc                                                                                           >  2:462858/1‑150 (MQ=255)
                                                               aaGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGGGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGAc                                                                                        >  1:650160/1‑150 (MQ=255)
                                                                 ggACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGAccc                                                                                      >  1:272960/1‑150 (MQ=255)
                                                                       cGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCa                                                                                <  2:2044133/150‑1 (MQ=255)
                                                                         aCGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAg                                                                              <  1:378357/150‑1 (MQ=255)
                                                                           ggCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACaa                                                                                                    <  1:1838042/126‑1 (MQ=255)
                                                                           ggCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACaa                                                                                                    >  2:1838042/1‑126 (MQ=255)
                                                                             cGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCgccag                                                                                                          >  2:1009250/1‑118 (MQ=255)
                                                                             cGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCgccag                                                                                                          <  1:1009250/118‑1 (MQ=255)
                                                                             cGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGa                                                                          >  2:1061894/1‑150 (MQ=255)
                                                                              gTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCGACAAAGTTGGGCACGCCCCGGGCAAGCCGAg                                                                         >  2:1426355/1‑150 (MQ=255)
                                                                              gTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAg                                                                         >  1:888511/1‑150 (MQ=255)
                                                                                  aCCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAgg                                                                     >  1:1053781/1‑150 (MQ=255)
                                                                                      ccgGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAg                                                                 >  1:2180285/1‑150 (MQ=255)
                                                                                         gTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCa                                                              <  1:2061029/150‑1 (MQ=255)
                                                                                               ccATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCgccagcca                                                                                                       >  2:270331/1‑103 (MQ=255)
                                                                                                catcatTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCcacaca                                                          <  2:1487058/147‑1 (MQ=255)
                                                                                                catcatTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCAcaca                                                          >  1:1487058/1‑144 (MQ=255)
                                                                                                catcatTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCagaa                                                       >  1:787461/1‑150 (MQ=255)
                                                                                                catcatTCGCTGCAGCGAGAAACGGCAGCGTCAAGCAG‑AAGGCGGCTTGGGTCGCCATCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCagaa                                                       <  1:687015/150‑1 (MQ=255)
                                                                                                 atcatTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCgccagc                                                                                                         >  1:2411732/1‑99 (MQ=255)
                                                                                                 atcatTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCgccagc                                                                                                         <  2:2411732/99‑1 (MQ=255)
                                                                                                   catTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGGCGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGAt                                                    >  2:2400186/1‑150 (MQ=255)
                                                                                                         cTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGc                                              >  1:1184309/1‑150 (MQ=255)
                                                                                                         cTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGc                                              <  2:787461/150‑1 (MQ=255)
                                                                                                         cTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGc                                              <  1:955778/150‑1 (MQ=255)
                                                                                                           gCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCAt                                            >  1:2468304/1‑150 (MQ=255)
                                                                                                            cAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCTCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATa                                           >  1:2882271/1‑150 (MQ=255)
                                                                                                             aGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATAc                                          <  1:1188138/150‑1 (MQ=255)
                                                                                                               cGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGTTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCacagga                                        <  1:2410952/150‑6 (MQ=255)
                                                                                                               cGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATAccc                                        >  2:2530426/1‑150 (MQ=255)
                                                                                                                tagaAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATAcccc                                       >  1:893182/2‑150 (MQ=255)
                                                                                                                gagaAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGTCGTGCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATAcccc                                       >  1:968941/1‑150 (MQ=255)
                                                                                                                gagaAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATAcccc                                       >  2:2182687/1‑150 (MQ=255)
                                                                                                                 agaAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGACACGCAGAAGATCGAGGCATACCCCa                                      >  1:1946365/1‑150 (MQ=255)
                                                                                                                   aaaCGCCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAgg                                    <  1:515022/150‑1 (MQ=255)
                                                                                                                    aaCGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGgt                                   <  1:253321/150‑1 (MQ=255)
                                                                                                                      cGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCa                                                                  <  1:1746735/117‑1 (MQ=255)
                                                                                                                       ggCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCTCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTa                                <  2:2882271/150‑1 (MQ=255)
                                                                                                                         cAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGTCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCGGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTAcc                              <  2:1013331/150‑1 (MQ=255)
                                                                                                                          aGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAgg                                                                     <  2:735127/110‑1 (MQ=255)
                                                                                                                             gTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGa                                                 >  1:224612/1‑127 (MQ=255)
                                                                                                                             gTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGa                                                 <  2:224612/127‑1 (MQ=255)
                                                                                                                              ttcttcAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTTAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCAc                         >  1:2845781/1‑150 (MQ=255)
                                                                                                                              ttcttcAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCAc                         >  1:1896164/1‑150 (MQ=255)
                                                                                                                               cgctcAGCC‑GGC‑GCTGGCGACCCCAGCGCC‑TGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTAc                               >  2:1651681/4‑142 (MQ=255)
                                                                                                                               cgctcAGCC‑GGC‑GCTGGCGACCCCAGCGCC‑TGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTAc                               <  1:1651681/139‑1 (MQ=255)
                                                                                                                                gctcAGCC‑GGC‑GCTGGCGACCCCAGCGCC‑TGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAgg                                                                             <  1:3041133/93‑1 (MQ=37)
                                                                                                                                gctcAGCC‑GGC‑GCTGGCGACCCCAGCGCC‑TGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAgg                                                                             >  2:3041133/3‑95 (MQ=25)
                                                                                                                                 ttcAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGgc                      >  2:1223027/1‑150 (MQ=255)
                                                                                                                                  tcAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGgcg                     >  2:2417644/1‑150 (MQ=255)
                                                                                                                                  tcAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGgcg                     <  1:2530426/150‑1 (MQ=255)
                                                                                                                                     gCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGGTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGAACGAGGCATACCCCAGCTGTACCGCCACGGCGccc                  <  2:650160/150‑1 (MQ=255)
                                                                                                                                     gCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGccc                  >  2:2469432/1‑150 (MQ=255)
                                                                                                                                     gCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGccc                  <  2:1896164/150‑1 (MQ=255)
                                                                                                                                      gcAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGACCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCa                 >  2:1825377/2‑150 (MQ=255)
                                                                                                                                      ccAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAg                                                                         >  2:1675580/1‑94 (MQ=255)
                                                                                                                                       cAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACACGGGACAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCAt                >  1:1136390/1‑150 (MQ=255)
                                                                                                                                             gcTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGACCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCg           <  1:1825377/150‑1 (MQ=255)
                                                                                                                                              cTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCgg          <  1:1426355/150‑1 (MQ=255)
                                                                                                                                               tGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCggg         >  2:2037038/1‑150 (MQ=255)
                                                                                                                                                 gggTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGACTGCAGTGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACAGCCACGGCGCCCATCACCGGGcc       >  1:969297/1‑150 (MQ=255)
                                                                                                                                                   gTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCgg     >  1:1925673/1‑150 (MQ=255)
                                                                                                                                                   gTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCgg     <  1:2723758/150‑1 (MQ=255)
                                                                                                                                                      gCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCGGCaa  <  1:2400186/150‑1 (MQ=255)
                                                                                                                                                      gCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCGGCaa  <  2:888511/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                      
GGGCATTTCGTATTCATGGCCCACTGCGATGCCGAGCAGTACGCGCGAATGCCGGCGCTGTGCAAGGACGCCGACGGCGTCGACCGCCGGTATATCCATCATTCGCTGCAGCGAGAAACGGCAGCGTTCTTCAGCCAGGC‑GCTGGGGTCGCCAGCGCC‑GGCTGAGCGTTCAGCTGCGACGGGCGCGCCGCGCCAGCCACAACGTTAGGCCGACCCCGGCCAAGGCGAGCAGGGCAGCCACGCAGAAGATCGAGGCATACCCCAGGTGTACCGCCACGGCGCCCATCACCGGGCCGGCAA  >  NC_002947/3337680‑3337978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑