| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,878,858 | G→C | 6.1% | V217L (GTG→CTG) | mexF → | multidrug RND transporter MexF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,878,858 | 0 | G | C | 6.1% | 373.5 / 13.0 | 115 | V217L (GTG→CTG) | mexF | multidrug RND transporter MexF |
| Reads supporting (aligned to +/- strand): ref base G (51/57); new base C (3/4); total (54/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.66e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
GCTGGCGCGCCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGAAA > NC_002947/3878710‑3879007 | cTGGCGCGCCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTg < 2:1773489/150‑1 (MQ=255) tGGCGCGCCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTgg < 1:396698/150‑1 (MQ=255) gcCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGccgccg < 2:942716/150‑1 (MQ=255) gcCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGAGGGACGGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGccgccg < 1:1572051/150‑1 (MQ=255) tGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGcc > 2:889542/1‑150 (MQ=255) ggcgTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTg > 1:1019250/1‑150 (MQ=255) gcgTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACACGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTgg < 2:2486841/150‑1 (MQ=255) aGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCGGGCTGGACACGAACAACACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCCGCAAATCACATGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGccc < 1:79518/150‑1 (MQ=255) ggTTTGGCATGGGCACATAACCCCTGCGCGTCTGGCTGCACCAGAACAATACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAg < 2:807564/149‑1 (MQ=255) gTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAgg > 1:2477372/1‑150 (MQ=255) tttGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGc > 1:2581464/1‑150 (MQ=255) tGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTc > 2:1792530/1‑150 (MQ=255) tGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTc < 2:2445809/150‑1 (MQ=255) gCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGa < 1:1669516/150‑1 (MQ=255) gCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGa < 1:2293520/150‑1 (MQ=255) tGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCa > 2:2063692/1‑150 (MQ=255) ggCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGc < 2:2273783/150‑1 (MQ=255) cGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGAAGCCTTCCCCAGGCTCGACCAGCtt > 2:1478076/1‑150 (MQ=255) gACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGc > 2:2895434/1‑131 (MQ=255) gACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGc < 1:2895434/131‑1 (MQ=255) gACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTc > 1:1941070/1‑150 (MQ=255) ctactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCa > 2:725466/1‑150 (MQ=255) tactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTggg < 2:1394063/116‑1 (MQ=255) tactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTggg > 1:1394063/1‑116 (MQ=255) tactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAg > 1:2063408/1‑150 (MQ=255) tactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAg > 1:1060754/1‑150 (MQ=255) tactCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGCTGGCCGGCGGCCACCTggcggtt > 1:1396713/1‑115 (MQ=255) ctCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCGCCCAGCTGGCCGGCGGCCACCTggcgg < 2:1144977/117‑4 (MQ=38) ctCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGACAGACCAGCTTCCAGCt > 2:2790644/1‑150 (MQ=255) ctCGCTGCGCCTGTGTCGTAACCTGATCAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCt < 2:2477372/150‑1 (MQ=255) tCGCTGCGCGTCTGGCTGGACGCGAACAACACCGCTTCGCGCAACCTGCCGGCCAGTGATGTGGTCGCGGCAATCCACGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTg > 2:1298910/1‑150 (MQ=255) tCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCCGGTGGCCGCCGGCCAGCAGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTg > 1:32739/1‑150 (MQ=255) cGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCCGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGt < 1:2790644/150‑1 (MQ=255) gCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCAGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTc < 2:32739/150‑1 (MQ=255) tGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATACGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGa > 1:2181191/1‑150 (MQ=255) gcgcGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGAt < 1:2937261/150‑1 (MQ=255) cgcgTCTGGCTGGACCCGCACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATc < 1:2462095/150‑1 (MQ=255) gcgTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCa < 2:1019250/150‑1 (MQ=255) ttccgatctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCaa < 2:2983574/143‑1 (MQ=255) ctggctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATAc < 1:222263/150‑1 (MQ=255) gctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCa < 1:313274/132‑1 (MQ=255) gctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCa > 2:313274/1‑132 (MQ=255) gctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCa < 1:2269305/150‑1 (MQ=255) ctggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCaa < 1:2976631/150‑1 (MQ=255) tggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAg < 2:2063408/150‑1 (MQ=255) tggACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTAGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAg < 1:2690108/150‑1 (MQ=255) gACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATAccc > 2:1030756/1‑145 (MQ=255) gACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATAccc < 1:1030756/145‑1 (MQ=255) aCCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGgcc > 1:1528384/1‑150 (MQ=255) cccGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGgccg > 2:1136330/1‑150 (MQ=255) ccGAACAAGACTGCTTCGCGCAACCTGACGGCCGGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGTTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGgccgc > 1:1413197/1‑150 (MQ=255) ccGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGCTGGCCGGCGGCCacct > 2:1943613/1‑86 (MQ=255) ccGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGCTGGCCGGCGGCCACCt < 1:1943613/89‑1 (MQ=255) aaCAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTg < 2:2581464/150‑1 (MQ=255) aCAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTgg < 2:2495411/150‑1 (MQ=255) aCCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAAc < 1:1838705/150‑1 (MQ=255) cGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGa < 1:2063692/150‑1 (MQ=255) cGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGa < 1:1136330/150‑1 (MQ=255) cGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGAAGAACCG‑ACAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGa > 2:1960769/1‑150 (MQ=255) cTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCTGGACACCTGGGCGCGCCGCCGGCGCGAGGCTCGACCAGCTTCCAGCTGTCGATCAATGCCCAAGGCCGCCTGGTCAACGAgg < 1:1148125/150‑1 (MQ=255) ttCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGa > 1:1511629/1‑150 (MQ=255) gcgcAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAaga < 1:337394/150‑1 (MQ=255) gcgcAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAaga > 1:616519/1‑150 (MQ=255) cgcAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAagag > 2:1742159/1‑150 (MQ=255) aaCCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTc < 2:2546919/150‑1 (MQ=255) cTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTg < 1:1118393/66‑1 (MQ=255) cTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTg > 2:1118393/1‑66 (MQ=255) cTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGaa > 2:1549593/1‑150 (MQ=255) tGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGaaa < 2:49327/150‑1 (MQ=255) aCGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAAc < 1:725466/150‑1 (MQ=255) ggCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAg > 1:2595021/1‑80 (MQ=255) gCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAg > 2:2429911/1‑96 (MQ=255) gCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAg < 1:2429911/96‑1 (MQ=255) gCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAAcatc > 1:1768650/1‑150 (MQ=255) ccAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATGAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAGcatca > 1:2179539/1‑150 (MQ=255) aTGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATcc < 1:889977/150‑1 (MQ=255) ggTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCgcgc < 2:2232509/150‑1 (MQ=255) tCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCg > 1:1653165/1‑150 (MQ=255) cgcgGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCgg < 2:1511629/150‑1 (MQ=255) cgGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTg < 1:889542/150‑1 (MQ=255) ggCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGc > 2:2642134/1‑150 (MQ=255) aaTCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGa > 2:1865734/1‑150 (MQ=255) aaTCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGa > 2:2207698/1‑150 (MQ=255) tCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGgcc > 1:2656879/1‑96 (MQ=255) tCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGgcc < 2:2656879/96‑1 (MQ=255) tCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATg < 1:1792530/150‑1 (MQ=255) tCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATg > 1:1266310/1‑150 (MQ=255) cgcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCTCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAg > 1:59933/1‑108 (MQ=255) cgcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAgg < 2:927281/109‑1 (MQ=255) cgcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAgg > 1:927281/1‑109 (MQ=255) cgcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAg < 2:59933/108‑1 (MQ=255) gcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAg < 2:2791718/107‑1 (MQ=255) gcgAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAg > 1:2791718/1‑107 (MQ=255) aGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCGGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCgaga < 2:193063/150‑1 (MQ=255) aGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCa < 2:141967/150‑1 (MQ=255) ccG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCg > 1:2610634/1‑150 (MQ=255) ggTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGaa < 2:1768650/150‑1 (MQ=255) gTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGTTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGgaa < 1:2891892/150‑1 (MQ=255) gTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGaaa < 2:2048929/150‑1 (MQ=255) gTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGaaa < 1:619818/150‑1 (MQ=255) | GCTGGCGCGCCTGGGCGGCGTAGGCGACGTGCAGCTGTTTGGCATGGGCGACTACTCGCTGCGCGTCTGGCTGGACCCGAACAAGACCGCTTCGCGCAACCTGACGGCCAGTGATGTGGTCGCGGCAATCCGCGAGCAGAACCG‑CCAGGTGGCCGCCGGCCAGCTGGGCGCGCCGCCTGCCCCAGGCTCGACCAGCTTCCAGCTGTCGATCAATACCCAAGGCCGCCTGGTCAACGAGGAAGAGTTCGAAAACATCATCATCCGCGCCGGTGCCGATGGCGAGATCACCCGCCTGAAA > NC_002947/3878710‑3879007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |