| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,628,125 | C→G | 6.5% | intergenic (+11/‑129) | PP_3198 → / → PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,628,125 | 0 | C | G | 6.5% | 551.2 / 24.2 | 169 | intergenic (+11/‑129) | PP_3198/PP_3199 | 2Fe‑2S ferredoxin/monooxygenase |
| Reads supporting (aligned to +/- strand): ref base C (75/83); new base G (5/6); total (80/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.30e-01 | |||||||||||
Only 100 of 183 total aligned reads displayed.
CTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACGTG > NC_002947/3627976‑3628274 | cTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgcc > 2:2758119/1‑150 (MQ=255) gCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATcgcgccgcgc > 1:2392794/1‑150 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa > 1:2991275/1‑150 (MQ=255) ccACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGa < 2:1659287/150‑1 (MQ=255) cACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGAt < 1:2758119/150‑1 (MQ=255) aCGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCTGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATa < 1:1181817/150‑1 (MQ=255) cGGCGCGCGCTTCACGCCCGAAGCCGGCCTCTGCGTACATGGCTCCTGCTGAGGAGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAg < 2:1695081/150‑1 (MQ=255) cGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAg < 1:945143/150‑1 (MQ=255) ggCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAgg < 2:1096768/150‑1 (MQ=255) gcTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATc > 1:660017/1‑150 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAGGTcagcgatc < 2:855527/150‑8 (MQ=255) ttCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATccc > 2:1934010/1‑150 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAg < 1:183911/135‑1 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAg > 2:183911/1‑135 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAg < 2:913488/135‑1 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCcgcgac < 2:330682/150‑1 (MQ=255) gCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCcgcgac > 1:1468409/1‑150 (MQ=255) cGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCcgcgacgcg > 2:749902/1‑150 (MQ=255) ggCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCcgcgacgcga < 2:1638486/144‑1 (MQ=255) gCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCa < 2:1666608/150‑1 (MQ=255) cACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCAt < 2:1056697/150‑1 (MQ=255) aCTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATg < 1:1254502/150‑1 (MQ=255) cTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATgg < 1:1347259/150‑1 (MQ=255) ttGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGa > 1:2554997/1‑150 (MQ=255) gTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCgg > 1:1851027/1‑150 (MQ=255) tCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGTGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGgcg > 1:2095342/1‑150 (MQ=255) aCGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCa > 1:1862365/1‑150 (MQ=255) gCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGc > 2:525873/1‑150 (MQ=255) ccacTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCg < 2:997667/147‑1 (MQ=255) cccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCgg > 2:136081/1‑150 (MQ=255) ccTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCggg < 1:2564422/150‑1 (MQ=255) cGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCa > 1:1586919/1‑139 (MQ=255) aGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt < 2:743575/150‑1 (MQ=255) ggCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgtg < 2:1444125/150‑1 (MQ=255) aaGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATa > 2:2399125/1‑150 (MQ=255) aaGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATa < 1:749902/150‑1 (MQ=255) aGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGAt < 1:303592/113‑1 (MQ=255) aGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGAt > 2:303592/1‑113 (MQ=255) aGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAg < 2:1468409/150‑1 (MQ=255) gCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAgg > 1:1306293/1‑150 (MQ=255) gCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATACGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAgg < 2:2967360/150‑1 (MQ=255) ttGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcac > 1:348468/1‑150 (MQ=255) tGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcaca < 1:1517940/150‑1 (MQ=255) tGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcaca < 2:1784624/150‑1 (MQ=255) gAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATg > 2:2898030/1‑114 (MQ=255) gAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATg < 1:2898030/114‑1 (MQ=255) aGGCACTCGATCACAAGGAAGTGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAgga > 1:738026/1‑125 (MQ=255) cTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACgg > 1:1337923/1‑150 (MQ=255) cTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATGGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACgg > 1:675812/1‑150 (MQ=255) gATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgccg > 2:604047/1‑150 (MQ=255) gATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgccg > 1:1233199/1‑150 (MQ=255) tCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCCGCTCGATCGCTGACCTATCGTGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgccgcc < 2:2095342/150‑1 (MQ=255) tCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGc > 2:2641983/1‑134 (MQ=255) cacaAGGAAGCGGGCGGCTTGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGccc < 1:1497664/150‑1 (MQ=255) cacaAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGccc < 2:1169105/150‑1 (MQ=255) acaAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGcccc > 1:629709/1‑150 (MQ=255) acaAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGcccc > 1:247100/1‑150 (MQ=255) caAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCGGCGCGATAgg > 2:1532735/1‑73 (MQ=255) ggcggcTGGCTGCTATTGACGCTTGGGCCGTCCGATCGCTGA‑TTATTCAG‑CGCCTCATCCGTCGTTCAGCCGTCGGCGCGATTGTTCATGGACCGGCGCAGGCGGGACGCTGTGCCTAGGCCATGGACACGGCCGCGCCG‑TATTACgggg < 2:675812/150‑1 (MQ=255) ggctggctGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGgcgc < 1:852360/150‑1 (MQ=255) gctggctgCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGca < 2:1212486/150‑1 (MQ=255) cctggctgCTCTTGCCGCTTGAGAAGCTCAATCGCTGACTTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCGTCATG‑CGGGgcggc < 2:723824/149‑3 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGcaca < 2:2165255/114‑1 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCAcaacaa > 2:2562699/1‑150 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCAcaacaa > 2:2723317/1‑150 (MQ=255) tgctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCAATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCAcaacaa > 1:1125284/1‑150 (MQ=255) gctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGgc < 2:1346700/122‑1 (MQ=255) gctATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAg < 2:348468/150‑1 (MQ=255) ctATTGCCGCTTGAGCAGCTCAATCGCTCACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGa < 2:3009435/150‑1 (MQ=255) aTTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAg < 2:1271315/147‑1 (MQ=255) gCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgtg < 2:1249759/94‑1 (MQ=255) gCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGaa > 1:339310/1‑143 (MQ=255) gAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTgag > 2:2887519/1‑150 (MQ=255) gcagcTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGAc > 2:522206/1‑150 (MQ=255) cTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGc > 2:2271962/1‑150 (MQ=255) cTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGc > 1:1812645/1‑150 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt > 2:278997/1‑150 (MQ=255) gATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt > 1:2691219/1‑150 (MQ=255) aTCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATg < 1:2271962/150‑1 (MQ=255) tCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCAt < 1:166643/148‑1 (MQ=255) tGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCtgt > 2:1495677/1‑74 (MQ=255) aCCTATCGCGCGGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg > 1:492181/1‑150 (MQ=255) aCCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGaa > 2:2500750/1‑67 (MQ=255) aCCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtg < 1:214784/150‑1 (MQ=255) ccTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGa < 2:967094/120‑1 (MQ=255) ccTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACtgt > 2:1703994/1‑150 (MQ=255) ccTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCAG‑CATGACGGGGCGCACAACAAGa > 1:967094/1‑120 (MQ=255) cTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGGCATGCGATGAATTCtgtg > 2:2480186/1‑150 (MQ=255) cTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCa > 1:2250742/1‑139 (MQ=255) cTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCa < 2:2250742/139‑1 (MQ=255) tATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGa > 1:2816209/1‑150 (MQ=255) aTCGCGCGGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTga < 1:1078421/128‑1 (MQ=255) aTCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaa < 1:525873/150‑1 (MQ=255) tCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAAc > 1:1439225/1‑84 (MQ=255) tCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGt > 1:276012/1‑125 (MQ=255) tCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaac > 2:2770022/1‑150 (MQ=255) gcgccgcgcGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaacaa > 1:1719749/1‑150 (MQ=255) gcgccgcgcGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAAGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGaacaa > 1:1327850/1‑150 (MQ=255) gccgcgcGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACg < 2:1306293/150‑1 (MQ=255) cgcgcgATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACgtg > 2:1025293/1‑150 (MQ=255) | CTACGCCCACGGCGCGCGCTTCACGCCCGAAGACGGCACTTGCGTTCACGGCCCCTGCCGAGGCGAAGCCTTGGAGGCACTCGATCACAAGGAAGCGGGCGGCTGGCTGCTATTGCCGCTTGAGCAGCTCGATCGCTGACCTATCGCGCCGCGCGATAGGTCG‑‑CATCCCGCGACGCGATTGGTCATGGACCGGCGCAGGCGGGAAGCTGTGCATAGGCACAGGAAACGGCCGCCCCG‑CATGACGGGGCGCACAACAAGAACAAAACGTGAGACATGCCATGAATACTGTGAACAACGTG > NC_002947/3627976‑3628274 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |